EY659256

Overview
NameEY659256
Unique NameEY659256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.815e-24
Identity = 60/113 (53.10%), Postives = 73/113 (64.60%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWS----IEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMHARGW SIYC+P RPA  GSAPINLSDRLNQ  R     W   S+  +LS    +W+     +++   +       + +T+IPLL YC LP  C
Sbjct:  756 EIGWIYGSVTEDILTGFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLR-----WALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLLAYCMLPAFC 863          

HSP 2 Score: 97.8265 bits (242), Expect = 9.372e-20
Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 1
Query:   34 GFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G++DE SLL+SQ  LEKRFGQS VF+A+T ME GG+P +    TLLKEAIHVISCGYE KT+WG E+
Sbjct:  691 GYEDEMSLLVSQKRLEKRFGQSPVFIAATFMEQGGLPSTTNPLTLLKEAIHVISCGYEAKTDWGKEI 757          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.272e-24
Identity = 59/114 (51.75%), Postives = 73/114 (64.04%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWS-----IEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGS+TEDILTGFKMH RGWRSIYCMP RPA  GSAPINLSDRL+Q  R     W   SV   LS    +W+      +++   +       +  T++PL+ YCTLP +C
Sbjct:  672 EIGWIYGSITEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLR-----WALGSVEIFLSRHCPLWYGCSGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAIC 780          

HSP 2 Score: 94.7449 bits (234), Expect = 7.934e-19
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 1
Query:   46 EKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            ++S+L+SQ S EK FG S VF+ STLMENGGVP S    TL+KEAIHVISCGYE+KTEWG E+
Sbjct:  611 DRSMLISQTSFEKTFGLSTVFIESTLMENGGVPDSVNPSTLIKEAIHVISCGYEEKTEWGKEI 673          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.825e-23
Identity = 59/113 (52.21%), Postives = 71/113 (62.83%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWS----IEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMHARGW SIYC P RPA  GSAPINLSDRLNQ  R     W   S+  +LS    +W+     + +   +       + +T+IPL+ YC LP  C
Sbjct:  769 EIGWIYGSVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLR-----WALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPITSIPLIAYCILPAFC 876          

HSP 2 Score: 107.457 bits (267), Expect = 1.183e-22
Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 1
Query:   34 GFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G+DDE+S+LMSQ S+EKRFGQS VF+A+T ME GG+P +    TLLKEAIHVISCGYEDKTEWG E+
Sbjct:  704 GYDDERSILMSQRSVEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKEAIHVISCGYEDKTEWGKEI 770          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.113e-23
Identity = 59/113 (52.21%), Postives = 72/113 (63.72%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWSIEIS*EVCLC*HHYHSL----TAIPLLMYCTLPTVC 828
            +IGWIYGS+TEDILTGFKMH  GWRSIYC+PKRPA  GSAP+NLSDRL+Q  R     W   SV    S    +W+      +      + +S+    T+IPLL YCTLP +C
Sbjct:  781 EIGWIYGSITEDILTGFKMHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLR-----WALGSVEIFFSKHCPLWYGYGGGLKFLERFSYINSIVYPWTSIPLLAYCTLPAIC 888          

HSP 2 Score: 94.3597 bits (233), Expect = 1.036e-18
Identity = 43/67 (64.18%), Postives = 57/67 (85.07%), Query Frame = 1
Query:   34 GFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G + +K+ +++Q  LEK+FGQS+VFVASTL+ENGG  +SA+  +LLKEAIHVISCGYEDKT+WG E+
Sbjct:  716 GAETDKAGIVNQQKLEKKFGQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEI 782          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.113e-23
Identity = 61/118 (51.69%), Postives = 71/118 (60.17%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLS-----------GMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMH RGWRSIYCMP RPA  GSAPINLSDRL+Q  R     W   SV   LS           G + W   +S    +     +  T++PL+ YC LP +C
Sbjct:  677 EIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLR-----WALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTI----VYPFTSLPLIAYCCLPAIC 785          

