EY659162

Overview
NameEY659162
Unique NameEY659162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ACL6A_HUMAN (Actin-like protein 6A OS=Homo sapiens GN=ACTL6A PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.477e-32
Identity = 93/301 (30.90%), Postives = 149/301 (49.50%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG----RPRHQGVMVGMGQKDSYVG-------DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT---TTAEREIVRD-------IKEKLCYVA------------LDFEQEMATAASSSSLEK--------SYELPDGQVITIGKRKVRCPXSLF 852
            +EV ALV D GS   +AG+AG+D P+  FP+ +G    R     +M   G K    G       +  +  R  +    P+++G+V +WD  + I  HT+   ++     HPVL++EAP N +A REK+T++MFE +N PA ++   AVL+ +A+GR+TG++LDSG   +  +P+++GY L   I++  LAG  +T    ++  E           A +E VR+        KEKL  V              DF+  +   + S+  E+         YE P+G     G  +++ P  LF
Sbjct:    9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLF 309          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ACL6A_MOUSE (Actin-like protein 6A OS=Mus musculus GN=Actl6a PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.726e-31
Identity = 92/301 (30.56%), Postives = 149/301 (49.50%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG----RPRHQGVMVGMGQKDSYVG-------DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT---TTAEREIVRD-------IKEKLCYVA------------LDFEQEMATAASSSSLEK--------SYELPDGQVITIGKRKVRCPXSLF 852
            +EV ALV D GS   +AG+AG+D P+  FP+ +G    R     +M   G K    G       +  +  R  +    P+++G+V +WD  + I  HT+   ++     HPVL++EAP N +A REK+T++MFE ++ PA ++   AVL+ +A+GR+TG++LDSG   +  +P+++GY L   I++  LAG  +T    ++  E           A +E VR+        KEKL  V              DF+  +   + S+  E+         YE P+G     G  +++ P  LF
Sbjct:    9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELIPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLF 309          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ARP6_ARATH (Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.461e-30
Identity = 84/255 (32.94%), Postives = 136/255 (53.33%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS-YELPDGQVITIG 819
            +V+DNG G+ KAG  G+  P  V P+ + +P      +      + + DE         ++ PI+ G + N D   +IW H F + L +AP    +LLTEAPL+  + +    +++FE F   ++Y+A  Q+++ LY + R            +V+D G   +H VP+   + L HAI R+DL G+  T+YL ++++ R  S     E  +V D KEKLC+V+LD  +++  A + ++L KS Y LPDG   T G
Sbjct:    5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AVRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKG 254          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: CT134_MOUSE (Putative uncharacterized actin family protein C20orf134 homolog OS=Mus musculus PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.755e-29
Identity = 64/195 (32.82%), Postives = 110/195 (56.41%), Query Frame = 1
Query:  271 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA-EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGKRKVRCPXSLF 852
            +PI+HG+V +WD +E +W       L+V PE+ PVL++++P  P   REK+ +++FE    PA ++A  A+L+L + G  +G+ +++G GV H  PIY G++   A  RL++AG  L+ Y   +L             R+ V  +K++ CYV+LDF+ ++   A        + L +G  + +G  + RCP  +F
Sbjct:   37 HPIKHGVVVDWDALEGLWERLMVGGLQVHPEQWPVLVSDSPSAPPKGREKVAELLFEALTVPACHMANTALLALCSIGAFSGLAVEAGAGVCHATPIYAGHSWHKATFRLNVAGSTLSRYFRDLLVAACPDLQLQGLSRKTVTQLKKRCCYVSLDFQGDICDPARHQ--RACFCLGNGCYVRLGSERFRCPEPIF 229          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSJ (Actin-related protein 6 OS=Oryza sativa subsp. japonica GN=ARP6 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.047e-28
