EY659290

Overview
NameEY659290
Unique NameEY659290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: YKGC_ECOLI (Probable pyridine nucleotide-disulfide oxidoreductase ykgC OS=Escherichia coli (strain K12) GN=ykgC PE=3 SV=2)

HSP 1 Score: 59.6918 bits (143), Expect = 1.465e-17
Identity = 44/147 (29.93%), Postives = 73/147 (49.66%), Query Frame = 2
Query:   47 DWKKLLQKKTDEILRL-NGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELA---ITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAEI 475
            D+ + +Q+K + +  L N  +  L     + + +G+ + +  + + V + +G  L    + I I TG++    PIPG         S   L+L+ELP    +LGGGYI VEFAS++   GS V +L    L L   D ++   +A I
Sbjct:   63 DFVRAIQRKNEVVNFLRNKNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGN-LEIHGEKIFINTGAQTVVPPIPGITTTPGVYDSTGLLNLKELPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATI 208          

HSP 2 Score: 51.2174 bits (121), Expect = 1.465e-17
Identity = 26/93 (27.96%), Postives = 50/93 (53.76%), Query Frame = 1
Query:  475 LEGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGDGTNRMNPT 753
            L  +G+++     ++ +   E  ++V ++H + +  D +L A+GR P T  L+ +   + V++ GA+ VD    T   +IWA+GD T  +  T
Sbjct:  209 LRDQGVDIILNAHVERISHHENQVQVHSEHAQ-LAVDALLIASGRQPATASLHPENAGIAVNERGAIVVDKRLHTTADNIWAMGDVTGGLQFT 300          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: MERA_PSEFL (Mercuric reductase OS=Pseudomonas fluorescens GN=merA PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.895e-17
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 1
Query:  487 GINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGDGTNR 741
            GI +   T   ++        + T HGE + AD +L ATGRAPNT+ L L A  V V+  GA+ +D   RT+ P+I+A GD T++
Sbjct:  311 GIEVLEHTQASQVAHVNGEFVLTTGHGE-LRADKLLVATGRAPNTRSLALDAPGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTDQ 394          

HSP 2 Score: 51.6026 bits (122), Expect = 1.895e-17
Identity = 41/136 (30.15%), Postives = 64/136 (47.06%), Query Frame = 2
Query:   47 DWKKLL---QKKTDEILRLNGIYKRLLS-NAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAI--TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR 436
            D  KLL   Q + DE+      Y+ +L  N  + +  GE +      + V   +G +   +    L+ATG+     PIPG + +   TS EAL  + +P R  V+G   +A+E A  +  +GS V +L R  L  R
Sbjct:  161 DRSKLLAQQQARVDELRHAK--YEGILDGNPAITVLHGEARFKDDQSLVVRLNEGGEREVTFDRCLVATGASPAVPPIPGLKESPYWTSTEALVSDTIPARLAVIGSSVVALELAQAFARLGSQVTILARSTLFFR 294          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: TRXR2_HUMAN (Thioredoxin reductase 2, mitochondrial OS=Homo sapiens GN=TXNRD2 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.419e-17
Identity = 55/159 (34.59%), Postives = 86/159 (54.09%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQ-RAPIPGQ-ELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAE 472
            DA +YGWEV +    DW+K+ +   + +  LN  ++  L +  VK +  +   V  + V      G ++  SA HI+IATG R +    I G  E  ITSD+   L+E P + +V+G  Y+A+E A    G+G    ++ R  +PLRGFD +M ++V E
Sbjct:  109 DAPNYGWEVAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMR-SIPLRGFDQQMSSMVIE 266          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: MERA_ENTAG (Mercuric reductase OS=Enterobacter agglomerans GN=merA PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.462e-17
Identity = 33/85 (38.82%), Postives = 50/85 (58.82%), Query Frame = 1
Query:  487 GINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGDGTNR 741
            GI +   T   ++   +    + T HGE + AD +L ATGR PNT+ L L+A  V V+  GA+ +D   RT+ P+I+A GD T++
Sbjct:  324 GIEVLEHTQASQVAHMDGEFVLTTTHGE-LRADKLLVATGRTPNTRSLALEAAGVAVNAQGAIVIDKGMRTSSPNIYAAGDCTDQ 407          

HSP 2 Score: 50.0618 bits (118), Expect = 2.462e-17
Identity = 32/107 (29.91%), Postives = 53/107 (49.53%), Query Frame = 2
Query:  122 NAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAI--TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR 436
            N+ + +  GE +      + V+  +G +        L+ATG+     PIPG + +   TS EAL+ + +P+R  V+G   +A+E A  +  +GS V  L R  L  R
Sbjct:  201 NSAITVLHGEARFKDDQSLIVSLNEGGERVVMFDRCLVATGASPAVPPIPGLKESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTALARNTLFFR 307          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_HAMD5 (Soluble pyridine nucleotide transhydrogenase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=sthA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-17
Identity = 47/129 (36.43%), Postives = 68/129 (52.71%), Query Frame = 2
Query:  137 LYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAIT------SDEALSL--EELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMR-AVVAEIWKGGELI 496
            L+ G  + + P ++EV + DGT  + SA HI+IATGSR    P   + +  T      SD  L L  E+ PK  ++ G G I  E+ASI+RG+G  VDL+  +   L   D E+  A+    W  G +I
Sbjct:  112 LFFGHARFIDPYKLEVIRPDGTLNTLSADHIVIATGSR----PYHPESIDFTHPRIYDSDSILELKEEQQPKHIIIYGAGVIGCEYASIFRGLGVKVDLINTRNHLLAFLDQEISDALSYHFWNNGVVI 236          

