EY659290

Overview
NameEY659290
Unique NameEY659290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_AZOVI (Soluble pyridine nucleotide transhydrogenase OS=Azotobacter vinelandii GN=sthA PE=1 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.551e-16
Identity = 39/110 (35.45%), Postives = 57/110 (51.82%), Query Frame = 2
Query:  131 VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            +  + G       + +EV  L+G   +  AK  +IATGSR  R A +      I  SD  LSL   P+R ++ G G I  E+ASI+ G+G  VDL+  ++  L   DDE+
Sbjct:  109 IDTFFGTASFCDEHTIEVVHLNGMVETLVAKQFVIATGSRPYRPADVDFTHPRIYDSDTILSLGHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDNRDQLLSFLDDEI 218          

HSP 2 Score: 46.9802 bits (110), Expect = 1.551e-16
Identity = 21/55 (38.18%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD  L++ GR  NT +L L+ + ++ +  G ++VD++ RT V +I+A GD
Sbjct:  256 GKKIKADAFLWSNGRTGNTDKLGLENIGLKANGRGQIQVDEHYRTEVSNIYAAGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_AZOVD (Soluble pyridine nucleotide transhydrogenase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=sthA PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.551e-16
Identity = 39/110 (35.45%), Postives = 57/110 (51.82%), Query Frame = 2
Query:  131 VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            +  + G       + +EV  L+G   +  AK  +IATGSR  R A +      I  SD  LSL   P+R ++ G G I  E+ASI+ G+G  VDL+  ++  L   DDE+
Sbjct:  109 IDTFFGTASFCDEHTIEVVHLNGMVETLVAKQFVIATGSRPYRPADVDFTHPRIYDSDTILSLGHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDNRDQLLSFLDDEI 218          

HSP 2 Score: 46.9802 bits (110), Expect = 1.551e-16
Identity = 21/55 (38.18%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD  L++ GR  NT +L L+ + ++ +  G ++VD++ RT V +I+A GD
Sbjct:  256 GKKIKADAFLWSNGRTGNTDKLGLENIGLKANGRGQIQVDEHYRTEVSNIYAAGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: GSHR_RAT (Glutathione reductase (Fragment) OS=Rattus norvegicus GN=Gsr PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.568e-16
Identity = 53/138 (38.41%), Postives = 77/138 (55.80%), Query Frame = 2
Query:   44 FDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIV-GPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFD 445
            F+W  + +K+   + RLN IY+  L+ + +++  G      GP      +++G K  ++A HILIATG   +      IPG  L ITSD    LE+LP R+V++G GYIAVE A I   +GS   L+ R +  LR FD
Sbjct:   36 FNWHVIKEKRDAYVSRLNNIYQNNLTKSHIEVIHGYATFRDGPQPT--AEVNGKK--FTAPHILIATGGVPTVPHENQIPGASLGITSDGFFQLEDLPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRSFD 169          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH3_HALMA (Dihydrolipoyl dehydrogenase 3 OS=Haloarcula marismortui GN=lpdA3 PE=3 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 4.424e-16
Identity = 40/141 (28.37%), Postives = 76/141 (53.90%), Query Frame = 2
Query:   56 KLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAK--HILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVV 466
            +++  K   + +L    ++L + AGV L +G  +    N+V +      + S S K  + +IATGSR    P  G   E  ++SD AL+ + +P   V++G GYI +E A+++  +GS V ++   E  L  +++++ ++V
Sbjct:   86 EMINWKDGVVDQLTSGIEQLCTAAGVNLLKGTAEFADENKVRIIHQGEGQGSESLKFENCIIATGSRPIEIPGFGFEDERIVSSDGALNFDTVPDELVIVGAGYIGMELATVYSRLGSDVSVIEMLEQALPSYEEDIASIV 226          

HSP 2 Score: 42.743 bits (99), Expect = 4.424e-16
Identity = 23/57 (40.35%), Postives = 30/57 (52.63%), Query Frame = 1
Query:  559 DHGEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            D   E+ AD +L A GR P T  L++    VE +  G +  D   RTN   I+AVGD
Sbjct:  266 DSDIELTADRILVAVGRRPVTDTLSIDDAGVETNAQGFIPTDSTCRTNKEHIFAVGD 322          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_ERWT9 (Soluble pyridine nucleotide transhydrogenase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sthA PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 4.427e-16
Identity = 36/124 (29.03%), Postives = 61/124 (49.19%), Query Frame = 2
Query:  134 KLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMR-AVVAEIWKGGELI 496
            ++++G+ + +  N +E+   DG+    +A+  +IA GSR    P           SD  L+L   P   ++ G G I  E+ASI+RG+   VDL+  ++  L   D EM  ++    W  G +I
Sbjct:  111 EIFQGDARFIDANTLEIETHDGSIERLTAEKFVIACGSRPYHPPDVDFTHPRIYDSDSILNLHHEPGHVIIYGAGVIGCEYASIFRGLAVKVDLINTRDRLLAFLDQEMSDSLSYHFWNNGVVI 234          

