EY659290

Overview
NameEY659290
Unique NameEY659290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_MARAV (Soluble pyridine nucleotide transhydrogenase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=sthA PE=3 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 6.752e-13
Identity = 40/146 (27.40%), Postives = 63/146 (43.15%), Query Frame = 2
Query:   23 EVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            ++ E   F + ++LQ     I +   +  +  S   V L  G    V  + +E+      +  +  K  +IATGSR    P           SD  L+L   P+  ++ G G I  E+ASI+ G+G  VDL+      L   DDE+
Sbjct:   73 DIGEPRWFSFPRVLQNAQKVIGKQVKLRTQFYSRNRVDLINGRAAFVDKHRLEIRGNKSVETIHF-KQAIIATGSRPYLPPDVDFRHHRIYNSDSILNLSHTPRTLIIYGAGVIGSEYASIFAGLGVKVDLINPGSRLLSFLDDEI 217          

HSP 2 Score: 45.0542 bits (105), Expect = 6.752e-13
Identity = 24/86 (27.91%), Postives = 44/86 (51.16%), Query Frame = 1
Query:  472 NLEGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            +L   G+ +      + +   +  + +    G++I AD  L+  GR+ NT+ L L+ V +  +  G + VD++ RT V  I+A GD
Sbjct:  224 HLRNNGVLVRHNEQYESVKGDDHGVVLSLQSGKKIRADAFLWCNGRSGNTENLGLENVGLTPNSRGQLAVDEHYRTEVEHIYAAGD 309          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH1_BACST (Dihydrolipoyl dehydrogenase OS=Bacillus stearothermophilus GN=pdhD PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 51/157 (32.48%), Postives = 81/157 (51.59%), Query Frame = 2
Query:   47 DWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAE-IWKGGELICTRGL 511
            D+ K+ + K   + +L G  + LL    V++ +GE   V  N V V   D  + +Y+ K+ +IATGSR    P        + S  AL+L E+PK  VV+GGGYI +E  + +   G+ V +L      L GF+ +M A++ + + K G  + T  L
Sbjct:   84 DFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQ-TYTFKNAIIATGSRPIELPNFKFSNRILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNAL 239          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_MYCLE (Dihydrolipoyl dehydrogenase OS=Mycobacterium leprae GN=lpd PE=3 SV=1)

HSP 1 Score: 48.521 bits (114), Expect = 8.765e-13
Identity = 41/137 (29.93%), Postives = 69/137 (50.36%), Query Frame = 2
Query:   89 RLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDG---TKLSYSAKHILIATGSRAQRAPIPGQELA---ITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAEIWK 481
            R+ G++  +  N   +++ G G+    N + V   +G   T L  +  +++IATGS+ +   +PG  L+   IT +E +   ELP   V++G G I +EF  + +  G  VD+   + LP R   +E   V  EI K
Sbjct:   93 RVAGVHFLMKKNKITEIH-GYGRFTDANTLSVELSEGVPETPLKVTFNNVIIATGSKTRL--VPGTLLSTNVITYEEQILTRELPDSIVIVGAGAIGIEFGYVLKNYG--VDVTIVEFLP-RAMPNEDAEVSKEIEK 223          

HSP 2 Score: 46.2098 bits (108), Expect = 8.765e-13
Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 1
Query:  568 EEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGDGTNRM 744
            +E+ AD VL A G APN     L  V V +    AV++DD  +TNV  I+A+GD T ++
Sbjct:  259 QELKADKVLQAIGFAPNVDGYGLDKVGVALTADKAVDIDDYMQTNVSHIYAIGDVTGKL 317          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH3_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=acoL PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.139e-12
Identity = 37/145 (25.52%), Postives = 73/145 (50.34%), Query Frame = 2
Query:   47 DWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR---APIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAE 472
            DW K+  +K   + +L    + L+    +++ +G    +   ++ +   +G ++   A  +LIA+GS       AP  G E  + S +ALSL E+P   V++GGG I  E+A ++  +GS V ++   +  +   D+++  +  E
Sbjct:   77 DWSKMQSRKQQVVSQLVQGVQYLMKKNQIQVVKGTASFLSERKLLIEGENGKEIR-EADQVLIASGSEPIELPFAPFDG-EWILDSKDALSLSEIPSSLVIVGGGVIGCEYAGLFARLGSQVTIIETADRLIPAEDEDIARLFQE 219          

