EY659254

Overview
NameEY659254
Unique NameEY659254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_PORPU (Nitrogen regulatory protein P-II OS=Porphyra purpurea GN=glnB PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.456e-23
Identity = 54/105 (51.43%), Postives = 77/105 (73.33%), Query Frame = 3 
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGE 497
            K+EAI+RP+++ +V  AL+  GI G+TV  V GFG Q G TER+ GSE+S D  + K+K+EI+VS D+V  + + I++ A+TGEIGDGKIF+  V  VIR+RT +
Sbjct:    3 KIEAIIRPFKLNEVKLALVKGGIGGMTVVKVSGFGRQKGQTERYKGSEYSID-IIDKIKIEIIVSDDKVNSITEIIIKTAKTGEIGDGKIFISDVEQVIRIRTND 106
[Close]
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_KLEOX (Nitrogen regulatory protein P-II OS=Klebsiella oxytoca GN=glnB PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.456e-23
Identity = 54/110 (49.09%), Postives = 81/110 (73.64%), Query Frame = 3 
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            K++AI++P+++  V  AL  +GI G+TV++V+GFG Q G TE + G+E+  D F+ KVK+EIVV+ D V+  +D I+  A+TG+IGDGKIF+  V+ VIR+RTGE  + A
Sbjct:    3 KIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVD-FLPKVKIEIVVTDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAA 111
[Close]
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: Y059_METJA (Uncharacterized nitrogen regulatory PII-like protein MJ0059 OS=Methanocaldococcus jannaschii GN=MJ0059 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.738e-23
Identity = 57/110 (51.82%), Postives = 78/110 (70.91%), Query Frame = 3 
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            KVEAI+RP +++ V  AL + G  G+TVS+V+G G QGG  ER+ G E+  D  + KVK+E+VV ++ V+ VID I E ARTG  GDGKIF++PV  V+RVRT E  ++A
Sbjct:    3 KVEAIIRPEKLEIVKKALSDAGYVGMTVSEVKGRGVQGGIVERYRGREYIVD-LIPKVKIELVVKEEDVDNVIDIICENARTGNPGDGKIFVIPVERVVRVRTKEEGKEA 111
[Close]
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_SHIFL (Nitrogen regulatory protein P-II 1 OS=Shigella flexneri GN=glnB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.272e-22
Identity = 54/110 (49.09%), Postives = 80/110 (72.73%), Query Frame = 3 
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            K++AI++P+++  V  AL  +GI G+TV++V+GFG Q G TE + G+E+  D F+ KVK+EIVV  D V+  +D I+  A+TG+IGDGKIF+  V+ VIR+RTGE  + A
Sbjct:    3 KIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVD-FLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAA 111
[Close]
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_SALTY (Nitrogen regulatory protein P-II 1 OS=Salmonella typhimurium GN=glnB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.272e-22
Identity = 54/110 (49.09%), Postives = 80/110 (72.73%), Query Frame = 3 
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            K++AI++P+++  V  AL  +GI G+TV++V+GFG Q G TE + G+E+  D F+ KVK+EIVV  D V+  +D I+  A+TG+IGDGKIF+  V+ VIR+RTGE  + A
Sbjct:    3 KIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVD-FLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAA 111
[Close]
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_SALTI (Nitrogen regulatory protein P-II 1 OS=Salmonella typhi GN=glnB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.272e-22
Identity = 54/110 (49.09%), Postives = 80/110 (72.73%), Query Frame = 3 
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            K++AI++P+++  V  AL  +GI G+TV++V+GFG Q G TE + G+E+  D F+ KVK+EIVV  D V+  +D I+  A+TG+IGDGKIF+  V+ VIR+RTGE  + A
Sbjct:    3 KIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVD-FLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAA 111
[Close]
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_ECOLI (Nitrogen regulatory protein P-II 1 OS=Escherichia coli (strain K12) GN=glnB PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.272e-22
Identity = 54/110 (49.09%), Postives = 80/110 (72.73%), Query Frame = 3 
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            K++AI++P+++  V  AL  +GI G+TV++V+GFG Q G TE + G+E+  D F+ KVK+EIVV  D V+  +D I+  A+TG+IGDGKIF+  V+ VIR+RTGE  + A
