EY659290

Overview
NameEY659290
Unique NameEY659290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_PIG (Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus scrofa GN=DLD PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.734e-15
Identity = 49/138 (35.51%), Postives = 79/138 (57.25%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG----QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTV 403
            D  S G E+ E+   + +K++++K++ +  L G    L     V    G GKI G N+V  T+ DG+    + K+ILIATGS     P PG    ++  ++S  ALSL+++P++ VV+G G I VE  S+W+ +G+ V
Sbjct:  105 DFASRGIEMSEVR-LNLEKMMEQKSNAVKALTGGIAHLFKQNKVVRVNGYGKITGKNQVTATKADGSTEVINTKNILIATGSEV--TPFPGITIDEDTVVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADV 239          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_CHRSD (Soluble pyridine nucleotide transhydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=sthA PE=3 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 3.602e-15
Identity = 41/146 (28.08%), Postives = 68/146 (46.58%), Query Frame = 2
Query:   23 EVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            ++ E   F + ++L++    I +   +  +  S   + L+ G  +    + + V           A+  +IATGSR  R A I  +   I  SD  L L   P+  ++ G G I  E+ASI+ G+G  VDL+  +E  L   DDE+
Sbjct:   73 DIGEPRWFSFPRVLERSKVTIDQQVEMRTQFYSRNRINLFFGVARFRDEHTLTVRDNQDGVEELCAQQFVIATGSRPYRPADINFRHPRIYCSDTILGLSHTPRTLIIFGAGVIGSEYASIFSGLGVKVDLIDMRERLLSFLDDEI 218          

HSP 2 Score: 51.2174 bits (121), Expect = 3.602e-15
Identity = 28/86 (32.56%), Postives = 46/86 (53.49%), Query Frame = 1
Query:  472 NLEGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            +L   G+ +      + +   E  + V    G+ + AD  L+A GR  NT  L L+ + +E +  G ++VD++ RT VP I+AVGD
Sbjct:  225 HLRQNGVLVRHNEDYESIEGDESGVIVKLKSGKRLRADAFLWANGRTGNTDELGLENIGLEPNGRGQLQVDEHYRTMVPHIYAVGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_PSEU2 (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sthA PE=3 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 7.902e-15
Identity = 37/110 (33.64%), Postives = 54/110 (49.09%), Query Frame = 2
Query:  131 VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            V ++ G G       + V   +G      A  I+IATGSR  R A I      I  SD  LSL   P++ ++ G G I  E+ASI+ G+G  V+L+  ++  L   D E+
Sbjct:  109 VDVFFGTGSFADETSINVVCTNGVVEKLVANQIIIATGSRPYRPADIDFSHKRIYDSDTILSLGHTPRKLIIYGAGVIGCEYASIFSGLGVLVELVDNRDQLLSFLDSEI 218          

HSP 2 Score: 46.595 bits (109), Expect = 7.902e-15
Identity = 20/55 (36.36%), Postives = 36/55 (65.45%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD +L+  GR  NT +L L+ + ++ +  G +EVD+  RT+V +++  GD
Sbjct:  256 GKKIKADALLWCNGRTGNTDKLGLENIGLKANGRGQIEVDETYRTSVSNVYGAGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_CRIGR (Dihydrolipoyl dehydrogenase, mitochondrial OS=Cricetulus griseus GN=DLD PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.605e-15
Identity = 49/138 (35.51%), Postives = 77/138 (55.80%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG----QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTV 403
            D  S G E+ E+   + +K++++K+  +  L G    L     V    G GKI G N+V  T+ DG+      K+ILIATGS     P PG    ++  ++S  ALSL+++P++ VV+G G I VE  S+W+ +G+ V
Sbjct:  105 DFASRGIELSEVR-LNLEKMMEQKSSAVKALIGGIAHLFKQNKVVHVNGFGKITGKNQVTATKADGSSQVIGTKNILIATGSEV--TPFPGITIDEDTIVSSTGALSLKKVPEKLVVIGAGVIGVELGSVWQRLGADV 239          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_PSESM (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas syringae pv. tomato GN=sthA PE=3 SV=3)

HSP 1 Score: 55.4546 bits (132), Expect = 1.027e-14
Identity = 38/110 (34.55%), Postives = 54/110 (49.09%), Query Frame = 2
Query:  131 VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            V ++ G G       V V   +G      A  I+IATGSR  R A I      I  SD  LSL   P++ ++ G G I  E+ASI+ G+G  V+L+  ++  L   D E+
Sbjct:  109 VDVFFGTGSFADETSVNVVCANGVVEKLVANQIIIATGSRPYRPADIDFSHKRIYDSDTILSLGHTPRKLIIYGAGVIGCEYASIFSGLGVLVELVDNRDQLLSFLDSEI 218          