HSP 2 Score: 37.3502 bits (85), Expect = 1.139e-12
Identity = 28/97 (28.87%), Postives = 47/97 (48.45%), Query Frame = 1
Query:  475 LEGRGINLHPRTTIKELIKSEESIKVITDHGE-EIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGDGTNRMNPTPAA 762
            LE  G+ +H  + +  + ++ ++    +   E +  AD VL A GR P    L L+   V+    G + V+ + +TNVP I+A GD    +    AA
Sbjct:  221 LEEDGVEVHTSSRLGRVDQTAKTAIWKSGQREFKTKADYVLVAIGRKPRLDGLQLEQAGVDFSPKG-IPVNGHMQTNVPHIYACGDAIGGIQLAHAA 316          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_TRYCR (Dihydrolipoyl dehydrogenase OS=Trypanosoma cruzi GN=LPD PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.904e-12
Identity = 45/135 (33.33%), Postives = 68/135 (50.37%), Query Frame = 2
Query:   14 YGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQE-LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL 412
            YG    E    D  K+ Q+K   +  L G  + L     V  Y+GEG     + + V  LDG +  +  K  +IATGS     P +P  E + ++S  AL+L  +PK  VV+GGG I +E  S+W  +G+ V ++
Sbjct:   78 YGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMFETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAKVTVV 212          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH3_PSEPU (Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas putida GN=lpd3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 45/136 (33.09%), Postives = 73/136 (53.68%), Query Frame = 2
Query:   56 KLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG----QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDE 451
            +++++K + +  L    + L     V   +G G++ G  +V V   DG++ +  AK I+IATGS  +  P+PG     +  I S  ALSL ++PK  VV+G G I +E  S+WR +GS V ++   +    G D E
Sbjct:   83 QMMKQKDESVTGLTKGIEYLFRKNKVDWIKGWGRLDGVGKVVVKAEDGSETALQAKDIVIATGS--EPTPLPGVTIDNQRIIDSTGALSLPQVPKHLVVIGAGVIGLELGSVWRRLGSQVTVIEYLDRICPGTDTE 216          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_YEAST (Dihydrolipoyl dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=LPD1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.591e-11
Identity = 45/147 (30.61%), Postives = 74/147 (50.34%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHIL------IATGSRAQRAPIPG----QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL 412
            +A+  G +V+     +     + K D + +L G  + L     V  Y+G G      ++ VT +DG + +    HIL      +ATGS     P PG    +E  ++S  ALSL+E+PKR  ++GGG I +E  S++  +GS V ++
Sbjct:   89 EAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV--TPFPGIEIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVV 233          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_MYCTU (Dihydrolipoyl dehydrogenase OS=Mycobacterium tuberculosis GN=lpd PE=1 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 2.613e-11
Identity = 40/134 (29.85%), Postives = 65/134 (48.51%), Query Frame = 2
Query:   89 RLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELA---ITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAEIWK 481
            R+ G++  +  N   +++ G G     N + V   DG   S +  + +IATGS  +   +PG  L+   +T +E +   ELPK  ++ G G I +EF  + +  G  VD+   + LP R   +E   V  EI K
Sbjct:   93 RVAGVHFLMKKNKITEIH-GYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRL--VPGTSLSANVVTYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYG--VDVTIVEFLP-RALPNEDADVSKEIEK 220          

HSP 2 Score: 43.5134 bits (101), Expect = 2.613e-11
Identity = 28/84 (33.33%), Postives = 43/84 (51.19%), Query Frame = 1
Query:  487 GINLHPRTTIKELIKSEESIKV-ITDHG--EEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G+ +   T ++ +      + V +T  G  +E+ A+ VL A G APN +   L    V +    A+ VDD  RTNV  I+A+GD
Sbjct:  226 GVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGD 309          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_MYCBO (Dihydrolipoyl dehydrogenase OS=Mycobacterium bovis GN=lpd PE=3 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 2.613e-11
Identity = 40/134 (29.85%), Postives = 65/134 (48.51%), Query Frame = 2
Query:   89 RLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELA---ITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAEIWK 481
            R+ G++  +  N   +++ G G     N + V   DG   S +  + +IATGS  +   +PG  L+   +T +E +   ELPK  ++ G G I +EF  + +  G  VD+   + LP R   +E   V  EI K
Sbjct:   93 RVAGVHFLMKKNKITEIH-GYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRL--VPGTSLSANVVTYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYG--VDVTIVEFLP-RALPNEDADVSKEIEK 220          