HSP 2 Score: 100.908 bits (250), Expect = 1.107e-20
Identity = 46/63 (73.02%), Postives = 55/63 (87.30%), Query Frame = 1
Query:   46 EKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            E+S+L+SQMS EK FG S+VF+ STLMENGGVP+SA   TL+KEAIHVISCGYE+KTEWG E+
Sbjct:  616 ERSMLISQMSFEKSFGLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEI 678          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 3.113e-23
Identity = 61/118 (51.69%), Postives = 71/118 (60.17%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLS-----------GMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMH RGWRSIYCMP RPA  GSAPINLSDRL+Q  R     W   SV   LS           G + W   +S    +     +  T++PL+ YC LP +C
Sbjct:  677 EIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLR-----WALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTI----VYPFTSLPLIAYCCLPAIC 785          

HSP 2 Score: 100.908 bits (250), Expect = 1.107e-20
Identity = 46/63 (73.02%), Postives = 55/63 (87.30%), Query Frame = 1
Query:   46 EKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            E+S+L+SQMS EK FG S+VF+ STLMENGGVP+SA   TL+KEAIHVISCGYE+KTEWG E+
Sbjct:  616 ERSMLISQMSFEKSFGLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEI 678          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.065e-23
Identity = 61/114 (53.51%), Postives = 71/114 (62.28%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWSIEIS*EVCLC*HHY-----HSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMH  GWRSIYC+PK PA  GSAP+NLSDRL+Q  R     W   SV    S    +W+      + CL    Y     +  T+IPLL YCTLP +C
Sbjct:  782 EIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLR-----WALGSVEIFFSNHCPLWYGYGGGLK-CLERFSYINSIVYPFTSIPLLAYCTLPAIC 889          

HSP 2 Score: 96.2857 bits (238), Expect = 2.727e-19
Identity = 44/67 (65.67%), Postives = 58/67 (86.57%), Query Frame = 1
Query:   34 GFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G ++EK+ +++Q  LEK+FGQS+VFVASTL+ENGG  +SA+  +LLKEAIHVISCGYEDKT+WG E+
Sbjct:  717 GAENEKAGIVNQQKLEKKFGQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEI 783          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.934e-23
Identity = 59/113 (52.21%), Postives = 73/113 (64.60%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWSIEIS*EVCLC*HHYHSL----TAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMH  GWRS+YCMPKR A  GSAPINLSDRL+Q  R     W   SV   LS    +W+      +      + +S+    T++PLL+YC+LP +C
Sbjct:  777 EIGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLR-----WALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLLVYCSLPAIC 884          

HSP 2 Score: 80.4925 bits (197), Expect = 1.548e-14
Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 1
Query:   64 SQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            +Q+ LEK+FGQS V VASTL+ NGGVP +    +LL+E+I VISCGYE+KTEWG E+
Sbjct:  722 AQLKLEKKFGQSPVLVASTLLLNGGVPSNVNPASLLRESIQVISCGYEEKTEWGKEI 778          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.057e-23
Identity = 59/113 (52.21%), Postives = 73/113 (64.60%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWSIEIS*EVCLC*HHYHSL----TAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMH  GWRS+YCMPKR A  GSAPINLSDRL+Q  R     W   SV   LS    +W+      +      + +S+    T++PL++YC+LP VC
Sbjct:  773 EIGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLR-----WALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLIVYCSLPAVC 880          

HSP 2 Score: 87.0409 bits (214), Expect = 1.654e-16
Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 1
Query:   46 EKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            EK    +Q+ LEK+FGQS VFVAS +++NGGVP++A+   LL+EAI VISCGYEDKTEWG E+
Sbjct:  712 EKRSEATQLKLEKKFGQSPVFVASAVLQNGGVPRNASPACLLREAIQVISCGYEDKTEWGKEI 774          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.183e-22
Identity = 60/114 (52.63%), Postives = 71/114 (62.28%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWSIEIS*EVCLC*HHY-----HSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMH  GWRSIYC+PKR A  GSAP+NLSDRL+Q  R     W   S+    S    +W+      + CL    Y     +  T+IPLL YCTLP +C
Sbjct:  781 EIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLR-----WALGSIEIFFSNHCPLWYGYGGGLK-CLERFSYINSIVYPWTSIPLLAYCTLPAIC 888          

