EY659256

Overview
NameEY659256
Unique NameEY659256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.183e-22
Identity = 60/114 (52.63%), Postives = 71/114 (62.28%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWSIEIS*EVCLC*HHY-----HSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMH  GWRSIYC+PKR A  GSAP+NLSDRL+Q  R     W   S+    S    +W+      + CL    Y     +  T+IPLL YCTLP +C
Sbjct:  781 EIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLR-----WALGSIEIFFSNHCPLWYGYGGGLK-CLERFSYINSIVYPWTSIPLLAYCTLPAIC 888          

HSP 2 Score: 96.2857 bits (238), Expect = 2.727e-19
Identity = 44/67 (65.67%), Postives = 58/67 (86.57%), Query Frame = 1
Query:   34 GFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G ++EK+ +++Q  LEK+FGQS+VFVASTL+ENGG  +SA+  +LLKEAIHVISCGYEDKT+WG E+
Sbjct:  716 GAENEKAGIVNQQKLEKKFGQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEI 782          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.545e-22
Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWW----SIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMH+ GWRS+YC PK PA  GSAPINLSDRL+Q  R     W   SV   LS    +W+     ++    +       +  T+IPLL+YC+LP +C
Sbjct:  759 EIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLR-----WALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSIPLLVYCSLPAIC 866          

HSP 2 Score: 84.7297 bits (208), Expect = 8.210e-16
Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 1
Query:   40 DDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            D  KS   +Q+ LEK+FGQS VFVAS  MENGG+ ++A+  +LL+EAI VISCGYEDKTEWG E+
Sbjct:  696 DAAKSPEAAQLKLEKKFGQSPVFVASAGMENGGLARNASPASLLREAIQVISCGYEDKTEWGKEI 760          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.870e-22
Identity = 58/117 (49.57%), Postives = 69/117 (58.97%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLS----------GMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMH RGW+S+YC P R A  GSAPINLSDRL+Q  R     W   SV   +S          G + W    +    +     +  T+IPLL YCT+P VC
Sbjct:  751 EIGWIYGSVTEDILTGFKMHCRGWKSVYCTPARAAFKGSAPINLSDRLHQVLR-----WALGSVEIFMSRHCPLWYAYGGRLKWLERFAYTNTI----VYPFTSIPLLAYCTIPAVC 858          

HSP 2 Score: 95.5153 bits (236), Expect = 4.651e-19
Identity = 47/70 (67.14%), Postives = 58/70 (82.86%), Query Frame = 1
Query:   34 GFDD-EKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHE--TLLKEAIHVISCGYEDKTEWGSEV 234
            G+D+ E+S LMSQ S EKRFGQS VF+ASTL+E+GG+PQ A  +   L+KEAIHVISCGYE+KTEWG E+
Sbjct:  683 GYDELERSSLMSQKSFEKRFGQSPVFIASTLVEDGGLPQGAAADPAALIKEAIHVISCGYEEKTEWGKEI 752          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.913e-21
Identity = 55/113 (48.67%), Postives = 71/113 (62.83%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWW----SIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMH+ GWRS+YC PK  A  GSAPINLSDRL+Q  R     W   SV   LS    +W+     ++    +       +  T++PL++YC+LP +C
Sbjct:  774 EIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKLAAFKGSAPINLSDRLHQVLR-----WALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSLPLIVYCSLPAIC 881          

HSP 2 Score: 87.0409 bits (214), Expect = 1.654e-16
Identity = 43/67 (64.18%), Postives = 51/67 (76.12%), Query Frame = 1
Query:   34 GFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G + E+S    QM LEK+FGQS VFVAS  MENGG+ ++A+   LLKEAI VISCGYEDKTEWG E+
Sbjct:  709 GSNVEQSTEAMQMKLEKKFGQSPVFVASARMENGGMARNASPACLLKEAIQVISCGYEDKTEWGKEI 775          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.002e-18
Identity = 35/53 (66.04%), Postives = 46/53 (86.79%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR 666
            +IGWIYGSVTED++TG++MH RGW+S+YC+ KR A  G+APINL+DRL+Q  R
Sbjct:  837 RIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLR 889          