Sbjct:    3 KIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVD-FLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAA 111
[Close]
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_ECOL6 (Nitrogen regulatory protein P-II 1 OS=Escherichia coli O6 GN=glnB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.272e-22
Identity = 54/110 (49.09%), Postives = 80/110 (72.73%), Query Frame = 3 
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            K++AI++P+++  V  AL  +GI G+TV++V+GFG Q G TE + G+E+  D F+ KVK+EIVV  D V+  +D I+  A+TG+IGDGKIF+  V+ VIR+RTGE  + A
Sbjct:    3 KIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVD-FLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAA 111
[Close]
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_ECO57 (Nitrogen regulatory protein P-II 1 OS=Escherichia coli O157:H7 GN=glnB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.272e-22
Identity = 54/110 (49.09%), Postives = 80/110 (72.73%), Query Frame = 3 
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            K++AI++P+++  V  AL  +GI G+TV++V+GFG Q G TE + G+E+  D F+ KVK+EIVV  D V+  +D I+  A+TG+IGDGKIF+  V+ VIR+RTGE  + A
Sbjct:    3 KIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVD-FLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAA 111
[Close]
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: Y1344_METJA (Uncharacterized nitrogen regulatory PII-like protein MJ1344 OS=Methanocaldococcus jannaschii GN=MJ1344 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.169e-22
Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 3 
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGE 497
            KVEAI+RP +++ V  AL + G  G+TVS+V+G G QGG  ER+ G E+  D  + KVK+E+VV ++ V+ VID I E ARTG  GDGKIF++PV  V+RVRT E
Sbjct:    3 KVEAIIRPEKLEIVKKALSDAGYVGMTVSEVKGRGVQGGIVERYRGREYIVD-LIPKVKIELVVKEEDVDNVIDIICENARTGNPGDGKIFVIPVERVVRVRTKE 106
The following BLAST results are available for this feature:
BLAST of EY659254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
GLNB_PORPU7.456e-2351.43Nitrogen regulatory protein P-II OS=Porphyra purpu... [more]
GLNB_KLEOX7.456e-2349.09Nitrogen regulatory protein P-II OS=Klebsiella oxy... [more]
Y059_METJA9.738e-2351.82Uncharacterized nitrogen regulatory PII-like prote... [more]
GLNB_SHIFL1.272e-2249.09Nitrogen regulatory protein P-II 1 OS=Shigella fle... [more]
GLNB_SALTY1.272e-2249.09Nitrogen regulatory protein P-II 1 OS=Salmonella t... [more]
GLNB_SALTI1.272e-2249.09Nitrogen regulatory protein P-II 1 OS=Salmonella t... [more]
GLNB_ECOLI1.272e-2249.09Nitrogen regulatory protein P-II 1 OS=Escherichia ... [more]
GLNB_ECOL61.272e-2249.09Nitrogen regulatory protein P-II 1 OS=Escherichia ... [more]
GLNB_ECO571.272e-2249.09Nitrogen regulatory protein P-II 1 OS=Escherichia ... [more]
Y1344_METJA2.169e-2253.33Uncharacterized nitrogen regulatory PII-like prote... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659254 ID=EY659254; Name=EY659254; organism=Citrus sinensis; type=EST; length=827bp
CGTTTACTCCGCTCAACTTCTCTTCTCATCTCAAAGAACTTCCTCTTGTA
AATTTCGGCTCCGTGCGGCCAAGTTTGAGAATTTCTCGACTTTCTAGGCT
CAAATGCACAAGAAATGTATCAAATCTTCATGTTATCAGAGCCCAGAGCT
CACCTGATTATATTCCTGATTCTAAGTTTTACAAAGTGGAAGCCATTCTC
AGGCCCTGGAGAGTCCAGCAGGTTTCTTCGGCTTTGCTGAATATGGGTAT
CCGTGGTGTCACGGTTTCTGATGTTCGAGGTTTTGGTGCTCAAGGTGGCT
CAACAGAAAGGCATGGTGGCTCTGAATTTTCTGAGGATAAATTTGTTGCT
AAAGTGAAGATGGAGATTGTGGTGAGCAAAGACCAGGTGGAAGGAGTAAT
TGATAAAATTATGGAGGAGGCAAGGACTGGAGAAATTGGTGACGGCAAGA
TTTTTTTGGTACCTGTCTCAGATGTCATAAGAGTTCGAACTGGTGAACGA
TGTGAAAAAGCTGATAGGATGGCAGGAGGATGGTCGGACATATCTTCAGC
TGTGTGACCTTGTACTGATTTGTCGTATGATTTTGAAGCAAGATTAACAT
CAAAACCTCTTAAGGTTTAGAAGTTTATTGTGCCATTATTCTGTCCTGCA
TGGGCTTGATAAAAAAACCAGATTAAAAAACTGGCATTGGGCCTGCATCT
ACAAGACAGGTTTCCTTTTCTTAAAAAAGGAGAGAGGGAGAAAGGAGATT
TCCTACCCTTTTTTATGATTTAAATCCTCAACCCAAAAAAAGAATTTCTA
GCCTTATCAGTNAAAAAAAAAAAAAAA
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