Identity = 81/252 (32.14%), Postives = 131/252 (51.98%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI---LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA-IQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSS---LEKSYELPDG 801
            +V+DNG G+ KAGF GD  P AV P+ + +P         G K   V D+ Q++      +TL+ PI+ G + N +   ++W     N L+V P    +LL E   NP A +    +++FE     ++ VA   +++ LY + R          +V+D G   +H  P+ + + L +A+ R+DL G+ LT+YL ++++ R  S     E  ++ D KEKLC+V+LD   ++  A  SS+      SY LPDG
Sbjct:    8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDG 249          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSI (Actin-related protein 6 OS=Oryza sativa subsp. indica GN=ARP6 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.047e-28
Identity = 81/252 (32.14%), Postives = 131/252 (51.98%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI---LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA-IQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSS---LEKSYELPDG 801
            +V+DNG G+ KAGF GD  P AV P+ + +P         G K   V D+ Q++      +TL+ PI+ G + N +   ++W     N L+V P    +LL E   NP A +    +++FE     ++ VA   +++ LY + R          +V+D G   +H  P+ + + L +A+ R+DL G+ LT+YL ++++ R  S     E  ++ D KEKLC+V+LD   ++  A  SS+      SY LPDG
Sbjct:    8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDG 249          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSJ (Actin-related protein 7 OS=Oryza sativa subsp. japonica GN=ARP7 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 89/258 (34.50%), Postives = 126/258 (48.84%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGKRKVRCPXSLF 852
            A+VVD GS + KAG A  D +P  V PS           + +  +D  +GD A  +  +     P+  G V +WD ME + ++  Y+ +     +E  +L TE    PKA RE++ Q+MFE FN    Y + QAVLSLYA GR +G  +D G G     P+ EG     A  R D+ G DLT+   + L +   S     +   V  +KE+  Y     +Q    A  SS   + + LPDGQVITI K +     +LF
Sbjct:    3 AVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTNLFAEELKKSNSS--VNIDISDVERLKEQ--YACCAEDQMAFEAIGSSCRPERHTLPDGQVITIEKERYIVGEALF 242          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSI (Actin-related protein 7 OS=Oryza sativa subsp. indica GN=ARP7 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 89/258 (34.50%), Postives = 126/258 (48.84%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGKRKVRCPXSLF 852
            A+VVD GS + KAG A  D +P  V PS           + +  +D  +GD A  +  +     P+  G V +WD ME + ++  Y+ +     +E  +L TE    PKA RE++ Q+MFE FN    Y + QAVLSLYA GR +G  +D G G     P+ EG     A  R D+ G DLT+   + L +   S     +   V  +KE+  Y     +Q    A  SS   + + LPDGQVITI K +     +LF
Sbjct:    3 AVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTNLFAEELKKSNSS--VNIDISDVERLKEQ--YACCAEDQMAFEAIGSSCRPERHTLPDGQVITIEKERYIVGEALF 242          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ARP7_ARATH (Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.851e-26
Identity = 91/258 (35.27%), Postives = 127/258 (49.22%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGKRKVRCPXSLF 852
            ALVVD GS   KAG A  D +P  + PS + R      MV  G   +   D   +    +TL  PIE G++ +WD ME +  +  Y  L      E  +L T+    PKA RE++ Q+MFETFN    Y + QAVLSLYA GR +G  +D G G     P+ EG     A  R +L G +LT    + L +   S   +     V  +KE+    A   E E+A   + +   + + LPDGQVI+IG+ +     +LF
