EY659290

Overview
NameEY659290
Unique NameEY659290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_PSEFL (Dihydrolipoyl dehydrogenase OS=Pseudomonas fluorescens GN=lpd PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 4.246e-21
Identity = 43/138 (31.16%), Postives = 74/138 (53.62%), Query Frame = 2
Query:   47 DWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR-AQRAPIP-GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            D   ++ +K + +  L G    L    GV  +EG GK++   +VEVT LDG      A++++IA+GSR  +  P P   ++ + S  AL  + +PK+  V+G G I +E  S+W  +G+ V +L   +  L   D+++
Sbjct:   87 DVPAMVARKANIVKNLTGGIATLFKANGVTSFEGHGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLSDDIIVDSTGALEFQAVPKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQI 224          

HSP 2 Score: 49.2914 bits (116), Expect = 4.246e-21
Identity = 34/122 (27.87%), Postives = 56/122 (45.90%), Query Frame = 1
Query:  478 EGRGINLHPRTTIKELIKSEESIKVITDHGEEIVA-DVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGDGTNRMNPTPAA*WREHALQKLFLGDTLQTNYGMDPGL 840
            +G  I L  R T  E+ K + ++     +GE+    D ++ A GR P T  L      V +D+ G + VDD+ +T+VP ++A+GD          A      + +   G   Q NY + P +
Sbjct:  235 QGLNIRLGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSV 356          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_RALEH (Dihydrolipoyl dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=odhL PE=3 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 4.246e-21
Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 2
Query:   47 DWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDE--ALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL 412
            D  K+L++K D + ++    + L     V L +G GK VG +  E  Q+D      +AK ++IATGS+A+  P    +  + SD   AL    +PK+  V+G G I +E  S+WR +GS V +L
Sbjct:   89 DVAKMLKRKDDIVGKMTKGIEFLFRKNKVTLLKGYGKFVGKS-AEGFQVDVAGEVVTAKQVIIATGSKARHLPGIKVDNDLVSDNEGALKFPAVPKKLGVIGAGVIGLELGSVWRRLGSDVTVL 211          

HSP 2 Score: 57.7658 bits (138), Expect = 4.246e-21
Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 1
Query:  487 GINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G+N++  TT K  +  + + K      + +  D ++ + GR PNT  L L AV +  DQ G +EVDD+  T VP +WA+GD
Sbjct:  243 GVNVNEVTTGKNGVTVKYTDK--DGKAQTLEVDRLIVSVGRVPNTDNLGLDAVGLAADQRGFIEVDDHCATKVPGLWAIGD 321          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: TRXR2_BOVIN (Thioredoxin reductase 2, mitochondrial OS=Bos taurus GN=TXNRD2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 7.174e-21
Identity = 55/171 (32.16%), Postives = 83/171 (48.54%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQ-ELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAEIWKGGELICTRG 508
            DA  YGW V +     W  L     + +  LN  ++  L +  VK +  +   V  + V      G +   SA+HI+IATG R +    I G  E  ITSD+   L+E P + +V+G  Y+A+E A +  G+G    ++ R  +PLR FD +M ++V E   G      RG
Sbjct:   97 DAPHYGWGVAQA-PHSWATLADAVQNHVKSLNWGHRIQLQDRKVKYFNVKASFVDTHTVCGVSKGGEETLLSAEHIVIATGGRPRYPTHIEGALEYGITSDDLFWLKESPGKTLVVGASYVALECAGLLTGLGLDTTVMIR-SVPLRAFDQQMASLVTEHMAGHGTRILRG 265          

HSP 2 Score: 45.0542 bits (105), Expect = 7.174e-21
Identity = 27/74 (36.49%), Postives = 39/74 (52.70%), Query Frame = 1
Query:  544 IKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQ-TGAVEVDDNSRTNVPSIWAVGD---GTNRMNPT 753
            + + +D  +    D VL+A GR P T  LNL+   V  +  TG + VD    T+VP I+A+GD   G   + PT
Sbjct:  284 VDLTSDRKDAGTFDTVLWAIGRVPETASLNLEKAGVHTNPVTGKILVDAQETTSVPHIYAIGDVAEGRPELTPT 357          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH2_PSEAE (Dihydrolipoamide dehydrogenase OS=Pseudomonas aeruginosa GN=lpdG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 7.184e-21
Identity = 43/138 (31.16%), Postives = 74/138 (53.62%), Query Frame = 2
Query:   47 DWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR-AQRAPIP-GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            D   ++ +K + +  L G    L    GV  +EG GK++   +VEVT LDG      A++++IA+GSR  +  P P   ++ + S  AL  + +PK+  V+G G I +E  S+W  +G+ V +L   +  L   D+++
Sbjct:   87 DVPAMVARKANIVKNLTGGIATLFKANGVTSFEGHGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLTDDIIVDSTGALEFQAVPKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQI 224          

