EY659175

Overview
NameEY659175
Unique NameEY659175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 5.648e-12
Identity = 31/89 (34.83%), Postives = 52/89 (58.43%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M     ++   +V  HN     W+I+ G +YD + F+ DHPGG + ++  AG D T +FE + HSD A+++++ Y IG++
Sbjct:  532 LKKSVSSPFMNTASKMYSISEVRKHNTADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFEAI-HSDKAKKLLEDYRIGEL 619          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: FAD5B_DICDI (Delta(5) fatty acid desaturase B OS=Dictyostelium discoideum GN=fadB PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.648e-12
Identity = 35/95 (36.84%), Postives = 60/95 (63.16%), Query Frame = 2
Query:   47 IHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFE-YVGHSDSAREMMDKYYIGDID----PSTVPRKRAYIPLEQ 316
            ++ +D+V+ HN+  D W+I+ GKVY+++ ++  HPGG+++L+ +AG+DATN FE Y   +D    ++ +Y IG I     P  V +   Y  L+Q
Sbjct:   14 LYTWDEVSKHNQKNDLWIIVDGKVYNITKWVPLHPGGEDILLLSAGRDATNLFESYHPMTDKHYSLIKQYEIGYISSYEHPKYVEKSEFYSTLKQ 108          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA_BETVE (Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN=NIA1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.376e-12
Identity = 31/89 (34.83%), Postives = 52/89 (58.43%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M     +    +V  HN  +  W+I+ G +YD + F+ DHPGG + ++  AG D T +F+ + HSD A++M++ Y IG++
Sbjct:  515 LKKSVSSPFMNTSSKMFSMSEVKKHNSAESAWIIVHGHIYDCTHFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAKKMLEDYRIGEL 602          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA_CICIN (Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.634e-12
Identity = 29/89 (32.58%), Postives = 52/89 (58.43%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M          +V  HN     W+++ G +YD +SF+ DHPGG + ++  AG D T +F+ + HSD A++++++Y +G++
Sbjct:  521 LKKSVSSPFMNTTSLTFTMSEVKKHNSADSAWIVVHGHIYDCTSFLKDHPGGSDSILLNAGTDCTEEFDAI-HSDKAKKLLEEYRVGEL 608          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: FAD5A_DICDI (Delta(5) fatty acid desaturase A OS=Dictyostelium discoideum GN=fadA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.634e-12
Identity = 34/81 (41.98%), Postives = 49/81 (60.49%), Query Frame = 2
Query:   50 HQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFE-YVGHSDSAREMMDKYYIGDIDPSTVPR 289
            + + ++A HN   DCW+ + GKVYD++ ++  HPGG EVL+ AAG+D TN FE Y   SD    ++  Y IG I     P+
Sbjct:   16 YSWSELAKHNTENDCWVAVDGKVYDITRWVPLHPGGKEVLLLAAGRDVTNLFESYHPMSDKPTSILKNYEIGYISSYEHPK 96          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.643e-11
Identity = 30/89 (33.71%), Postives = 53/89 (59.55%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M     ++   +V  HN +   W+I+ G +YD S F+ DHPGG + ++  AG D T +F+ + HSD A+++++ + IG++
Sbjct:  523 LKKSISTPFMNTASKMYSMSEVRKHNSSDSAWIIVHGHIYDASRFLKDHPGGVDSILINAGTDCTEEFDAI-HSDKAKKLLEDFRIGEL 610          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA_PHYIN (Nitrate reductase [NADPH] OS=Phytophthora infestans GN=NIAA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.661e-11
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 2
Query:   59 DQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIG 262
            D+VA HN  K CW I    VYD + F+D+HPGG   ++   G D T++FE + HS  A +M+ KY IG