HSP 2 Score: 46.595 bits (109), Expect = 4.427e-16
Identity = 23/55 (41.82%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G+++ AD +L+A GR  NT  L+L+ V +E D  G ++V+   +T  P+I+AVGD
Sbjct:  257 GKKLKADCLLYANGRTGNTDSLSLENVGLEADGRGLLKVNSMYQTAQPNIYAVGD 311          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_PSEU5 (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=sthA PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 4.427e-16
Identity = 40/110 (36.36%), Postives = 54/110 (49.09%), Query Frame = 2
Query:  131 VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            +  + G         VEV  L+G      A   +IATGSR  R A I      I  SD  L+L   P+R ++ G G I  E+ASI+ G+G  VDL+  +E  L   DDE+
Sbjct:  109 IDTFFGTASFSDEQSVEVVCLNGMVEKLVANQFVIATGSRPYRPADIDFNHPRIYDSDTILTLSHTPRRMIIYGAGVIGCEYASIFSGLGVLVDLIDNREQLLSFLDDEI 218          

HSP 2 Score: 47.3654 bits (111), Expect = 4.427e-16
Identity = 21/55 (38.18%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD  L++ GR  NT +L L+ + ++ +  G V+VD++ RT + +I+A GD
Sbjct:  256 GKKIKADAFLWSNGRTGNTDKLGLENIGLKANSRGQVQVDEHYRTEIGNIYAAGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_HALSA (Dihydrolipoyl dehydrogenase OS=Halobacterium salinarium GN=lpdA PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 5.751e-16
Identity = 39/148 (26.35%), Postives = 76/148 (51.35%), Query Frame = 2
Query:   41 DFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAK--HILIATGSRAQRAP--IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAE 472
            D D  +++  K   + +L G  ++L    GV L EG  +  G +++ V      + S + +  H +++TGSR    P    G +  + S +AL++ ELP   V++GGGYI +E ++++  +G  V ++   +  L  + D++   V +
Sbjct:   81 DVDVAEMVDWKDGVVDQLTGGVEKLCKANGVNLIEGRAEFAGSDKLRVVHGGDGQGSETIEYEHAIVSTGSRPIEVPGFDFGDDPVLDSRQALAMAELPSSMVIVGGGYIGMELSTVFAKLGVDVTVVEMLDGILPQYGDDIARPVRQ 228          

HSP 2 Score: 47.3654 bits (111), Expect = 5.751e-16
Identity = 31/88 (35.23%), Postives = 46/88 (52.27%), Query Frame = 1
Query:  478 EGRGINLHPRTTIKELIKSEESIKVIT--DHGEE--IVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            E  GI+ H          +++ I V    + GEE     + VL A GR P T  LNL AV +E +  G +E D  +RT+V +++A+GD
Sbjct:  231 EELGIDFHFGLAADSWTDTDDGIVVTAADEDGEETEFETEKVLVAVGRQPVTDTLNLDAVGLEPNDDGRLETDHEARTDVENVFAIGD 318          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_ERWCT (Soluble pyridine nucleotide transhydrogenase OS=Erwinia carotovora subsp. atroseptica GN=sthA PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.263e-15
Identity = 41/124 (33.06%), Postives = 63/124 (50.81%), Query Frame = 2
Query:  134 KLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMR-AVVAEIWKGGELI 496
            +L+ GE   +  + + V   D T  + +A +I+IATGSR    A +      I  SD  L L+  P+  ++ G G I  E+ASI+RG+   VDL+  ++  L   D EM  A+    W  G +I
Sbjct:  113 ELFSGEASFIDAHTIAVHYPDNTHETLTAANIIIATGSRPYHPAEVDFNHPRIYDSDSILQLDHEPQHVIIYGAGVIGCEYASIFRGLSVKVDLINTRDRLLAFLDQEMSDALSYHFWNNGVVI 236          

HSP 2 Score: 41.9726 bits (97), Expect = 1.263e-15
Identity = 19/55 (34.55%), Postives = 35/55 (63.64%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G+++ AD +L+A GR  NT+ L L+ + +  D  G ++V+   +T +  I+A+GD
Sbjct:  259 GKKMKADCLLYANGRTGNTETLGLENIGLSTDSRGQLKVNSMYQTALAHIYAIGD 313          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_BUCAI (Dihydrolipoyl dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=lpdA PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.640e-15
Identity = 38/143 (26.57%), Postives = 74/143 (51.75%), Query Frame = 2
Query:   41 DFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAV 463
            D D KK+   K   + +L      +     +++++G         + VT  +  K +    + +IATGS+  + P IP  ++ I  S +ALSL+++P   +++G G I +E A+I+  +GS VD++ R    L   D+++ ++
Sbjct:   80 DIDIKKIKNWKQHIVNKLTDGLSSMRKKRKIRIFQGHAIFETDKSLCVTNTED-KFTIFFDNAIIATGSKPIKIPSIPHDDIRIWDSTDALSLKKIPNNFLIIGSGIIGLEMATIYSALGSKVDIIDRFNHFLPVIDEDISSI 221          

