EY659162

Overview
NameEY659162
Unique NameEY659162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ARP3_CHICK (Actin-related protein 3 OS=Gallus gallus GN=ACTR3 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.274e-42
Identity = 94/236 (39.83%), Postives = 133/236 (56.36%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR--------HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 744
            A VVD G+G  K G+AG+  P+ + PS +             + V+ G+   D ++GDEA  K    T K+PI HGIV +WD ME+      +  LR  PE+H  LLTE PLN   NRE   +IMFE+FN P +Y+A+QAVL+L AS  +        TG V+DSGDGV+H +P+ EGY +   I  + +AGRD+T ++ ++L ER          E  + +KE+  YV  D  +E
Sbjct:    7 ACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVVDQAQRRVLKGVDDLDFFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVKE 241          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ARP3_ARATH (Actin-related protein 3 OS=Arabidopsis thaliana GN=ARP3 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.274e-42
Identity = 93/246 (37.80%), Postives = 136/246 (55.28%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 744
            A+V+DNG+G  K GFAG+  P  + P++V                      + GV   +   D Y+GDEA +K        L YPIEHG V +WD ME+ W    +N LR  PE+H  LLTE+PL P  +RE   +I+FETFN P +Y+A+ +VL+L A   T     TG+V+D GDG +H VP+ EGY +   I  + +AG+D+T ++ +++ ERG +       ++ R +KE  CY   D  +E
Sbjct:    8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL---DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSDIVKE 250          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSJ (Actin-related protein 3 OS=Oryza sativa subsp. japonica GN=ARP3 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.130e-41
Identity = 92/247 (37.25%), Postives = 135/247 (54.66%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV-------GRPRHQ------------GVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 744
            A+V+DNG+G  K GFAG+  P  + P++V       G+ R              GVM  +   D ++G++A ++        L YPI +G V NWD ME+ W    +N LR  PE+H  LLTE+PL P   RE   +IMFETFN P +Y+A Q VL+L A   T     TG+V+D GDG +H VP+ +GY +  +I  + + G+D+T ++ ++L ERG         ++ R +KE  CY   D  +E
Sbjct:    8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL---DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTGVVVDVGDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTCSDIVKE 251          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSI (Actin-related protein 3 OS=Oryza sativa subsp. indica GN=ARP3 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 9.130e-41
Identity = 92/247 (37.25%), Postives = 135/247 (54.66%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV-------GRPRHQ------------GVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 744
            A+V+DNG+G  K GFAG+  P  + P++V       G+ R              GVM  +   D ++G++A ++        L YPI +G V NWD ME+ W    +N LR  PE+H  LLTE+PL P   RE   +IMFETFN P +Y+A Q VL+L A   T     TG+V+D GDG +H VP+ +GY +  +I  + + G+D+T ++ ++L ERG         ++ R +KE  CY   D  +E
Sbjct:    8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL---DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTGVVVDVGDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTCSDIVKE 251          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ACTL8_HUMAN (Actin-like protein 8 OS=Homo sapiens GN=ACTL8 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.408e-33
Identity = 89/262 (33.97%), Postives = 139/262 (53.05%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV------ALDFEQEMATAASSSSLEKSYELPDGQVITIGKRKVRCPXSLF 852
