EY659263

Overview
NameEY659263
Unique NameEY659263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: FIXA_SALDC (Protein fixA OS=Salmonella dublin (strain CT_02021853) GN=fixA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11
Identity = 53/192 (27.60%), Postives = 94/192 (48.96%), Query Frame = 1
Query:  145 ALEEALRIKESGLASEVVAVSMGPAQCVDTL--RTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 708
            A+E A ++K+    ++VVA+S+G     +    +  L+ G D  + V  +   Q  P   A  L +  +     L+I G  + D    Q G +V   L+ P     SK++   +  L  VERE++  +ETL + LPAVI     +N P+  ++  I+ A  KP++ ++P ++ ++  S     QV  P +R+
Sbjct:   41 AIEAACQLKQQLGDAQVVAMSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQHTATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDSTLT-VERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVSAYSTQQVAAPKQRE 231          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: FIXA_ECOL5 (Protein fixA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fixA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11
Identity = 49/192 (25.52%), Postives = 93/192 (48.44%), Query Frame = 1
Query:  145 ALEEALRIKESGLASEVVAVSMGPAQCVDTL--RTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 708
            A+E A ++K+  + ++V A+S+G     +    +  L+ G D  + V  +   Q  P   A +L +  +     LI+ G  + D    Q G +V  +L+ P     SK++      L  VERE++   ETL + LPAV+     +N P+  ++  I+ A  KP++ ++  ++  + ++     QV  P +R+
Sbjct:   41 AIEAACQLKQQAVEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASVLAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLT-VERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: FIXA_ECO81 (Protein fixA OS=Escherichia coli O81 (strain ED1a) GN=fixA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11
Identity = 49/192 (25.52%), Postives = 93/192 (48.44%), Query Frame = 1
Query:  145 ALEEALRIKESGLASEVVAVSMGPAQCVDTL--RTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 708
            A+E A ++K+  + ++V A+S+G     +    +  L+ G D  + V  +   Q  P   A +L +  +     LI+ G  + D    Q G +V  +L+ P     SK++      L  VERE++   ETL + LPAV+     +N P+  ++  I+ A  KP++ ++  ++  + ++     QV  P +R+
Sbjct:   41 AIEAACQLKQQAVEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASVLAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLT-VERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231          
The following BLAST results are available for this feature:
BLAST of EY659263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
FIXA_SALDC7.457e-1127.60Protein fixA OS=Salmonella dublin (strain CT_02021... [more]
FIXA_ECOL57.457e-1125.52Protein fixA OS=Escherichia coli O6:K15:H31 (strai... [more]
FIXA_ECO817.457e-1125.52Protein fixA OS=Escherichia coli O81 (strain ED1a)... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659263 ID=EY659263; Name=EY659263; organism=Citrus sinensis; type=EST; length=899bp
TCGGCAACAACGGCAGCCGAAATGATAGAAATGGTGGCAATAAAGCGAGT
CGTTGACTACGCCGTCAAGATCAGGGTGAAATCCGACAGGACAGGAGTGG
AGACAAACAACGTTAAGATGTCGATGAACCCCTTTTGCGAGATAGCGCTG
GAGGAGGCTCTGAGGATCAAGGAATCTGGATTGGCTTCCGAGGTTGTCGC
CGTCAGCATGGGCCCCGCCCAGTGCGTTGATACTCTACGGACGGGTTTAG
CTATGGGTGCTGATAGAGGAGTCCACGTGGAGGCTGCCGGTCAGCTGTAT
CCTTTGACTGTTGCCAAGATTTTGAAGAGCCTTGTTGAGGTTGAGAAGCC
TGGCTTGATTATTCTGGGAAAGCAGGCAATTGATGATGACTGCAATCAAA
CAGGGCAAATGGTTGCAGGGCTACTCAGCTGGCCGCAGGGAACCTTTGCT
TCTAAGGTTGTGCTGGATAAGGAAAAACAATTAGCAATGGTGGAGAGAGA
AGTAGATGGTGGTCTTGAGACTTTAGAATTGGATTTACCAGCTGTAATCA
CCACTGATTTGAGACTCAACCAACCGAGGTACGCGACACTCCCCAACATA
ATGAACGCAAAATCGAAACCAATAAAGAAATATACTCCCCAGGAGCTAAA
CGTGGATGTCAAATCTGATTTGGAGGTGATTCAAGTAACAGAACCTCCCA
AGAGAAAGCTGGGGTTATATTATCTTCTGGTGAAGAGCTCATTNGACAGC
TAAAAATGAAGCCCGCGTCATTTAAACTTTCTTTGTAACTGTTATTCCCA
TCGAAATACTAGAACAAAAATTAAGAACTTCAGGCGTCAAATAAATAGCC
TTAGTTCAAATAGAGTATGGCCTCAAAATGCAGATTGGCCTGCCATGCT
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