HSP 2 Score: 47.3654 bits (111), Expect = 1.640e-15
Identity = 20/54 (37.04%), Postives = 35/54 (64.81%), Query Frame = 1
Query:  568 EEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            + I+ D VL A GR PN   L L  + ++++  G ++V++  +TN+P I+A+GD
Sbjct:  260 KNILYDAVLVAIGRTPNIDSLGLDRIGLKINNFGFIQVNNQLKTNIPHIYAIGD 313          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_PSE14 (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sthA PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.641e-15
Identity = 38/110 (34.55%), Postives = 54/110 (49.09%), Query Frame = 2
Query:  131 VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            V ++ G G       V V   +G      A  I+IATGSR  R A I      I  SD  LSL   P++ ++ G G I  E+ASI+ G+G  V+L+  ++  L   D E+
Sbjct:  109 VDVFFGTGSFADETSVNVVCSNGVVEKLVANQIIIATGSRPYRPADIDFSHKRIYDSDTILSLGHTPRKLIIYGAGVIGCEYASIFSGLGVLVELVDNRDQLLSFLDSEI 218          

HSP 2 Score: 48.9062 bits (115), Expect = 1.641e-15
Identity = 21/55 (38.18%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD +L+  GR  NT +L L+ + ++ +  G +EVD+N RT+V +++  GD
Sbjct:  256 GKKIKADALLWCNGRTGNTDKLGLENIGLKANGRGQIEVDENYRTSVSNVYGAGD 310          
The following BLAST results are available for this feature:
BLAST of EY659290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
STHA_AZOVI1.551e-1635.45Soluble pyridine nucleotide transhydrogenase OS=Az... [more]
STHA_AZOVD1.551e-1635.45Soluble pyridine nucleotide transhydrogenase OS=Az... [more]
GSHR_RAT1.568e-1638.41Glutathione reductase (Fragment) OS=Rattus norvegi... [more]
DLDH3_HALMA4.424e-1628.37Dihydrolipoyl dehydrogenase 3 OS=Haloarcula marism... [more]
STHA_ERWT94.427e-1629.03Soluble pyridine nucleotide transhydrogenase OS=Er... [more]
STHA_PSEU54.427e-1636.36Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
DLDH_HALSA5.751e-1626.35Dihydrolipoyl dehydrogenase OS=Halobacterium salin... [more]
STHA_ERWCT1.263e-1533.06Soluble pyridine nucleotide transhydrogenase OS=Er... [more]
DLDH_BUCAI1.640e-1526.57Dihydrolipoyl dehydrogenase OS=Buchnera aphidicola... [more]
STHA_PSE141.641e-1534.55Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659290 ID=EY659290; Name=EY659290; organism=Citrus sinensis; type=EST; length=906bp
AGATGCAAGGAGTTATGGATGGGAGGTACATGAGATAAATGACTTCGACT
GGAAAAAACTTCTGCAAAAGAAGACAGATGAAATACTCAGACTAAATGGA
ATTTACAAGCGATTATTATCTAATGCTGGGGTAAAATTATATGAAGGGGA
GGGAAAGATAGTTGGTCCAAATGAAGTTGAGGTCACACAACTAGATGGCA
CTAAGTTAAGTTACTCAGCAAAGCACATATTGATCGCAACTGGAAGTAGG
GCTCAACGTGCTCCTATTCCTGGCCAGGAGCTGGCTATAACCTCTGACGA
GGCATTGAGCTTGGAAGAATTACCCAAGCGTGCTGTGGTGCTTGGTGGAG
GGTACATTGCTGTTGAGTTTGCTTCCATATGGCGAGGGATGGGTTCTACT
GTGGATCTATTATTTAGAAAGGAACTTCCATTAAGAGGGTTTGATGATGA
AATGCGGGCAGTAGTTGCCGAAATCTGGAAGGGAGGGGAATTAATTTGCA
CCCGAGGACTACCATAAAGGAGTTGATTAAGTCAGAGGAGAGTATAAAAG
TTATTACAGATCATGGTGAAGAGATTGTTGCAGATGTTGTACTCTTTGCC
ACTGGCAGGGCACCTAATACAAAAAGGTTGAATTTGAAAGCTGTTGTGGT
GGAAGTTGATCAAACAGGAGCTGTGGAGGTGGACGATAACTCACGCACCA
ACGTACCTAGTATATGGGCTGTGGGTGATGGAACTAATCGAATGAATCCT
ACCCCTGCGGCTTGATGGAGGGAACATGCTTTGCAAAAACTGTTTTTGGG
GGACACCCTGCAAACCAACTACGGGATGGACCCTGGGCTGGATTTGGCTA
CCTCCTTCTTTGGGAGGGGCCCCATGGAGGGACAGGCCTTAACCAGGAAA
TGGTGT
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