            +++D+GSG  KAG AG + P+ VFP+IV   P  +       ++   +G +        T  YPIE G + NW+ ++ +W     N  R   E  PV++TE PL   A+R+KM +I+FE  + P++ +A Q  +SLYASG  TG+V+DSG G++   P ++G  LP +   L+ AG+DL+ YL+K L +         + E V   +   CYV      ALDF +   +A   S+   +Y+LPDG  + +   +   P   F
Sbjct:    6 VIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENPGPSYARRRVSLGIDICHPD---TFSYPIERGRILNWEGVQYLWSFVLENHRR-EQEVPPVIITETPLREPADRKKMLEILFELLHVPSVLLADQLQMSLYASGLLTGVVVDSGYGLTRVQPFHQGRPLPASGKTLEFAGQDLSAYLLKSLFKEDCDRRCLFQLETVAVTQMNKCYVPQNLGEALDFRERQQSALDESN---TYQLPDGSRVELTPMQRVAPEMFF 260          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ACL6B_RAT (Actin-like protein 6B OS=Rattus norvegicus GN=Actl6b PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.561e-32
Identity = 94/298 (31.54%), Postives = 152/298 (51.01%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS-----YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT---TTAEREIVRD-------IKEKLCYVA------------LDFEQEMATAASSSSLEK--------SYELPDGQVITIGKRKVRCPXSLF 852
            +EV ALV D GS   +AG+AG+D P+A FP+ VG       G +   G+K+      ++   A    R    +  P+++G++ +W+    I  HT+   ++  P  HPVL++EAP N +A REK+T++MFE +N PA ++   AVL+ +A+GR+TG+VLDSG   +  +P+++GY L   I++  LAG  ++    ++  E           A +E VR+        KEKL  V+             DF+  +   + S   E+         YE+P+G     G  ++R P  LF
Sbjct:    9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLF 306          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ACL6B_MOUSE (Actin-like protein 6B OS=Mus musculus GN=Actl6b PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.561e-32
Identity = 94/298 (31.54%), Postives = 152/298 (51.01%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS-----YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT---TTAEREIVRD-------IKEKLCYVA------------LDFEQEMATAASSSSLEK--------SYELPDGQVITIGKRKVRCPXSLF 852
            +EV ALV D GS   +AG+AG+D P+A FP+ VG       G +   G+K+      ++   A    R    +  P+++G++ +W+    I  HT+   ++  P  HPVL++EAP N +A REK+T++MFE +N PA ++   AVL+ +A+GR+TG+VLDSG   +  +P+++GY L   I++  LAG  ++    ++  E           A +E VR+        KEKL  V+             DF+  +   + S   E+         YE+P+G     G  ++R P  LF
Sbjct:    9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLF 306          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ACL6B_BOVIN (Actin-like protein 6B OS=Bos taurus GN=ACTL6B PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.561e-32
Identity = 94/298 (31.54%), Postives = 152/298 (51.01%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS-----YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT---TTAEREIVRD-------IKEKLCYVA------------LDFEQEMATAASSSSLEK--------SYELPDGQVITIGKRKVRCPXSLF 852
            +EV ALV D GS   +AG+AG+D P+A FP+ VG       G +   G+K+      ++   A    R    +  P+++G++ +W+    I  HT+   ++  P  HPVL++EAP N +A REK+T++MFE +N PA ++   AVL+ +A+GR+TG+VLDSG   +  +P+++GY L   I++  LAG  ++    ++  E           A +E VR+        KEKL  V+             DF+  +   + S   E+         YE+P+G     G  ++R P  LF
Sbjct:    9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLF 306          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ACL6B_HUMAN (Actin-like protein 6B OS=Homo sapiens GN=ACTL6B PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.662e-32
Identity = 94/298 (31.54%), Postives = 151/298 (50.67%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS-----YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT---TTAEREIVRD-------IKEKLCYVA------------LDFEQEMATAASSSSLEK--------SYELPDGQVITIGKRKVRCPXSLF 852
