EY659250

Overview
NameEY659250
Unique NameEY659250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659250 vs. ExPASy Swiss-Prot
Match: HUB1_DEBHA (Ubiquitin-like modifier HUB1 OS=Debaryomyces hansenii GN=HUB1 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.236e-21
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1
Query:   70 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 288
            MIEV+ NDRLGKK++VKC   DTIGDLKK+++ Q GT  +KI ++K Y +YKDHITL DYE+H+G   ELYYS
Sbjct:    1 MIEVLANDRLGKKIKVKCMPTDTIGDLKKIISLQIGTSYEKIVLKKGYQVYKDHITLDDYEVHNGFNFELYYS 73          
BLAST of EY659250 vs. ExPASy Swiss-Prot
Match: HUB1_CANGA (Ubiquitin-like modifier HUB1 OS=Candida glabrata GN=HUB1 PE=4 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.009e-21
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1
Query:   70 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 288
            MIEV++NDRLGKK+RVKC EDDT+GD KK+++ Q G +  KI +QK  ++ KDHITL DYE+HD   LELYYS
Sbjct:    1 MIEVLVNDRLGKKIRVKCLEDDTVGDFKKVLSVQLGMQPSKIVLQKGGSVLKDHITLYDYEVHDNTNLELYYS 73          
BLAST of EY659250 vs. ExPASy Swiss-Prot
Match: HUB1_YEAST (Ubiquitin-like modifier HUB1 OS=Saccharomyces cerevisiae GN=HUB1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.510e-19
Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = 1
Query:   70 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 285
            MIEVV+NDRLGKKVRVKC  +D++GD KK+++ Q GT+ +KI +QK  ++ KDHI+L+DYE+HD   LELYY
Sbjct:    1 MIEVVVNDRLGKKVRVKCLAEDSVGDFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDYEVHDQTNLELYY 72          
BLAST of EY659250 vs. ExPASy Swiss-Prot
Match: HUB1_KLULA (Ubiquitin-like modifier HUB1 OS=Kluyveromyces lactis GN=HUB1 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.510e-19
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1
Query:   70 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGT-RADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 285
            MIEV++NDRLGKKV VKC  +DT+GD KK+++ Q GT  A KI +QK  ++ KDHITL+DYE+HDG  LELYY
Sbjct:    1 MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLEDYEVHDGTNLELYY 73          
BLAST of EY659250 vs. ExPASy Swiss-Prot
Match: UBL5_DICDI (Ubiquitin-like protein 5 OS=Dictyostelium discoideum GN=ubl5 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.496e-19
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 1
Query:   70 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKD--------------YEIHDGMGLELYYS 288
            MIEVV NDRLG KVRVK N DDTIGDLKK+++AQ G +A+KIR+QK Y+I+KD     +              YEIHDG GLELYY+
Sbjct:    1 MIEVVCNDRLGNKVRVKVNSDDTIGDLKKVLSAQIGIKAEKIRLQKSYSIFKDRNNNNNYNNYNNNNNNYYYYYEIHDGDGLELYYN 87          
BLAST of EY659250 vs. ExPASy Swiss-Prot
Match: HUB1_ASHGO (Ubiquitin-like modifier HUB1 OS=Ashbya gossypii GN=HUB1 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.346e-18
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 1
Query:   70 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 285
            MIEV++NDRLGKK+RVKC   D++GDLKK++A Q GT   K+ + K     KDHI+L DYE+HDG  LELYY
Sbjct:    1 MIEVIVNDRLGKKLRVKCLSTDSVGDLKKVLAVQLGTAHGKVALHKGGVNLKDHISLDDYEVHDGTYLELYY 72          
The following BLAST results are available for this feature:
BLAST of EY659250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
HUB1_DEBHA1.236e-2163.01Ubiquitin-like modifier HUB1 OS=Debaryomyces hanse... [more]
HUB1_CANGA8.009e-2163.01Ubiquitin-like modifier HUB1 OS=Candida glabrata G... [more]
HUB1_YEAST1.510e-1961.11Ubiquitin-like modifier HUB1 OS=Saccharomyces cere... [more]
HUB1_KLULA1.510e-1963.01Ubiquitin-like modifier HUB1 OS=Kluyveromyces lact... [more]
UBL5_DICDI7.496e-1957.47Ubiquitin-like protein 5 OS=Dictyostelium discoide... [more]
HUB1_ASHGO6.346e-1859.72Ubiquitin-like modifier HUB1 OS=Ashbya gossypii GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-A09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659250 ID=EY659250; Name=EY659250; organism=Citrus sinensis; type=EST; length=762bp
ATTCACGCCTCGACCCACGCGTCCGAAATCCCAATCATTCGGCAGGGAAA
ATCAAAACAGGAGACAAAGATGATTGAGGTGGTGCTGAACGACAGGCTCG
GGAAGAAGGTGCGCGTGAAGTGCAACGAAGACGACACCATAGGCGACTTG
AAGAAGCTGGTGGCGGCTCAGACCGGGACTCGAGCCGACAAGATTCGGAT
TCAGAAGTGGTACAACATCTACAAGGACCACATCACTCTCAAGGACTACG
AGATTCACGACGGCATGGGCCTCGAACTCTATTACAGCTAAATCCACCGT
TAAATATATATGCTGCTGCAAGCAGTCAATACTACTAGGAACCATATGCC
ATAATAAGCAAGGGGTATTGGAAGATGCGGCAGGGCCAACTTTACTAATA
CTGTCTTGTAAGAAAAAATTTGTGAAGACTTGTAAAAACTTATTTGTGGT
TATGTAACATATCTGGGATCTGGACTTACTCTCCATTTTGAATGGTGTTT
AGATCTTTATCAAGGTATTGAGGTACCACATACTTGTCAGTCCATTAGGC
TGATAGAATTTTGTGAATACCTTGGCTAAGTGTGTGCCATCTTTCTTGCA
TAAAAATGGTAGATGATCCATTAGTGAGTTGCTGTGTATGTCTATCTTGT
ATATCAACTACAAAACTTGTGTGGTTGATTTCTGCAGGTGGTGCANAAAA
GGCGATGAGAGTTGAGCTTATTATTTTTTACCAAATTGACAAACCTTTTG
GGNNTNNAAAAA
back to top