EY659182

Overview
NameEY659182
Unique NameEY659182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2063 contig Csv1_Contig2063:121..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CBS_HUMAN (Cystathionine beta-synthase OS=Homo sapiens GN=CBS PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.036e-25
Identity = 70/151 (46.36%), Postives = 92/151 (60.93%), Query Frame = 1
Query:  127 IAKDVTELIGKTPLVYLNRIVD--GCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDP-AR--GMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            I  D+ + IG TP+V +N+I    G    + AK E      SVKDRI   MI DAE  G ++PG+++ IEPTSGNTGIGLA  AA +GYR II MP  MS E+  VL A GAE+V T   AR    +  V  A  ++++ PNS++L Q+ N
Sbjct:   76 ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRN 225          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CBS_MACFA (Cystathionine beta-synthase OS=Macaca fascicularis GN=CBS PE=2 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 3.965e-25
Identity = 69/151 (45.70%), Postives = 92/151 (60.93%), Query Frame = 1
Query:  127 IAKDVTELIGKTPLVYLNRIVD--GCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDP-AR--GMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            I  D+ + IG TP++ +N+I    G    + AK E      SVKDRI   MI DAE  G ++PG+++ IEPTSGNTGIGLA  AA +GYR II MP  MS E+  VL A GAE+V T   AR    +  V  A  ++++ PNS++L Q+ N
Sbjct:   76 ILPDILKKIGDTPMIRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLKPGDTI-IEPTSGNTGIGLALTAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRN 225          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSM_PSEAE (Cysteine synthase B OS=Pseudomonas aeruginosa GN=cysM PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.507e-24
Identity = 64/142 (45.07%), Postives = 87/142 (61.27%), Query Frame = 1
Query:  139 VTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            + + +G TPLV L R+       +  KLE   P  SVKDR   SMI  AE +G IRPG++ LIE TSGNTGI LA  AA KGY++I+ MP + + ER+  + A+GAEL+L     GM+GA   A++++ +     VL QF N
Sbjct:    8 IADCVGNTPLVRLQRLPGETSNTLLVKLEGNNPAGSVKDRPALSMITRAELRGDIRPGDT-LIEATSGNTGIALAMAAAIKGYKMILIMPDNSTAERKAAMTAYGAELILVSKEEGMEGARDLADKLQ-REGRGKVLDQFAN 147          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSM_MYCTU (Cysteine synthase B OS=Mycobacterium tuberculosis GN=cysM PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.384e-24
Identity = 65/147 (44.22%), Postives = 86/147 (58.50%), Query Frame = 1
Query:  145 ELIGKTPLVYLNRIV-------DGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            + +G TPLV L R+        DG   R+ AKLE   P  S+KDR    MI  AE  GL+RPG ++L EPTSGNTGI LA  A  KGYRLI  MP + S+ERR +L  +GA+++ +    G   AV  A+E+    P+  +L Q+ N
Sbjct:    9 QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGN 154          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSM_MYCBO (Cysteine synthase B OS=Mycobacterium bovis GN=cysM PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.384e-24
Identity = 65/147 (44.22%), Postives = 86/147 (58.50%), Query Frame = 1
Query:  145 ELIGKTPLVYLNRIV-------DGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            + +G TPLV L R+        DG   R+ AKLE   P  S+KDR    MI  AE  GL+RPG ++L EPTSGNTGI LA  A  KGYRLI  MP + S+ERR +L  +GA+++ +    G   AV  A+E+    P+  +L Q+ N
Sbjct:    9 QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGN 154          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSM_PSESY (Cysteine synthase B (Fragment) OS=Pseudomonas syringae pv. syringae GN=cysM PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.726e-24
Identity = 65/142 (45.77%), Postives = 84/142 (59.15%), Query Frame = 1
Query:  139 VTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            + + +G TPLV L R+       +  KLE   P  SVKDR   SMI  AE +G I PG++ LIE TSGNTGI LA  AA KGYR+I+ MP + S ER+  + A+GAEL+      GM+GA   AE ++ +     VL QF N
Sbjct:    8 IADCVGNTPLVRLQRMAGNTSNTLLLKLEGNNPAGSVKDRPALSMITRAELRGQIHPGDT-LIEATSGNTGIALAMAAAIKGYRMILIMPDNSSAERKAAMTAYGAELISVSKDDGMEGARDLAERMQAE-GRGKVLDQFAN 147          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSM_AQUAE (Cysteine synthase OS=Aquifex aeolicus GN=cysM PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.726e-24
Identity = 65/146 (44.52%), Postives = 90/146 (61.64%), Query Frame = 1