Sbjct:  543 DEVAKHNSKKSCWFICRDLVYDATPFLDEHPGGATSILLCGGTDCTDEFESI-HSTKAWQMLKKYCIG 609          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.661e-11
Identity = 30/89 (33.71%), Postives = 52/89 (58.43%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M     ++   +V  HN     W+I+ G VYD + F+ DHPGG + ++  AG D T +F+ + HSD A+++++ + IG++
Sbjct:  522 LKKSISTPFMNTASKMYSMSEVKKHNSADSAWIIVHGHVYDATRFLKDHPGGIDSILINAGTDCTEEFDAI-HSDKAKKLLEDFRIGEL 609          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA3_MAIZE (Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.661e-11
Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 2
Query:   62 QVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLE 313
            +V  H      W+++ G VYD ++F+ DHPGG + ++  AG D T +F+ + HSD A+E++D Y IGD+  +    +R+  PLE
Sbjct:  527 EVRKHASQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAKELLDTYRIGDLVTTGGAEQRS--PLE 607          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.781e-11
Identity = 31/89 (34.83%), Postives = 51/89 (57.30%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M     +    +V  H+     W+I+ G VYD + F+ DHPGG + ++  AG D T +F+ + HSD A++M++ Y IG++
Sbjct:  500 LKKSVSTPFMNTASKMFSVSEVKKHSSPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDKAKKMLEDYRIGEL 587          
The following BLAST results are available for this feature:
BLAST of EY659175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
NIA1_ARATH5.648e-1234.83Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
FAD5B_DICDI5.648e-1236.84Delta(5) fatty acid desaturase B OS=Dictyostelium ... [more]
NIA_BETVE7.376e-1234.83Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN... [more]
NIA_CICIN9.634e-1232.58Nitrate reductase [NADH] OS=Cichorium intybus GN=N... [more]
FAD5A_DICDI9.634e-1241.98Delta(5) fatty acid desaturase A OS=Dictyostelium ... [more]
NIA_SOLLC1.643e-1133.71Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]
NIA_PHYIN3.661e-1145.59Nitrate reductase [NADPH] OS=Phytophthora infestan... [more]
NIA_PETHY3.661e-1133.71Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
NIA3_MAIZE3.661e-1138.10Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1[more]
NIA2_PHAVU4.781e-1134.83Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659175 ID=EY659175; Name=EY659175; organism=Citrus sinensis; type=EST; length=957bp
TTTAAAAGACCGACCCACGCGTCCGCAAATGGCCTTATATCCAAANATTC
ACCAGTTCGACCAGGTCGCCACGCACAACAAAACTAAGGATTGCTGGCTT
ATTATTTCTGGCAAGGTGTATGATGTGTCCTCGTTCATGGATGATCACCC
TGGAGGAGATGAGGTTTTGATTTCTGCAGCTGGGAAAGATGCAACAAATG
ACTTTGAATATGTGGGTCACAGTGACTCCGCTAGGGAGATGATGGACAAG
TACTATATTGGTGACATTGATCCCTCAACTGTTCCTCGGAAACGTGCATA
TATTCCACTGGAGCAACCTGCTTACAATCAAGACAAGACCCCTGAGTTCA
TTATTAAGATTCTACAGATTCTTGTGCCGCTCTTGATATTGGGTTTAGCC
TTTGTGGTCAGACTCTATACCAAGAAAGAGTGGGTGGCCTTCTCAATAAA
ATGAGTCATCTCCGGAATGGGAAGCTGGTGATTTGCATGAGCTTAGTTCT
AGGACATTGATCTCTTATTTACTTTCCTATGGGGGTTGGTTCTGCTGAAA
TTGAATAGTGGTTCGGTGTCCACCAGAGACCATATTGGCTGTCTTCTCTT
GAGTGGCTTGCTCCTAATGTTTTTCATTGGTGGCCACGGGATAATGTTGA
TTTTTATTGGATCCCTGGATGGAATGCAAGGCATGTTTTTCCTTCTGATC
GAACGCTTTTTCCTGACGAGGGTATTCGTCTTTTATTGGCGGGCGGTATT
ATTCTCCTCCGGTGCTTCATGTTTAAAAAAAAAAAAAAAAGGGCCGGGCG
CCTTAGAGATCCAGCCTTCTTGCCCGCGCGTTCCACGCCTACCTCTTGTT
TTGGTTCCTAAATTAATTATTGGCCTGGCTTTACCCCGGGGACTGGGAAA
ACCTGGCGTCCCCCCTTATCGGCCTGGCCAATTCCCTTTCACCGTGGAGG
AAAAAAA
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