Sbjct:    3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDVTLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTKLFAQELGKTNPSMNLSMSD--VEKLKEQYANCA---EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALF 245          
BLAST of EY659162 vs. ExPASy Swiss-Prot
Match: ARP4_YARLI (Actin-related protein 4 OS=Yarrowia lipolytica GN=ARP4 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.724e-26
Identity = 81/299 (27.09%), Postives = 131/299 (43.81%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY-------VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG--------------------------------YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGKRKVRCPXSLF 852
            +EVA LV+D GS   + G+AG+D P+ V  +  G    + V +     ++        VGD A      + + +P+  GIV +WD ++ IW ++    L    + HP++LTE   N +AN+ K  +I FE+   PA Y+   AV S +A+G+   +VLD G  V+   P+ +G  L     R   AG  L   + K+L  RG                                +SFT      I+ + K+ +C V    +  +    S  + ++ +E P G   T G  ++    SLF
Sbjct:   14 DEVATLVIDTGSSYTRVGYAGEDTPKLVVSTECGLMADEDVEMEDDTSNTTKKLNKYKVGDSANLPLPNMEVLHPLTDGIVADWDAVQNIWEYSLAR-LNADTKTHPLMLTEPCWNTQANKLKALEIAFESLEVPASYLVKDAVASAFAAGKGNALVLDVGSEVASVTPVIDGLVLYKPARRSQYAGDYLDRQIKKVLVSRGIDLTPRFEIKNKKAVEMGEPPVFTKRELPNVTHSFTDLQVSRILSEFKDSMCQVN---DVPLTPEISGEAADRVFEFPTGYSTTFGADRLSTSESLF 308          
The following BLAST results are available for this feature:
BLAST of EY659162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 488
Match NameE-valueIdentityDescription
ACL6A_HUMAN3.477e-3230.90Actin-like protein 6A OS=Homo sapiens GN=ACTL6A PE... [more]
ACL6A_MOUSE1.726e-3130.56Actin-like protein 6A OS=Mus musculus GN=Actl6a PE... [more]
ARP6_ARATH1.461e-3032.94Actin-related protein 6 OS=Arabidopsis thaliana GN... [more]
CT134_MOUSE2.755e-2932.82Putative uncharacterized actin family protein C20o... [more]
ARP6_ORYSJ1.047e-2832.14Actin-related protein 6 OS=Oryza sativa subsp. jap... [more]
ARP6_ORYSI1.047e-2832.14Actin-related protein 6 OS=Oryza sativa subsp. ind... [more]
ARP7_ORYSJ1.280e-2634.50Actin-related protein 7 OS=Oryza sativa subsp. jap... [more]
ARP7_ORYSI1.280e-2634.50Actin-related protein 7 OS=Oryza sativa subsp. ind... [more]
ARP7_ARATH2.851e-2635.27Actin-related protein 7 OS=Arabidopsis thaliana GN... [more]
ARP4_YARLI3.724e-2627.09Actin-related protein 4 OS=Yarrowia lipolytica GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-A11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659162 ID=EY659162; Name=EY659162; organism=Citrus sinensis; type=EST; length=904bp
CTCAAGTGACGTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAAGAAGTAGCAGCACTCGTTGTCGACA
ATGGATCCGGTATGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCAGA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAAGGCATCAGGGTGTCATGGT
TGGTATGGGACAAAAAGACAGTTATGTTGGAGATGAAGCTCAATCTAAGA
GAGGTATCCTTACCTTGAAATACCCCATCGAACACGGTATTGTCACAAAC
TGGGACGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAACTCCG
AGTAGCGCCAGAAGAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTAACAGAGAAAAGATGACCCAAATCATGTTTGAAACCTTCAAC
ACACCCGCCATGTATGTAGCTATCCAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCGTACCACTGGTATCGTTCTTGATTCAGGAGATGGTGTTTCCCACA
CAGTGCCAATCTATGAAGGTTATGCCTTACCTCATGCTATCCTCCGTTTG
GACTTGGCTGGTCGTGACTTGACCGACTACCTCATGAAGATCCTTACAGA
AAGAGGTTACAGTTTCACAACCACAGCTGAAAGAGAAATCGTNCGTGATA
TCAAAGAAAAATTATGTTATGTAGCTTTAGACTTTGAACAAGAAATGGCC
ACCGCTGCTTCCTCAAGCTCCCTAGAAAAATCCTATGAATTGCCTGATGG
TCAAGTAATCACAATTGGAAAACGAAAGGTCCGTTGCCCANAAAGCCTAT
TCAGCCATCATTCTTGGTATGGAAGCTGNGGTATNCATGAACTACTTACA
CTCA
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