EY659258

Overview
NameEY659258
Unique NameEY659258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig185 contig Csv1_Contig185:486..1334. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659258 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.188e-23
Identity = 54/151 (35.76%), Postives = 81/151 (53.64%), Query Frame = 1
Query:   16 LWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIP--TGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC 459
            LWFDP+  +H+YS+LW   QI+FY+D  PIR FK +  +G  FP  +PM +Y ++W+  DWAT GG  + ++  AP++  +  F + GC        +  CD         P    +  +Q  K+   R K+  Y+YC D+ RY   P EC
Sbjct:  139 LWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCE---ASVNAKFCDTQGKRWWDQPEFRDLDAAQWQKLAWVRNKYTIYNYCTDRKRYSQVPPEC 286          
BLAST of EY659258 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.648e-23
Identity = 55/152 (36.18%), Postives = 82/152 (53.95%), Query Frame = 1
Query:   16 LWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESS---KVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC 459
            LWFDPS  +H YS+LW   QI+F++D IPIR FK    +G  FP  +PM LY+++W+  DWAT GG  + N+  AP++  +  F + GC         +K   T+       +    +   Q  +++  R K   Y+YC D+ R+ V P EC
Sbjct:  142 LWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQ----ASVEAKYCATQGRMWWDQNEFRDLDAEQYRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 289          
BLAST of EY659258 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23
Identity = 59/160 (36.88%), Postives = 85/160 (53.12%), Query Frame = 1
Query:   13 NLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSP---SQRI------KMENFRRKHMTYSYCYDQIRYKVP-PFEC 459
            +LWFDP+ DFH YS+LW    I+F +D IP+REFK    MG  +P  +PM LY+++W+   WAT GG  + ++  AP+   + +F    C             ++   + S P G SP   SQR+      KM   +RK+M Y+YC D  R+    P EC
Sbjct:  137 HLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADAC-------------VSSGGRSSCPAG-SPRWFSQRLDLTAEDKMRVVQRKYMIYNYCTDTKRFPQGFPKEC 282          
BLAST of EY659258 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23
Identity = 57/151 (37.75%), Postives = 86/151 (56.95%), Query Frame = 1
Query:   13 NLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRY-KVPPFEC 459
            +LWFDP+ DFH Y I+W   ++IF IDGIPIREFK + ++G  FP  +PM LYA++W+   WAT GG  + ++  AP+   + ++ +  C +       S C    SS  +         R+K    +RK+M Y+YC D+ R+ +  P EC
Sbjct:  137 HLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVW---SNGKSSCS-ANSSWFTQVLDFKGKNRVKWA--QRKYMVYNYCTDKKRFPQGAPPEC 281          
BLAST of EY659258 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   16 LWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSF---DPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC 459
            LWFDP+  +H YS+LW   QI+ ++D +PIR FK +  +G  FP  +PM +Y+++WD  DWAT GG  + ++  AP+   ++ F + GC       ++  ++K       K          +R++    R+K+  Y+YC D+ RY   P EC
Sbjct:  140 LWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRW--VRQKYTIYNYCTDRKRYPTLPPEC 289          
BLAST of EY659258 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23
Identity = 55/152 (36.18%), Postives = 84/152 (55.26%), Query Frame = 1
Query:   16 LWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPT---GVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC 459
            LWFDP+  +H+YS+LW   QI+F +D IPIR FK    +G  FP  +PM +Y ++W+  DWAT GG  + ++  AP+V E+  F + GC        +S+   T+  +    T    +   Q  +++  R+K   Y+YC D+ RY   P EC
Sbjct:  140 LWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCE----ASVNSRFCATQGKRWWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQLPPEC 287          
BLAST of EY659258 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.006e-22
Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 1
Query:   13 NLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAK-PMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYK--VPPFEC 459
