EY659180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL1J_ARATH (RING-H2 finger protein ATL1J OS=Arabidopsis thaliana GN=ATL1J PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.059e-16 Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 2 Query: 317 PAVTLRAGLDPAILRKIPVVAFNQQDFKDGL--ECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRN 544 P + G+ LR PVV+++++ G+ EC +CLS+ GE+ RLLPKCNHGFHV CID W Q H TCP CR+ Sbjct: 101 PRSSSNKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRH 178
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL1A_ARATH (RING-H2 finger protein ATL1A OS=Arabidopsis thaliana GN=ATL1A PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.587e-16 Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQQDF--------KDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERS 565 GLD + +R IPV F ++D K+ EC+VCL+E ++ EK R++P C H FH++CID+W Q ++ CPLCR V E S Sbjct: 101 GLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEAS 184
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL5K_ARATH (RING-H2 finger protein ATL5K OS=Arabidopsis thaliana GN=ATL5K PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.991e-16 Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 311 QDPAVT----LRA-GLDPAILRKIPVVAFNQQ-DFKDGL--------------ECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERS 565 QDP + LR+ GLD +++R IP+ F ++ D DG+ EC+VCLSE +D EK R++P C+H FH++CID+W Q+++ CPLCR V + S Sbjct: 84 QDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTS 188
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL5A_ARATH (RING-H2 finger protein ATL5A OS=Arabidopsis thaliana GN=ATL5A PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.991e-16 Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 2 Query: 332 RAGLDPAILRKIPVVAFNQQDFK-DGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRN 544 RAGL L+K PV + + K ECA+CL E DGE+ R+LP CNH FH+ CID W SHS+CP CR+ Sbjct: 77 RAGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRH 148
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL2H_ARATH (RING-H2 finger protein ATL2H OS=Arabidopsis thaliana GN=ATL2H PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.991e-16 Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQQDFKD-GLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEP---SVEIDIQN 610 GLDP I+R PV ++ K+ G ECA+CLSE D + RL+ C H FH CID+WF+ H TCP+CR +D +G E +V I IQ+ Sbjct: 77 GLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCRCELDPGMIGSGRLESFHNTVTITIQD 171
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL1I_ARATH (RING-H2 finger protein ATL1I OS=Arabidopsis thaliana GN=ATL1I PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.991e-16 Identity = 37/78 (47.44%), Postives = 50/78 (64.10%), Query Frame = 2 Query: 317 PAVTLRAGLDPAILRKIPVVAFNQQDFKDGL--ECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRN 544 P + G++ LR PVV+++ + GL EC +CLS+ GE+ R+LPKC+HGFHV CID W Q H TCP CR+ Sbjct: 102 PCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRH 179
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL2G_ARATH (RING-H2 finger protein ATL2G OS=Arabidopsis thaliana GN=ATL2G PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.825e-16 Identity = 47/131 (35.88%), Postives = 65/131 (49.62%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQQDF----KDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEI-------DIQNSQDSLESGYSTDSPPNFPTNVLFWGNENL 697 GLD + P +++ K G+ECAVCL E ED E RL+P C H FH +C+D+W HSTCPLCR D+ + G+ + S E I +S D E G +S + + W N N+ Sbjct: 106 GLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCR--ADLVLNQQGDDDDSTESYSGTDPGTISSSTDP-ERGMVLESSDAHLLDAVTWSNSNI 233
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL4H_ARATH (Putative RING-H2 finger protein ATL4H OS=Arabidopsis thaliana GN=ATL4H PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.022e-15 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 2 Query: 335 AGLDPAILRKIPVVAF--NQQDFK-DGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDV 556 AGLD +++KI +Q FK +G +C++CL E + E RLLPKCNH FHV CID W +SHS CPLCR + V Sbjct: 152 AGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIV 228
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL3C_ARATH (RING-H2 finger protein ATL3C OS=Arabidopsis thaliana GN=ATL3C PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.743e-15 Identity = 39/77 (50.65%), Postives = 49/77 (63.64%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQQ--DFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVER 562 GL L++IPV + D K EC +CL + EDGEK R+LPKCNHGFHV CID W S S+CP CR + +E+ Sbjct: 88 GLKKQALKQIPVGLYGSGIIDMK-ATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQ 163
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL1R_ARATH (RING-H2 finger protein ATL1R OS=Arabidopsis thaliana GN=ATL1R PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.277e-15 Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = 2 Query: 317 PAVTLRAGLDPAILRKIPVVAFNQQD--FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQDSLESGYSTDSPPNFP 664 P GL +LR +P + ++ + +ECA+CL+E G++ R+LP+C HGFHV CID W SHS+CP CR + V R + G P ++ D P N P Sbjct: 70 PVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQ--REDGPDNLP 185 The following BLAST results are available for this feature:
BLAST of EY659180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659180 ID=EY659180; Name=EY659180; organism=Citrus sinensis; type=EST; length=909bpback to top |