HSP 2 Score: 49.2914 bits (116), Expect = 7.184e-21
Identity = 34/122 (27.87%), Postives = 56/122 (45.90%), Query Frame = 1
Query:  478 EGRGINLHPRTTIKELIKSEESIKVITDHGEEIVA-DVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGDGTNRMNPTPAA*WREHALQKLFLGDTLQTNYGMDPGL 840
            +G  I L  R T  E+ K + ++     +GE+    D ++ A GR P T  L      V +D+ G + VDD+ +T+VP ++A+GD          A      + +   G   Q NY + P +
Sbjct:  235 QGLNIRLGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSV 356          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH1_PSEAE (Dihydrolipoyl dehydrogenase OS=Pseudomonas aeruginosa GN=lpdV PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.187e-21
Identity = 47/143 (32.87%), Postives = 74/143 (51.75%), Query Frame = 2
Query:   47 DWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPI-PGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAE 472
            D  + ++ K   + RL      LL   GV + +G  +I+    V V    G       +H+L+A GS++   PI P     I+S EAL+   LPKR VV+GGGYI +E  + +R +G  V ++  +   L G+D+E+   VA+
Sbjct:   84 DIARTVEWKDAIVDRLTSGVAALLKKHGVDVVQGWARILDGKSVAVELAGGGSQRIECEHLLLAAGSQSVELPILPLGGKVISSTEALAPGSLPKRLVVVGGGYIGLELGTAYRKLGVEVAVVEAQPRILPGYDEELTKPVAQ 226          

HSP 2 Score: 50.8322 bits (120), Expect = 7.187e-21
Identity = 28/68 (41.18%), Postives = 45/68 (66.18%), Query Frame = 1
Query:  532 SEESIKVITDHGEE--IVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            SE  ++V    GEE  I AD VL A GR P ++  NL+++ ++++   AV+VDD  RT++ ++WA+GD
Sbjct:  245 SENGVRVRDGAGEEREIAADQVLVAVGRKPRSEGWNLESLGLDMNGR-AVKVDDQCRTSMRNVWAIGD 311          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: MERA_THIFE (Mercuric reductase OS=Thiobacillus ferrooxidans GN=merA PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.212e-20
Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 1
Query:  487 GINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGDGTNR 741
            GI +   T   ++  ++    + T HGE + AD +L ATGRAPNT+RLNL+A  V ++  GA+ +D   RTN P+I+A GD T++
Sbjct:  310 GIEVLEHTQASQVAYADGEFVLATGHGE-LRADKLLVATGRAPNTRRLNLEAAGVAINAQGAIVIDQGMRTNSPNIYAAGDCTDQ 393          

HSP 2 Score: 51.9878 bits (123), Expect = 1.212e-20
Identity = 40/127 (31.50%), Postives = 59/127 (46.46%), Query Frame = 2
Query:   65 QKKTDEILRLNGIYKRLLS-NAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAI--TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR 436
            Q + DE+      Y+ +L  N  + +  GE +      V V   DG +        L+ATG+     PIPG +     TS E L  E +P+R  V+G   +A+E A  +  +GS V +L R  L LR
Sbjct:  169 QARVDELRHAK--YEGILDGNPAITVLRGEARFKDSRSVVVHLNDGGERVVMFDRCLVATGASPAVPPIPGLKDTPYWTSTEGLVSESIPERLAVIGSSVVALELAQAFARLGSHVTILARGTLFLR 293          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: TRXR1_MOUSE (Thioredoxin reductase 1, cytoplasmic OS=Mus musculus GN=Txnrd1 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20
Identity = 57/158 (36.08%), Postives = 85/158 (53.80%), Query Frame = 2
Query:    2 DARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAE 472
            D+R+YGW+V +    DW+K+ +     I  LN  Y+  L    V      G+ +GP+ +  T   G +  YSA+  LIATG R +   IPG +E  I+SD+  SL   P + +V+G  Y+A+E A    G+G  V ++ R  L LRGFD +M   + E
Sbjct:  196 DSRNYGWKVEDTVKHDWEKMTESVQSHIGSLNWGYRVALREKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL-LRGFDQDMANKIGE 352          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: GSHR_ECOLI (Glutathione reductase OS=Escherichia coli (strain K12) GN=gor PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20
Identity = 61/168 (36.31%), Postives = 89/168 (52.98%), Query Frame = 2
Query:   14 YGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAEIWKG-GELICTRGLP 514
            YG++   IN F+W+ L+  +T  I R++  Y+ +L    V + +G  + V    +EV   +G  ++  A HILIATG R     IPG E  I SD   +L  LP+R  V+G GYIAVE A +  G+G+   L  RK  PLR FD  +   + E+    G  + T  +P
Sbjct:   70 YGFDT-TINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV---NGETIT--ADHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIP 231          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_STAAW (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=pdhD PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.057e-20
Identity = 45/144 (31.25%), Postives = 76/144 (52.78%), Query Frame = 2
Query:   26 VHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            + E    +++K+ + K+  + +L G  + LL    V + +GE   V  N + V   + +  +Y+ K+ +IATGSR    P     +  I S  AL+L+E+P + VV+GGGYI  E  + +   GS V +L   +  L GF+ +M
Sbjct:   77 IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMD-EKSAQTYNFKNAIIATGSRPIEIPNFKFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQM 219          