HSP 2 Score: 45.8246 bits (107), Expect = 1.027e-14
Identity = 20/55 (36.36%), Postives = 36/55 (65.45%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD +L+  GR  NT +L L+ + ++ +  G +EVD+  RT+V +++  GD
Sbjct:  256 GKKIKADALLWCNGRTGNTDKLGLENIGLKANGRGQIEVDEAYRTSVSNVYGAGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_RAT (Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Dld PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.124e-14
Identity = 49/138 (35.51%), Postives = 75/138 (54.35%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG----QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTV 403
            D  S G E+ E+   + +K++++K   +  L G    L     V    G GKI G N+V  T  DG+      K+ILIATGS     P PG    ++  ++S  ALSL+++P++ VV+G G I VE  S+W+ +G+ V
Sbjct:  105 DFASRGIEIPEVR-LNLEKMMEQKRSAVKALTGGIAHLFKQNKVVHVNGFGKITGKNQVTATTADGSTQVIGTKNILIATGSEV--TPFPGITIDEDTIVSSTGALSLKKVPEKLVVIGAGVIGVELGSVWQRLGADV 239          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_MOUSE (Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus GN=Dld PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.124e-14
Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG----QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTV 403
            D  S G E+ E+   + +K++++K   +  L G    L     V    G GKI G N+V  T+ DG+      K+IL+ATGS     P PG    ++  ++S  ALSL+++P++ VV+G G I VE  S+W+ +G+ V
Sbjct:  105 DFASRGIEIPEVR-LNLEKMMEQKHSAVKALTGGIAHLFKQNKVVHVNGFGKITGKNQVTATKADGSTQVIDTKNILVATGSEV--TPFPGITIDEDTIVSSTGALSLKKVPEKLVVIGAGVIGVELGSVWQRLGADV 239          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_MACFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Macaca fascicularis GN=DLD PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.468e-14
Identity = 49/138 (35.51%), Postives = 76/138 (55.07%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG----QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTV 403
            D  S G E+ E+   +  K++++K+  +  L G    L     V    G GKI G N+V  T++DG       K+ILIATGS     P PG    ++  ++S  ALSL+++P++ VV+G G I VE  S+W+ +G+ V
Sbjct:  105 DFASRGIEMSEVR-LNLDKMMEQKSTAVKALTGGIAHLFKQNKVIHVNGYGKITGKNQVTATKVDGGTQVVDTKNILIATGSEV--TPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADV 239          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_PONAB (Dihydrolipoyl dehydrogenase, mitochondrial OS=Pongo abelii GN=DLD PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.917e-14
Identity = 49/138 (35.51%), Postives = 75/138 (54.35%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG----QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTV 403
            D  S G E+ E+   +  K++++K+  +  L G    L     V    G GKI G N+V  T+ DG       K+ILIATGS     P PG    ++  ++S  ALSL+++P++ VV+G G I VE  S+W+ +G+ V
Sbjct:  105 DFASRGIEMSEVR-LNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEV--TPFPGIMIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADV 239          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_HUMAN (Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens GN=DLD PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.917e-14
Identity = 49/138 (35.51%), Postives = 75/138 (54.35%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG----QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTV 403
            D  S G E+ E+   +  K++++K+  +  L G    L     V    G GKI G N+V  T+ DG       K+ILIATGS     P PG    ++  ++S  ALSL+++P++ VV+G G I VE  S+W+ +G+ V
Sbjct:  105 DFASRGIEMSEVR-LNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEV--TPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADV 239          
The following BLAST results are available for this feature:
BLAST of EY659290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
DLDH_PIG1.734e-1535.51Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus ... [more]
STHA_CHRSD3.602e-1528.08Soluble pyridine nucleotide transhydrogenase OS=Ch... [more]
STHA_PSEU27.902e-1533.64Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
DLDH_CRIGR8.605e-1535.51Dihydrolipoyl dehydrogenase, mitochondrial OS=Cric... [more]
STHA_PSESM1.027e-1434.55Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
DLDH_RAT1.124e-1435.51Dihydrolipoyl dehydrogenase, mitochondrial OS=Ratt... [more]
DLDH_MOUSE1.124e-1434.78Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus ... [more]
DLDH_MACFA1.468e-1435.51Dihydrolipoyl dehydrogenase, mitochondrial OS=Maca... [more]
DLDH_PONAB1.917e-1435.51Dihydrolipoyl dehydrogenase, mitochondrial OS=Pong... [more]
DLDH_HUMAN1.917e-1435.51Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659290 ID=EY659290; Name=EY659290; organism=Citrus sinensis; type=EST; length=906bp
AGATGCAAGGAGTTATGGATGGGAGGTACATGAGATAAATGACTTCGACT
GGAAAAAACTTCTGCAAAAGAAGACAGATGAAATACTCAGACTAAATGGA
ATTTACAAGCGATTATTATCTAATGCTGGGGTAAAATTATATGAAGGGGA
GGGAAAGATAGTTGGTCCAAATGAAGTTGAGGTCACACAACTAGATGGCA
CTAAGTTAAGTTACTCAGCAAAGCACATATTGATCGCAACTGGAAGTAGG
GCTCAACGTGCTCCTATTCCTGGCCAGGAGCTGGCTATAACCTCTGACGA
GGCATTGAGCTTGGAAGAATTACCCAAGCGTGCTGTGGTGCTTGGTGGAG
GGTACATTGCTGTTGAGTTTGCTTCCATATGGCGAGGGATGGGTTCTACT
GTGGATCTATTATTTAGAAAGGAACTTCCATTAAGAGGGTTTGATGATGA
AATGCGGGCAGTAGTTGCCGAAATCTGGAAGGGAGGGGAATTAATTTGCA
CCCGAGGACTACCATAAAGGAGTTGATTAAGTCAGAGGAGAGTATAAAAG
TTATTACAGATCATGGTGAAGAGATTGTTGCAGATGTTGTACTCTTTGCC
ACTGGCAGGGCACCTAATACAAAAAGGTTGAATTTGAAAGCTGTTGTGGT
GGAAGTTGATCAAACAGGAGCTGTGGAGGTGGACGATAACTCACGCACCA
ACGTACCTAGTATATGGGCTGTGGGTGATGGAACTAATCGAATGAATCCT
ACCCCTGCGGCTTGATGGAGGGAACATGCTTTGCAAAAACTGTTTTTGGG
GGACACCCTGCAAACCAACTACGGGATGGACCCTGGGCTGGATTTGGCTA
CCTCCTTCTTTGGGAGGGGCCCCATGGAGGGACAGGCCTTAACCAGGAAA
TGGTGT
back to top