HSP 2 Score: 43.5134 bits (101), Expect = 2.613e-11
Identity = 28/84 (33.33%), Postives = 43/84 (51.19%), Query Frame = 1
Query:  487 GINLHPRTTIKELIKSEESIKV-ITDHG--EEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G+ +   T ++ +      + V +T  G  +E+ A+ VL A G APN +   L    V +    A+ VDD  RTNV  I+A+GD
Sbjct:  226 GVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGD 309          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: CDR_PYRAB (Coenzyme A disulfide reductase OS=Pyrococcus abyssi GN=PYRAB14120 PE=3 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 2.616e-11
Identity = 35/110 (31.82%), Postives = 57/110 (51.82%), Query Frame = 2
Query:  176 VEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQEL--AITSD---EALSLEELPKR-----AVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL-RGFDDEMRAVVAE 472
            V V + DG K SY   +++ A G+  Q   I G +L    T+D   +A+++ E  ++      V++GGGYI +E A  +   G  V ++ R E  L R FD E+  ++ E
Sbjct:   94 VRVREKDGEK-SYEWDYLVFANGASPQVPAIEGVDLKGVFTADLPPDAVAIREYMEKNRVEDVVIVGGGYIGLEMAEAFVAQGKRVTMIVRGERILRRSFDKEVTDIIEE 202          

HSP 2 Score: 43.5134 bits (101), Expect = 2.616e-11
Identity = 25/80 (31.25%), Postives = 46/80 (57.50%), Query Frame = 1
Query:  490 INLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            +NL  +  +  +   +   KV+TD GE   AD+V+ ATG  PN +    + + V + +TGA+  ++  +T+V +++A GD
Sbjct:  208 VNLRLQEIVLRIEGKDRVEKVVTDAGE-YRADLVILATGIKPNIELA--RQLGVRIGETGAIWTNEKMQTSVENVYAAGD 284          
The following BLAST results are available for this feature:
BLAST of EY659290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
STHA_MARAV6.752e-1327.40Soluble pyridine nucleotide transhydrogenase OS=Ma... [more]
DLDH1_BACST8.054e-1332.48Dihydrolipoyl dehydrogenase OS=Bacillus stearother... [more]
DLDH_MYCLE8.765e-1329.93Dihydrolipoyl dehydrogenase OS=Mycobacterium lepra... [more]
DLDH3_BACSU1.139e-1225.52Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]
DLDH_TRYCR8.904e-1233.33Dihydrolipoyl dehydrogenase OS=Trypanosoma cruzi G... [more]
DLDH3_PSEPU1.984e-1133.09Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas putid... [more]
DLDH_YEAST2.591e-1130.61Dihydrolipoyl dehydrogenase, mitochondrial OS=Sacc... [more]
DLDH_MYCTU2.613e-1129.85Dihydrolipoyl dehydrogenase OS=Mycobacterium tuber... [more]
DLDH_MYCBO2.613e-1129.85Dihydrolipoyl dehydrogenase OS=Mycobacterium bovis... [more]
CDR_PYRAB2.616e-1131.82Coenzyme A disulfide reductase OS=Pyrococcus abyss... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659290 ID=EY659290; Name=EY659290; organism=Citrus sinensis; type=EST; length=906bp
AGATGCAAGGAGTTATGGATGGGAGGTACATGAGATAAATGACTTCGACT
GGAAAAAACTTCTGCAAAAGAAGACAGATGAAATACTCAGACTAAATGGA
ATTTACAAGCGATTATTATCTAATGCTGGGGTAAAATTATATGAAGGGGA
GGGAAAGATAGTTGGTCCAAATGAAGTTGAGGTCACACAACTAGATGGCA
CTAAGTTAAGTTACTCAGCAAAGCACATATTGATCGCAACTGGAAGTAGG
GCTCAACGTGCTCCTATTCCTGGCCAGGAGCTGGCTATAACCTCTGACGA
GGCATTGAGCTTGGAAGAATTACCCAAGCGTGCTGTGGTGCTTGGTGGAG
GGTACATTGCTGTTGAGTTTGCTTCCATATGGCGAGGGATGGGTTCTACT
GTGGATCTATTATTTAGAAAGGAACTTCCATTAAGAGGGTTTGATGATGA
AATGCGGGCAGTAGTTGCCGAAATCTGGAAGGGAGGGGAATTAATTTGCA
CCCGAGGACTACCATAAAGGAGTTGATTAAGTCAGAGGAGAGTATAAAAG
TTATTACAGATCATGGTGAAGAGATTGTTGCAGATGTTGTACTCTTTGCC
ACTGGCAGGGCACCTAATACAAAAAGGTTGAATTTGAAAGCTGTTGTGGT
GGAAGTTGATCAAACAGGAGCTGTGGAGGTGGACGATAACTCACGCACCA
ACGTACCTAGTATATGGGCTGTGGGTGATGGAACTAATCGAATGAATCCT
ACCCCTGCGGCTTGATGGAGGGAACATGCTTTGCAAAAACTGTTTTTGGG
GGACACCCTGCAAACCAACTACGGGATGGACCCTGGGCTGGATTTGGCTA
CCTCCTTCTTTGGGAGGGGCCCCATGGAGGGACAGGCCTTAACCAGGAAA
TGGTGT
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