EY659253

Overview
NameEY659253
Unique NameEY659253
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659253 vs. ExPASy Swiss-Prot
Match: BACE2_MOUSE (Beta-secretase 2 OS=Mus musculus GN=Bace2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 56/207 (27.05%), Postives = 90/207 (43.48%), Query Frame = 3
Query:   48 YFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLA--KFDGILGLGFQEISV-GKAVPVWYNMVNQGLVNEPVFSFWFNRNA-----DEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCA---GGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQ 635
            Y  + + S  SSTY   G    + Y  G+ +GF  ED V I            AT   S  F L   K++GILGL +  ++    ++  +++ +        +FS                GG +V GG++P  YKG+  Y P+ ++ Y+Q ++  + I GQ             AI DSGT+LL  P  +   V  A+  T ++ +
Sbjct:  121 YIDTYFDSESSSTYHSKGFDVTVKYTQGSWTGFVGEDLVTIPKGFNSSFLVNIATIFESENFFLPGIKWNGILGLAYAALAKPSSSLETFFDSLVAQAKIPDIFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQNLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARTSLIPE 327          
BLAST of EY659253 vs. ExPASy Swiss-Prot
Match: CARP_CANTR (Candidapepsin OS=Candida tropicalis GN=SAPT1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11
Identity = 53/197 (26.90%), Postives = 90/197 (45.69%), Query Frame = 3
Query:   45 CYFHSKYRSGRSSTYKKNGKSADIHYGTGAIS-GFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG----KAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT 620
            C     +    SS+ +   +   I YG    S G F +D V  G + +K+Q+F + T         +   GI+G+GF  +  G      VPV   +  QG++N+  +S   + N+++   G+I+FGG+D   Y G  T +PVT     +  +G +  DG +    A     + DSGT++     +   +    +GAT
Sbjct:  119 CKQEGTFDPSSSSSAQNLNQDFSIEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTT-------SVDQGIMGIGFTAVEAGYNLYSNVPV--TLKKQGIINKNAYSC--DLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVSTNAD---VVLDSGTTITYFSQSTADKFARIVGAT 301          
BLAST of EY659253 vs. ExPASy Swiss-Prot
Match: CARP_IRPLA (Polyporopepsin OS=Irpex lacteus PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 57/218 (26.15%), Postives = 88/218 (40.37%), Query Frame = 3
Query:    3 NLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVP--------VWYNMVNQGLVNEPVFSFWFNRNADEEE-GGEIVFGGMDPDHYKGEHTYVPVTQ----KGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGA 617
            N W+ + K Y              ++ST         + YG+G+ SG    D V +G L +  Q    A+R+     +    DGILG+G  +++VG   P        V  N+ +QG +   + +  F     E    GE+ FG  D   Y G  TY P+T       YW   +   +  G +T   +   A I D+GT+L    +    +   A GA
Sbjct:   37 NTWLGADKSYV-------------KTSTSSATSDKVSVTYGSGSFSGTEYTDTVTLGSLTIPKQSIGVASRDSGFDGV----DGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYW--GINQTIRYGSSTSILS-STAGIVDTGTTLTLIASDAFAKYKKATGA 234          
The following BLAST results are available for this feature:
BLAST of EY659253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
BACE2_MOUSE4.515e-1127.05Beta-secretase 2 OS=Mus musculus GN=Bace2 PE=2 SV=... [more]
CARP_CANTR5.897e-1126.90Candidapepsin OS=Candida tropicalis GN=SAPT1 PE=1 ... [more]
CARP_IRPLA7.701e-1126.15Polyporopepsin OS=Irpex lacteus PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-A12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659253 ID=EY659253; Name=EY659253; organism=Citrus sinensis; type=EST; length=917bp
CAAATTTGTGGGTGCCCTCTTCTAAGTGTTATTTCTCGATTGCATGCTAT
TTCCATTCCAAGTACAGGTCAGGCCGCTCAAGTACCTACAAGAAGAATGG
TAAATCGGCTGATATCCATTATGGAACTGGAGCTATTTCTGGTTTTTTTA
GTGAAGACCATGTCAAAATCGGTGATCTTGTGGTCAAAGATCAGGAATTT
ATTGAGGCAACTAGGGAGCCCAGCCTCACTTTCTTGCTGGCCAAGTTTGA
TGGCATACTTGGACTTGGCTTCCAAGAGATTTCTGTTGGAAAGGCTGTGC
CCGTGTGGTACAATATGGTAAATCAAGGCCTTGTCAATGAACCAGTTTTC
TCCTTTTGGTTTAACCGAAATGCTGATGAGGAAGAAGGAGGTGAAATTGT
TTTTGGTGGGATGGACCCTGACCATTACAAGGGTGAGCACACATATGTTC
CTGTCACACAGAAAGGATATTGGCAGTTTGATATGGGTGATGTCATGATT
GATGGCCAAACAACAGGATTTTGCGCTGGCGGCTGTGCCGCAATTGCTGA
TTCAGGAACCTCTTTGTTGGCTGGCCCTACGACCATCATAACTCAAGTCA
ACCATGCCATTGGAGCCACTGGAATTGTCAGTCAAGAATGCAAGGCTGTA
GTTTCACAATATGGAGGAGAGATCATCAATATGCTTTTAGCTAAGGATGA
ACCTCAAAAAATTTGCTCACAGATTGGTTTGTGCACATTTGATGGGTCTC
GAGGTGTGAGTATGGGCATTGAGAGTGTCGTTCCTGAGAATATCATANAC
ATCTGGTGGGTTCCATGATGCATGTGCTCTACTGTGAGATGGCAGTTGGT
GGATGCAAACCACCTTAGCAGACCAACACCAGAGCGCTTCTTACTTGTCA
AGAACTCTGGAATCGTT
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