HSP 2 Score: 40.817 bits (94), Expect = 2.472e-17
Identity = 20/65 (30.77%), Postives = 38/65 (58.46%), Query Frame = 1
Query:  535 EESIKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            ++ + V    G+++ AD + +A GR  NTK L L+ + +  D+   ++V +  +T +  I+AVGD
Sbjct:  249 DQGVVVHLKSGKKVKADCLFYANGRTGNTKELLLENIGLRTDERRFLQVSNLYQTALSHIYAVGD 313          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_BUCAP (Dihydrolipoyl dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=lpdA PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 4.176e-17
Identity = 42/146 (28.77%), Postives = 77/146 (52.74%), Query Frame = 2
Query:   23 EVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            ++ +IN+  WK+ + KK    L   G  +++    G  L+  +  ++  N+           +   KH +IATGS+  + P +P ++  I  S +ALSL+ +P R +++GGG I +E A+I+  +GS VD++ R    L   D ++
Sbjct:   82 DIKKINN--WKEKIIKKLTTGLSNMGEKRKVRIVQGKALFNTDHSVLVKNKKN-------DFTIFFKHAIIATGSKPIKIPSLPNEDNRIWNSTDALSLKSIPNRFLIIGGGIIGLEMATIYSALGSKVDIVDRFNAFLPSVDKDI 218          

HSP 2 Score: 50.0618 bits (118), Expect = 4.176e-17
Identity = 25/81 (30.86%), Postives = 52/81 (64.20%), Query Frame = 1
Query:  508 TTIKELIKSEES---IKVITDHGEEIVA--DVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGDGT 735
            T +K + KS+++   +K+  ++ +E V   D +L A GR+PN   L L+ + ++++++G +E++   +TN+  I+A+GD T
Sbjct:  236 THVKSVEKSKDNDLIVKIAEENSDENVCCYDNILVAIGRSPNVDFLGLEKIGLKLNESGFIEINQQLKTNISHIYAIGDVT 316          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: TRXR2_RAT (Thioredoxin reductase 2, mitochondrial OS=Rattus norvegicus GN=Txnrd2 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 5.390e-17
Identity = 54/159 (33.96%), Postives = 84/159 (52.83%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQ-RAPIPGQ-ELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAE 472
            DA+ YGWEV +    +WK + +   + +  LN  ++  L +  VK +  +   V  + V      G     SAKHI+IATG R +    + G  E  ITSD+   L+E P + +V+G  Y+A+E A    G+G    ++ R  +PLRGFD +M ++V E
Sbjct:  111 DAQHYGWEVAQPVQHNWKAMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVNEHTVHGVDKAGKVTQLSAKHIVIATGGRPKYPTQVKGALEHGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMR-SVPLRGFDQQMASLVTE 268          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: TYTR_TRYCR (Trypanothione reductase OS=Trypanosoma cruzi GN=TPR PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.039e-17
Identity = 58/181 (32.04%), Postives = 94/181 (51.93%), Query Frame = 2
Query:    2 DARSYGWEVHEIN-DFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIVGPNEVEVTQ----LDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMR-AVVAEIWKGGELICTRGLP 514
            ++  +GWE        +WKKL+  K + +L +N  Y+ +  +  G++ + G G +   N V V +        K     ++IL+A+GS      IPG E  I+S+EA  L E P+R + +GGG+I+VEFA I   ++     V L +R E+ LRGFD  +R  +  ++   G  I T+  P
Sbjct:   76 ESAGFGWEFDRTTLRAEWKKLIAVKDEAVLNINKSYEEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAVKERLETENILLASGSWPHMPNIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELTKQLTANGIQILTKENP 256          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: TRXR2_MOUSE (Thioredoxin reductase 2, mitochondrial OS=Mus musculus GN=Txnrd2 PE=1 SV=4)