Query:  139 VTELIGKTPLVYLNRIVDGCV---ARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYV-LQQFEN 564
            + +L+G TPLV + + +   +     I AKLE   P  SVKDR   SM  DA ++GLI+ G+ V+I+ TSGNTGI LA + AA G  + + MPA++S ER+ ++ AFGA+L LTDP  G  GA+    E+  K P  YV L Q+ N
Sbjct:   25 ILKLVGNTPLVRVKKCLPEDIPEDVEIWAKLESFNPGGSVKDRPALSMFLDALKRGLIKEGK-VVIDATSGNTGIALAMVGAALGVPVELAMPANVSEERKKIIKAFGAKLYLTDPLEGTDGAILFVRELVQKYPEKYVYLDQYNN 169          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSK_EMENI (Cysteine synthase OS=Emericella nidulans GN=cysB PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.490e-19
Identity = 59/145 (40.69%), Postives = 83/145 (57.24%), Query Frame = 1
Query:  139 VTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGM---KGAVQKAEEIRDKTPNSYVLQQFEN 564
            +TE IG TPL+ L R+ +   + I AK E   P  SVKDR    ++ DAEE+GL++PG +V +E T+GNTGIGLA +  +KGY+L+I MP + S  +  +L   GAE V   PA      +    KA    +   N+    QF+N
Sbjct:   36 LTEAIGNTPLIRLKRLSEETGSNILAKAEFQNPGGSVKDRAALYVVKDAEERGLLKPGGTV-VEGTAGNTGIGLAHVCRSKGYKLVIYMPNTQSQGKIDLLRLLGAE-VYPVPAVAFDNPENYNHKARRHAESLDNAVWTNQFDN 178          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSM_HELPY (Cysteine synthase OS=Helicobacter pylori GN=cysM PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.236e-18
Identity = 53/149 (35.57%), Postives = 90/149 (60.40%), Query Frame = 1
Query:  124 VIAKDVTELIGKTPLV-YLNRIVDGCV-ARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            +I   + + IG+TP+  + N+     + + I AKLE + P  SVKDR+G  +I +  + G I   ++ +IEPT+GNTGI LA +A     + I  +P   S E++ ++ A GA ++ T  + G+ GA++K++E+ +  P+SY+  QFEN
Sbjct:    2 MIITTMQDAIGRTPVFKFTNKDYPIPLNSAIYAKLEHLNPGGSVKDRLGQYLIGEGFKTGKIT-SKTTIIEPTAGNTGIALALVAIKHHLKTIFVVPEKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFEN 149          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSM_HELPJ (Cysteine synthase OS=Helicobacter pylori J99 GN=cysM PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18
Identity = 53/149 (35.57%), Postives = 85/149 (57.05%), Query Frame = 1
Query:  124 VIAKDVTELIGKTPLVYLNR--IVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            +I   + + IG+TP+    R        + I AKLE + P  SVKDR+G  +I +A     I    + +IEPT+GNTGI LA +A     + I  +P   S E++ ++ A GA ++ T  + G+ GA++K++E+ +  P+SY+  QFEN
Sbjct:    1 MILTAMQDAIGRTPIFKFTRKDYPIPLKSAIYAKLEHLNPGGSVKDRLGQYLIKEAFRTRKIT-STTTIIEPTAGNTGIALALVAIKHHLKTIFVVPKKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFEN 148          
The following BLAST results are available for this feature:
BLAST of EY659182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CBS_HUMAN3.036e-2546.36Cystathionine beta-synthase OS=Homo sapiens GN=CBS... [more]
CBS_MACFA3.965e-2545.70Cystathionine beta-synthase OS=Macaca fascicularis... [more]
CYSM_PSEAE1.507e-2445.07Cysteine synthase B OS=Pseudomonas aeruginosa GN=c... [more]
CYSM_MYCTU4.384e-2444.22Cysteine synthase B OS=Mycobacterium tuberculosis ... [more]
CYSM_MYCBO4.384e-2444.22Cysteine synthase B OS=Mycobacterium bovis GN=cysM... [more]
CYSM_PSESY5.726e-2445.77Cysteine synthase B (Fragment) OS=Pseudomonas syri... [more]
CYSM_AQUAE5.726e-2444.52Cysteine synthase OS=Aquifex aeolicus GN=cysM PE=3... [more]
CYSK_EMENI2.490e-1940.69Cysteine synthase OS=Emericella nidulans GN=cysB P... [more]
CYSM_HELPY1.236e-1835.57Cysteine synthase OS=Helicobacter pylori GN=cysM P... [more]
CYSM_HELPJ3.595e-1835.57Cysteine synthase OS=Helicobacter pylori J99 GN=cy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-C10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659182 ID=EY659182; Name=EY659182; organism=Citrus sinensis; type=EST; length=566bp
TTGTTTTTCAATTTTCTACTGTTTTCCAGCTGCCTTGACATTGTTTACGA
TTCTTCCCAGAGAAAGCTTTCACGTTCGCTTGTAACTTGAAAAAAAGAAA
AAAAAATGGTGGAGGAGAAGTCCGTGATTGCGAAAGATGTCACTGAATTG
ATTGGTAAAACACCATTGGTGTATCTCAACCGCATTGTGGATGGTTGCGT
TGCTAGAATTGCTGCCAAGCTGGAGATGATGGAACCCTGCTCTAGCGTCA
AAGATAGAATTGGATACAGTATGATCGCTGATGCAGAGGAGAAGGGTCTC
ATTAGACCAGGCGAGAGTGTCCTGATTGAGCCTACCAGCGGTAATACTGG
CATAGGGTTGGCATTCATGGCAGCTGCTAAGGGTTACAGACTTATAATTA
CCATGCCTGCTTCAATGAGTCTTGAAAGAAGAATGGTTCTCCTAGCTTTT
GGAGCTGAGCTTGTGCTCACTGATCCTGCCAGGGGCATGAAGGGAGCTGT
TCAGAAGGCAGAAGAGATAAGGGACAAGACACCGAATTCCTATGTCCTTC
AGCAGTTTGAAAACCC
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