EY659260

Overview
NameEY659260
Unique NameEY659260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659260 vs. ExPASy Swiss-Prot
Match: CWC15_CAEEL (Protein CWC15 homolog OS=Caenorhabditis elegans GN=T10C6.5 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 2 
Query:  581 LLVGNPLLNNPTS--------FNVKRRWDDDVVFKNQARG--ETKTXKRFINDTIXNDFHRIFLQKYMK 757
            +L GNPLLN+  +        F VKRRWDDDVVFKN A+G  E K    FIND I ++FH+ F+ KY+K
Sbjct:  162 ILAGNPLLNDTPAGSSTSGGDFTVKRRWDDDVVFKNCAKGVEERKKEVTFINDAIRSEFHKKFMDKYIK 230
The following BLAST results are available for this feature:
BLAST of EY659260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CWC15_CAEEL5.616e-1152.17Protein CWC15 homolog OS=Caenorhabditis elegans GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659260 ID=EY659260; Name=EY659260; organism=Citrus sinensis; type=EST; length=889bp
CTCGAACCTCGATCGAACAAAGAATGGATCGGTCAAAATAAGGTAATCTA
GAGATTGTAATTGGAACGACATGACGACGGCAGCTCGACCCACATGGGCT
CCCGCAAAAGGTGGTAATGAGCAAGGCGGTACTCGAATTTTCGGGCCGTC
GCAGAAGTACTCATCGAGGGACCTTGCAGCTCATACAAATTTGAAGCCTA
TAAAAGAAGGACAAGATACCAAAGATGAATTACAGAAAAGGAACCTCCGG
CATGAGCTAGAAGAGCGTGAACGGAGACATTTCTCATCTAAGGATAAGTC
CTACAATGATGACAGAGATCGTCGGAAGAGTAGCCATCTTTTGTTGGAAG
GGACAAAGAGGGATATTGAGGACCGTGCTGCTCCACGTAGCATAGATGCT
GATGATTCTGATGTCGAAGTCAAAAGTGATGATGAGAGTGATGATGATGA
CGACGATGATGAGGATGACACTGAAGCACTTTTGGCTGAGCTTGAACTAA
TAAAGAAGGAAAGAGCGGAGGAGAAGCTCCGGAAGGAAAAAGAACAGTGG
GAAGAAGAGGCTAAAGCCAAGGAATCAGAGCTTCTTGTAGGAAATCCATT
GCTGAATAATCCAACATCCTTTAATGTGAAAAGAAGGTGGGATGACGATG
TGGTTTTCAAGAACCAAGCCCGTGGTGAAACCAAGACTNCCAAGCGCTTC
ATCAATGACACTATCANGAATGACTTCCACAGGATATTCTTACAGAAATA
CATGAAGTAGCTTCGCTAAAGTAATTCTGAGGTGAAGGCCAAGTTTTACT
GCTTCAAATCAAGAAAAGACTTGGNTTAAATNCTNNGTTGNATATCATTG
ACTCTGGGTTTGAAATTGAGGCTACCATGTATAAGAGCA
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