HSP 1 Score: 87.4261 bits (215), Expect = 1.201e-16
Identity = 53/159 (33.33%), Postives = 83/159 (52.20%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQ-RAPIPGQ-ELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAE 472
            DA  YGWEV +    +WK + +   + +  LN  ++  L +  VK +  +   V  + V      G     SA+HI+IATG R +    + G  E  ITSD+   L+E P + +V+G  Y+A+E A    G+G    ++ R  +PLRGFD +M ++V E
Sbjct:  109 DAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMR-SIPLRGFDQQMSSLVTE 266          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_ZYMMO (Dihydrolipoyl dehydrogenase OS=Zymomonas mobilis GN=lpd PE=3 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 1.551e-16
Identity = 48/150 (32.00%), Postives = 78/150 (52.00%), Query Frame = 2
Query:   41 DFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP---IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAEIWK 481
            DFD  K++ +  +   RL    K LL    V++  G G++ G  ++ V   +G +    AK I+IATG+RA++ P     G+ +  T   AL    +PK+ +V+G G I +EFAS +   G+ V ++      L   D E+ A VA+ +K
Sbjct:   77 DFDLDKIIARSREVATRLASGVKTLLRKNKVEVISGVGQLTGNQQMLVETTEGEEKILEAKDIIIATGARARQLPNVHSDGKHI-WTYHHALKPPAMPKKLLVIGSGAIGIEFASFYADFGAEVSIVEHAPQILPMEDAEVSAYVAKAFK 225          

HSP 2 Score: 36.1946 bits (82), Expect = 1.551e-16
Identity = 22/86 (25.58%), Postives = 41/86 (47.67%), Query Frame = 1
Query:  484 RGINLHPRTTIKELIKSEESIKVITDHGEEIVADV----VLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            RGI +  ++ ++ L   +E +       +  V        + A G   N + + L  + +++D+ G + VD   RTNV  +WA+GD
Sbjct:  227 RGIRILTQSALQNLTPDDEGVTAEIAGADGKVTKERFSHAIVAIGVVANVENIGLDKLGIKLDR-GFIAVDGFGRTNVDHVWAIGD 311          
The following BLAST results are available for this feature:
BLAST of EY659290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
YKGC_ECOLI1.465e-1729.93Probable pyridine nucleotide-disulfide oxidoreduct... [more]
MERA_PSEFL1.895e-1740.00Mercuric reductase OS=Pseudomonas fluorescens GN=m... [more]
TRXR2_HUMAN2.419e-1734.59Thioredoxin reductase 2, mitochondrial OS=Homo sap... [more]
MERA_ENTAG2.462e-1738.82Mercuric reductase OS=Enterobacter agglomerans GN=... [more]
STHA_HAMD52.472e-1736.43Soluble pyridine nucleotide transhydrogenase OS=Ha... [more]
DLDH_BUCAP4.176e-1728.77Dihydrolipoyl dehydrogenase OS=Buchnera aphidicola... [more]
TRXR2_RAT5.390e-1733.96Thioredoxin reductase 2, mitochondrial OS=Rattus n... [more]
TYTR_TRYCR7.039e-1732.04Trypanothione reductase OS=Trypanosoma cruzi GN=TP... [more]
TRXR2_MOUSE1.201e-1633.33Thioredoxin reductase 2, mitochondrial OS=Mus musc... [more]
DLDH_ZYMMO1.551e-1632.00Dihydrolipoyl dehydrogenase OS=Zymomonas mobilis G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659290 ID=EY659290; Name=EY659290; organism=Citrus sinensis; type=EST; length=906bp
AGATGCAAGGAGTTATGGATGGGAGGTACATGAGATAAATGACTTCGACT
GGAAAAAACTTCTGCAAAAGAAGACAGATGAAATACTCAGACTAAATGGA
ATTTACAAGCGATTATTATCTAATGCTGGGGTAAAATTATATGAAGGGGA
GGGAAAGATAGTTGGTCCAAATGAAGTTGAGGTCACACAACTAGATGGCA
CTAAGTTAAGTTACTCAGCAAAGCACATATTGATCGCAACTGGAAGTAGG
GCTCAACGTGCTCCTATTCCTGGCCAGGAGCTGGCTATAACCTCTGACGA
GGCATTGAGCTTGGAAGAATTACCCAAGCGTGCTGTGGTGCTTGGTGGAG
GGTACATTGCTGTTGAGTTTGCTTCCATATGGCGAGGGATGGGTTCTACT
GTGGATCTATTATTTAGAAAGGAACTTCCATTAAGAGGGTTTGATGATGA
AATGCGGGCAGTAGTTGCCGAAATCTGGAAGGGAGGGGAATTAATTTGCA
CCCGAGGACTACCATAAAGGAGTTGATTAAGTCAGAGGAGAGTATAAAAG
TTATTACAGATCATGGTGAAGAGATTGTTGCAGATGTTGTACTCTTTGCC
ACTGGCAGGGCACCTAATACAAAAAGGTTGAATTTGAAAGCTGTTGTGGT
GGAAGTTGATCAAACAGGAGCTGTGGAGGTGGACGATAACTCACGCACCA
ACGTACCTAGTATATGGGCTGTGGGTGATGGAACTAATCGAATGAATCCT
ACCCCTGCGGCTTGATGGAGGGAACATGCTTTGCAAAAACTGTTTTTGGG
GGACACCCTGCAAACCAACTACGGGATGGACCCTGGGCTGGATTTGGCTA
CCTCCTTCTTTGGGAGGGGCCCCATGGAGGGACAGGCCTTAACCAGGAAA
TGGTGT
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