            +LWFDP+ +FH Y I W   +IIF +DGIPIREF    S G  FP K PM LYA++W+   WAT GG  + ++  AP+   + ++ + GC +      + K  +  ++       +  + + +M+  + K+M Y+YC D+ R+   VPP EC
Sbjct:  132 HLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGCVW-----VNGK-SVCPANSQWFTQKLDSNGQTRMKGVQSKYMVYNYCSDKKRFPRGVPP-EC 276          
BLAST of EY659258 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22
Identity = 53/152 (34.87%), Postives = 84/152 (55.26%), Query Frame = 1
Query:   16 LWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIP--TGVSPSQRIKMENFRRKHMTYSYCYDQIRY-KVPPFEC 459
            LWFDP+ ++H+YSILW   QI+F++D +PIR FK +  +G  FP  +PM +Y ++W+  DWAT GG  + ++  AP++  +  F + GC        +  CD         P    +  +Q  ++   R+K+  Y+YC D  RY  + P EC
Sbjct:  141 LWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCE---ASVNAKFCDTQGKRWWDQPEFRDLDAAQWRRLRWVRQKYTIYNYCTDTKRYPHISPPEC 289          
BLAST of EY659258 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.716e-22
Identity = 53/151 (35.10%), Postives = 86/151 (56.95%), Query Frame = 1
Query:   13 NLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAK-PMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRY-KVPPFEC 459
            +LWFDP+ +FH Y I W   +IIF +DGIPIREFK   ++G  FP + PM LYA++W+   WAT GG  + ++  AP+   + ++ + GC +       S C    ++       +  + + +M+  + K+M Y+YC D+ R+ +  P EC
Sbjct:  137 HLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGCVW---ANGKSSC---SANSPWFTQKLDSNGQTRMKGVQSKYMIYNYCTDKRRFPRGVPAEC 281          
BLAST of EY659258 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.517e-22
Identity = 51/152 (33.55%), Postives = 82/152 (53.95%), Query Frame = 1
Query:   16 LWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSK---VSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC 459
            LWFDP+ D+H YS+LW    I F++D  PIR FK +  +G  +P  +PM LY+++W+  DWAT GG+ + ++  AP+V  +  F + GC         +K   T+ ++         +  +Q  ++   R++H  Y+YC D  RY     EC
Sbjct:  140 LWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCE----ASAEAKFCATQGARWWDQPEFQDLDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAPEC 287          
The following BLAST results are available for this feature:
BLAST of EY659258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTHA_PHAAN1.188e-2335.76Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_BRAOB2.648e-2336.18Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH25_ARATH4.516e-2336.88Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH4.516e-2337.75Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_TOBAC7.703e-2333.55Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN7.703e-2336.18Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH1.006e-2236.18Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN1.314e-2234.87Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH1.716e-2235.10Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT8.517e-2233.55Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659258 ID=EY659258; Name=EY659258; organism=Citrus sinensis; type=EST; length=848bp
AGAAGAGAGAACAATCTCTGGTTTGATCCTTCTGATGATTTCCATCAGTA
CAGTATTCTCTGGACTGATTCCCAGATCATATTTTATATAGACGGTATTC
CAATTAGGGAGTTTAAGAGAACTGCATCTATGGGAGGAGATTTTCCTGCT
AAGCCGATGTCTTTGTACGCCACAATCTGGGATGGCTCTGATTGGGCTAC
AAATGGTGGCAAATACCGAGTGAACTACAAATATGCTCCCTATGTGACTG
AATTCTCTGACTTCGTACTCCACGGATGTTCATTTGATCCTATTGAGCAA
ACTTCTTCCAAGTGTGACATAACCGAAAGTTCCAAAGTATCAATCCCTAC
TGGCGTCTCCCCATCACAGAGAATTAAAATGGAAAACTTTAGGAGGAAGC
ATATGACCTATTCCTACTGCTATGACCAAATTCGATACAAAGTTCCTCCA
TTTGAGTGTGTGATCAACCCCCTTGAGGCGGAGCGCCTTAAAGTACACGA
TCCAGTTACATTCGGGGGAGGGCGGCGCCATCACGGGAAACGACACCACC
GAAGCCGATCAAGCGGAACCAAGGCCAATGACGTTTGATGATGACTATTA
TGCTACATGCANGAGCACTAATTGGTCATCTCTCCTCTTCTATATCCTTT
GAGTTTGATTTACGGAAGTGGGGTTCTGCNTATTTTGTGTATAGAGACAG
ACCAGGAGATATCAGATAGCACAGATTTTATTGAGGGTGGTANGAATGGT
TATTGGAATGGNTTGTGGNGGTNATGNATGNNGAATAGTTCATTGCCTAT
NCATTTTATCATTGTGATGATGCTGNCTTTTGGCCTTAAAAANNANNN
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