HSP 2 Score: 55.0694 bits (131), Expect = 2.057e-20
Identity = 31/90 (34.44%), Postives = 51/90 (56.67%), Query Frame = 1
Query:  469 RNLEGRGINLHPRTTIKELIKSEESIKVITD-HGEE--IVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            + ++ +G+ +      K   +++  +KV  +  GEE  I AD VL   GR PNT  L L+ + V+    G +EVD  SRT++ +I+A+GD
Sbjct:  225 KGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGD 314          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_STAAU (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus GN=pdhD PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.057e-20
Identity = 45/144 (31.25%), Postives = 76/144 (52.78%), Query Frame = 2
Query:   26 VHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            + E    +++K+ + K+  + +L G  + LL    V + +GE   V  N + V   + +  +Y+ K+ +IATGSR    P     +  I S  AL+L+E+P + VV+GGGYI  E  + +   GS V +L   +  L GF+ +M
Sbjct:   77 IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMD-EKSAQTYNFKNAIIATGSRPIEIPNFKFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQM 219          

HSP 2 Score: 55.0694 bits (131), Expect = 2.057e-20
Identity = 31/90 (34.44%), Postives = 51/90 (56.67%), Query Frame = 1
Query:  469 RNLEGRGINLHPRTTIKELIKSEESIKVITD-HGEE--IVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            + ++ +G+ +      K   +++  +KV  +  GEE  I AD VL   GR PNT  L L+ + V+    G +EVD  SRT++ +I+A+GD
Sbjct:  225 KGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGD 314          
The following BLAST results are available for this feature:
BLAST of EY659290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
DLDH_PSEFL4.246e-2131.16Dihydrolipoyl dehydrogenase OS=Pseudomonas fluores... [more]
DLDH_RALEH4.246e-2134.68Dihydrolipoyl dehydrogenase OS=Ralstonia eutropha ... [more]
TRXR2_BOVIN7.174e-2132.16Thioredoxin reductase 2, mitochondrial OS=Bos taur... [more]
DLDH2_PSEAE7.184e-2131.16Dihydrolipoamide dehydrogenase OS=Pseudomonas aeru... [more]
DLDH1_PSEAE7.187e-2132.87Dihydrolipoyl dehydrogenase OS=Pseudomonas aerugin... [more]
MERA_THIFE1.212e-2042.35Mercuric reductase OS=Thiobacillus ferrooxidans GN... [more]
TRXR1_MOUSE1.790e-2036.08Thioredoxin reductase 1, cytoplasmic OS=Mus muscul... [more]
GSHR_ECOLI1.790e-2036.31Glutathione reductase OS=Escherichia coli (strain ... [more]
DLDH_STAAW2.057e-2031.25Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAU2.057e-2031.25Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659290 ID=EY659290; Name=EY659290; organism=Citrus sinensis; type=EST; length=906bp
AGATGCAAGGAGTTATGGATGGGAGGTACATGAGATAAATGACTTCGACT
GGAAAAAACTTCTGCAAAAGAAGACAGATGAAATACTCAGACTAAATGGA
ATTTACAAGCGATTATTATCTAATGCTGGGGTAAAATTATATGAAGGGGA
GGGAAAGATAGTTGGTCCAAATGAAGTTGAGGTCACACAACTAGATGGCA
CTAAGTTAAGTTACTCAGCAAAGCACATATTGATCGCAACTGGAAGTAGG
GCTCAACGTGCTCCTATTCCTGGCCAGGAGCTGGCTATAACCTCTGACGA
GGCATTGAGCTTGGAAGAATTACCCAAGCGTGCTGTGGTGCTTGGTGGAG
GGTACATTGCTGTTGAGTTTGCTTCCATATGGCGAGGGATGGGTTCTACT
GTGGATCTATTATTTAGAAAGGAACTTCCATTAAGAGGGTTTGATGATGA
AATGCGGGCAGTAGTTGCCGAAATCTGGAAGGGAGGGGAATTAATTTGCA
CCCGAGGACTACCATAAAGGAGTTGATTAAGTCAGAGGAGAGTATAAAAG
TTATTACAGATCATGGTGAAGAGATTGTTGCAGATGTTGTACTCTTTGCC
ACTGGCAGGGCACCTAATACAAAAAGGTTGAATTTGAAAGCTGTTGTGGT
GGAAGTTGATCAAACAGGAGCTGTGGAGGTGGACGATAACTCACGCACCA
ACGTACCTAGTATATGGGCTGTGGGTGATGGAACTAATCGAATGAATCCT
ACCCCTGCGGCTTGATGGAGGGAACATGCTTTGCAAAAACTGTTTTTGGG
GGACACCCTGCAAACCAACTACGGGATGGACCCTGGGCTGGATTTGGCTA
CCTCCTTCTTTGGGAGGGGCCCCATGGAGGGACAGGCCTTAACCAGGAAA
TGGTGT
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