            +EV ALV D GS   +AG+AG+D P+A FP+ VG       G +   G K+      ++   A    R    +  P+++G++ +W+    I  HT+   ++  P  HPVL++EAP N +A REK+T++MFE +N PA ++   AVL+ +A+GR+TG+VLDSG   +  +P+++GY L   I++  LAG  ++    ++  E           A +E VR+        KEKL  V+             DF+  +   + S   E+         YE+P+G     G  ++R P  LF
Sbjct:    9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLF 306          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ACL6A_MACFA (Actin-like protein 6A OS=Macaca fascicularis GN=ACTL6A PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.662e-32
Identity = 94/301 (31.23%), Postives = 150/301 (49.83%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG----RPRHQGVMVGMGQKDS------YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT---TTAEREIVRD-------IKEKLCYVA------------LDFEQEMATAASSSSLEK--------SYELPDGQVITIGKRKVRCPXSLF 852
            +EV ALV D GS   +AG+AG+D P+  FP+ +G    R     +M   G K        Y+   A +  R  +    P+++G+V +WD  + I  HT+   ++     HPVL++EAP N +A REK+T++MFE +N PA ++   AVL+ +A+GR+TG++LDSG   +  +P+++GY L   I++  LAG  +T    ++  E           A +E VR+        KEKL  V              DF+  +   + S+  E+         YE P+G     G  +++ P  LF
Sbjct:    9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGGPTYYIATNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLF 309          
The following BLAST results are available for this feature:
BLAST of EY659162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 488
Match NameE-valueIdentityDescription
ARP3_CHICK1.274e-4239.83Actin-related protein 3 OS=Gallus gallus GN=ACTR3 ... [more]
ARP3_ARATH1.274e-4237.80Actin-related protein 3 OS=Arabidopsis thaliana GN... [more]
ARP3_ORYSJ9.130e-4137.25Actin-related protein 3 OS=Oryza sativa subsp. jap... [more]
ARP3_ORYSI9.130e-4137.25Actin-related protein 3 OS=Oryza sativa subsp. ind... [more]
ACTL8_HUMAN2.408e-3333.97Actin-like protein 8 OS=Homo sapiens GN=ACTL8 PE=2... [more]
ACL6B_RAT1.561e-3231.54Actin-like protein 6B OS=Rattus norvegicus GN=Actl... [more]
ACL6B_MOUSE1.561e-3231.54Actin-like protein 6B OS=Mus musculus GN=Actl6b PE... [more]
ACL6B_BOVIN1.561e-3231.54Actin-like protein 6B OS=Bos taurus GN=ACTL6B PE=2... [more]
ACL6B_HUMAN2.662e-3231.54Actin-like protein 6B OS=Homo sapiens GN=ACTL6B PE... [more]
ACL6A_MACFA2.662e-3231.23Actin-like protein 6A OS=Macaca fascicularis GN=AC... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-A11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659162 ID=EY659162; Name=EY659162; organism=Citrus sinensis; type=EST; length=904bp
CTCAAGTGACGTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAAGAAGTAGCAGCACTCGTTGTCGACA
ATGGATCCGGTATGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCAGA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAAGGCATCAGGGTGTCATGGT
TGGTATGGGACAAAAAGACAGTTATGTTGGAGATGAAGCTCAATCTAAGA
GAGGTATCCTTACCTTGAAATACCCCATCGAACACGGTATTGTCACAAAC
TGGGACGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAACTCCG
AGTAGCGCCAGAAGAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTAACAGAGAAAAGATGACCCAAATCATGTTTGAAACCTTCAAC
ACACCCGCCATGTATGTAGCTATCCAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCGTACCACTGGTATCGTTCTTGATTCAGGAGATGGTGTTTCCCACA
CAGTGCCAATCTATGAAGGTTATGCCTTACCTCATGCTATCCTCCGTTTG
GACTTGGCTGGTCGTGACTTGACCGACTACCTCATGAAGATCCTTACAGA
AAGAGGTTACAGTTTCACAACCACAGCTGAAAGAGAAATCGTNCGTGATA
TCAAAGAAAAATTATGTTATGTAGCTTTAGACTTTGAACAAGAAATGGCC
ACCGCTGCTTCCTCAAGCTCCCTAGAAAAATCCTATGAATTGCCTGATGG
TCAAGTAATCACAATTGGAAAACGAAAGGTCCGTTGCCCANAAAGCCTAT
TCAGCCATCATTCTTGGTATGGAAGCTGNGGTATNCATGAACTACTTACA
CTCA
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