HSP 2 Score: 27.7202 bits (60), Expect = 7.002e-18
Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  657 VLXWALGSVEILFSRH 704
            VL WA GSVEI FSR+
Sbjct:  887 VLRWATGSVEIFFSRN 902          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.552e-17
Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR-GL*XLWKFFSVGTVLSGMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTED++TG++MH RGWRS+YC+ KR A  G+APINL+DRL+Q  R     +  FFS    +       ++    V       +  T+I L++YC LP +C
Sbjct:  730 RIGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAM--FATRRLKFLQRVAYLNVGIYPFTSIFLVVYCFLPALC 835          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.267e-16
Identity = 47/107 (43.93%), Postives = 68/107 (63.55%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR-GL*XLWKFFSVGTVLSGMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTV 825
            +IGWIYGSVTED++TG++MH RGW+S+YC+ KR A  G+APINL+DRL+Q  R     +  FFS    L  +    ++I   +       +  T+I L++YC LP +
Sbjct:  837 RIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL--LASSKMKILQRIAYLNVGIYPFTSIFLIVYCFLPAL 941          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.822e-16
Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG----MVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTV 825
            ++GWIYGSVTED++TG++MH RGWRSIYC+ KR A  G+APINL+DRL+Q  R     W   SV    S          ++    V       +  T++ L++YC LP +
Sbjct:  873 RVGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLR-----WATGSVEIFFSRNNAIFATRRMKFLQRVAYFNVGMYPFTSLFLIVYCILPAI 977          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.579e-16
Identity = 35/53 (66.04%), Postives = 46/53 (86.79%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR 666
            ++GWIYGSVTED++TG++MH RGWRS+YC+ KR +  GSAPINL+DRL+Q  R
Sbjct:  798 RVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDSFRGSAPINLTDRLHQVLR 850          

HSP 2 Score: 21.1718 bits (43), Expect = 3.579e-16
Identity = 8/15 (53.33%), Postives = 12/15 (80.00%), Query Frame = 2
Query:  731 RLKFLEKFAYVDTTI 775
            RLKFL++ AY++  I
Sbjct:  871 RLKFLQRLAYLNVGI 885          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.685e-16
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR-GL*XLWKFFSVGTV---------LSGMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTV 825
            ++GWIYGSVTED++TG++MH RGWRS+YC+ +R A  G+APINL+DRL+Q  R     +  FFS             L  M + ++ I           +  T++ L+MYC LP +
Sbjct:  706 RVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVLASRRLKFLQRMAYLNVGI-----------YPFTSLFLIMYCLLPAL 810          
The following BLAST results are available for this feature:
BLAST of EY659256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
CESA5_ORYSI1.183e-2252.63Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA5_ARATH1.545e-2251.33Cellulose synthase A catalytic subunit 5 [UDP-form... [more]
CESA7_ORYSJ5.870e-2249.57Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA6_ARATH2.913e-2148.67Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CSLD3_ARATH7.002e-1866.04Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]
CSLD1_ARATH2.552e-1744.44Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLD2_ARATH1.267e-1643.93Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD5_ARATH2.822e-1642.73Cellulose synthase-like protein D5 OS=Arabidopsis ... [more]
CSLD4_ARATH3.579e-1666.04Cellulose synthase-like protein D4 OS=Arabidopsis ... [more]
CSLD5_ORYSJ3.685e-1640.52Cellulose synthase-like protein D5 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659256 ID=EY659256; Name=EY659256; organism=Citrus sinensis; type=EST; length=939bp
CCACGCGTCCGCATATTTGCCTACGCAGGTGCTGGATTTGATGATGAAAA
GTCACTACTTATGTCACAAATGAGCCTGGAGAAGCGATTTGGTCAATCAG
CTGTTTTTGTTGCTTCTACACTTATGGAGAATGGTGGTGTTCCACAGTCT
GCAACACATGAAACTCTTCTTAAGGAGGCCATTCATGTTATCAGTTGTGG
TTACGAGGATAAAACAGAATGGGGATCTGAGGTATGTTGTCTGATTTAAC
AGACACTGATGTATTTCCAAGTTTCTGTCTATATAAAGTGACTGTGTGAA
TCTAAGCAACTGAAATGACTCATTGTTCATCGAACCATTTCTACTATGCT
ACTGAATGACCCCTTGCGATGTTATTATAATTCCAGTTCATCTGTAAATA
ATATGGCACACCCACCAACACACATTTCTTATTGAAGAAATAACTTGCAT
TCTCTTTGTTATCATTTCAGTTTCTCTTGCAAACACCGATTTTTGTCTCT
TGCTCTGCAGATAGGATGGATTTATGGTTCTGTTACGGAAGATATTCTTA
CAGGATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTACTGCATGCCT
AAGCGCCCAGCCCTTTAAGGGTCTGCTCCTATTAATCTTTCAGATCGTCT
AAACCAGTGCTNNCGTGGGCTCTAGGNTCTGTGGAAATTCTTTTCAGTCG
GCACTGTCCTATCTGGTATGGTATGGTGGTCGATTGAAATTTCTTGAGAA
GTTTGCCTATGTTGACACCACTATCATTCTCTCACTGCAATTCCTCTTCT
CATGTATTGCACGCTGCCAACTGTCTGTCTATTAACGAACAGTTCATTAT
GCTCAAGTATTTNATCATTACCATTACTCACTTTTTACCTTTTTATTTTT
CAGGTTGTGAAAATGACTCCTACCCTAAATTCTTTTGTT
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