HSP 2 Score: 96.2857 bits (238), Expect = 2.727e-19
Identity = 44/67 (65.67%), Postives = 58/67 (86.57%), Query Frame = 1
Query:   34 GFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G ++EK+ +++Q  LEK+FGQS+VFVASTL+ENGG  +SA+  +LLKEAIHVISCGYEDKT+WG E+
Sbjct:  716 GAENEKAGIVNQQKLEKKFGQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEI 782          
The following BLAST results are available for this feature:
BLAST of EY659256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
CESAA_ARATH2.815e-2453.10Probable cellulose synthase A catalytic subunit 10... [more]
CESA8_ARATH6.272e-2451.75Cellulose synthase A catalytic subunit 8 [UDP-form... [more]
CESA1_ARATH1.825e-2352.21Cellulose synthase A catalytic subunit 1 [UDP-form... [more]
CESA6_ORYSJ3.113e-2352.21Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA4_ORYSJ3.113e-2351.69Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI3.113e-2351.69Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA3_ORYSJ4.065e-2353.51Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA9_ARATH6.934e-2352.21Probable cellulose synthase A catalytic subunit 9 ... [more]
CESA2_ARATH9.057e-2352.21Cellulose synthase A catalytic subunit 2 [UDP-form... [more]
CESA5_ORYSJ1.183e-2252.63Probable cellulose synthase A catalytic subunit 5 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659256 ID=EY659256; Name=EY659256; organism=Citrus sinensis; type=EST; length=939bp
CCACGCGTCCGCATATTTGCCTACGCAGGTGCTGGATTTGATGATGAAAA
GTCACTACTTATGTCACAAATGAGCCTGGAGAAGCGATTTGGTCAATCAG
CTGTTTTTGTTGCTTCTACACTTATGGAGAATGGTGGTGTTCCACAGTCT
GCAACACATGAAACTCTTCTTAAGGAGGCCATTCATGTTATCAGTTGTGG
TTACGAGGATAAAACAGAATGGGGATCTGAGGTATGTTGTCTGATTTAAC
AGACACTGATGTATTTCCAAGTTTCTGTCTATATAAAGTGACTGTGTGAA
TCTAAGCAACTGAAATGACTCATTGTTCATCGAACCATTTCTACTATGCT
ACTGAATGACCCCTTGCGATGTTATTATAATTCCAGTTCATCTGTAAATA
ATATGGCACACCCACCAACACACATTTCTTATTGAAGAAATAACTTGCAT
TCTCTTTGTTATCATTTCAGTTTCTCTTGCAAACACCGATTTTTGTCTCT
TGCTCTGCAGATAGGATGGATTTATGGTTCTGTTACGGAAGATATTCTTA
CAGGATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTACTGCATGCCT
AAGCGCCCAGCCCTTTAAGGGTCTGCTCCTATTAATCTTTCAGATCGTCT
AAACCAGTGCTNNCGTGGGCTCTAGGNTCTGTGGAAATTCTTTTCAGTCG
GCACTGTCCTATCTGGTATGGTATGGTGGTCGATTGAAATTTCTTGAGAA
GTTTGCCTATGTTGACACCACTATCATTCTCTCACTGCAATTCCTCTTCT
CATGTATTGCACGCTGCCAACTGTCTGTCTATTAACGAACAGTTCATTAT
GCTCAAGTATTTNATCATTACCATTACTCACTTTTTACCTTTTTATTTTT
CAGGTTGTGAAAATGACTCCTACCCTAAATTCTTTTGTT
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