EY659144

Overview
NameEY659144
Unique NameEY659144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_MONBE (40S ribosomal protein S3a OS=Monosiga brevicollis GN=34920 PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.475e-64
Identity = 118/207 (57.00%), Postives = 160/207 (77.29%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGD 747
            +WYD+KAPS F+ R VGKT V RT GTK++++GL+ RV+E+SL DL N++E  +RK++L+ E++QG   LTNF GMS TTDKLRSLV+KW +LIEA+VDVKT D + LR+F IGFTK+  N  ++TCYAQ++Q R +R KM EIM  + A+CDLK  V K +   IG+EI+K   SI+PLQ+V+IRKVK+LK P FD+ KL+ +HG+
Sbjct:   28 EWYDVKAPSYFKKRQVGKTPVNRTAGTKLSADGLRGRVYEMSLADL-NDDESTFRKVKLQVEEIQGTECLTNFHGMSLTTDKLRSLVKKWRSLIEAFVDVKTNDGYVLRIFSIGFTKKQANSDRKTCYAQSAQKRALRAKMVEIM-QREATCDLKEFVSKLMPGTIGQEIQKKCQSIFPLQDVYIRKVKVLKKPRFDVSKLLELHGE 232          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMO (40S ribosomal protein S3a OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.634e-64
Identity = 123/209 (58.85%), Postives = 154/209 (73.68%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGD 747
            DWYD+KAPS F  R VG TLV RTQGTKIASEGLK RVFEVSL DL    + E ++RK RL AE VQG+NVL NF GM  TTDKLR +V+KW TLIEA +DVKTTD + LR+FCIGFT +     ++TCYAQ +Q+R IR+KM EI+     + +L+ +V K I + I ++IEKA   IYPL++V IRKVK+LK P F++ KLM +HG+
Sbjct:   29 DWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 237          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAST (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae GN=RPS1A PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 7.634e-64
Identity = 121/209 (57.89%), Postives = 153/209 (73.21%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +     L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK P FD+  LM +HG+ S
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGS 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS7 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1A PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.634e-64
Identity = 121/209 (57.89%), Postives = 153/209 (73.21%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +     L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK P FD+  LM +HG+ S
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGS 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS6 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain AWRI1631) GN=RPS1A PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.634e-64
Identity = 121/209 (57.89%), Postives = 153/209 (73.21%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +     L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK P FD+  LM +HG+ S
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGS 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS2 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain JAY291) GN=RPS1A PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.634e-64
Identity = 121/209 (57.89%), Postives = 153/209 (73.21%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +     L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK P FD+  LM +HG+ S
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGS 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS1 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS1A PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.634e-64
Identity = 121/209 (57.89%), Postives = 153/209 (73.21%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +     L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK P FD+  LM +HG+ S
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGS 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAST (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae GN=RPS1B PE=1 SV=3)

HSP 1 Score: 243.817 bits (621), Expect = 9.970e-64
Identity = 120/209 (57.42%), Postives = 154/209 (73.68%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +  +  L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK P FD+  LM +HG+ S
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGS 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS7 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1B PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.970e-64
Identity = 120/209 (57.42%), Postives = 154/209 (73.68%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +  +  L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK P FD+  LM +HG+ S
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGS 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS6 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain AWRI1631) GN=RPS1B PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.970e-64
Identity = 120/209 (57.42%), Postives = 154/209 (73.68%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +  +  L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK P FD+  LM +HG+ S
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGS 236          
The following BLAST results are available for this feature:
BLAST of EY659144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
RS3A_MONBE4.475e-6457.0040S ribosomal protein S3a OS=Monosiga brevicollis ... [more]
RS3A_BOMMO7.634e-6458.8540S ribosomal protein S3a OS=Bombyx mori PE=2 SV=1[more]
RS3A1_YEAST7.634e-6457.8940S ribosomal protein S1-A OS=Saccharomyces cerevi... [more]
RS3A1_YEAS77.634e-6457.8940S ribosomal protein S1-A OS=Saccharomyces cerevi... [more]
RS3A1_YEAS67.634e-6457.8940S ribosomal protein S1-A OS=Saccharomyces cerevi... [more]
RS3A1_YEAS27.634e-6457.8940S ribosomal protein S1-A OS=Saccharomyces cerevi... [more]
RS3A1_YEAS17.634e-6457.8940S ribosomal protein S1-A OS=Saccharomyces cerevi... [more]
RS3A2_YEAST9.970e-6457.4240S ribosomal protein S1-B OS=Saccharomyces cerevi... [more]
RS3A2_YEAS79.970e-6457.4240S ribosomal protein S1-B OS=Saccharomyces cerevi... [more]
RS3A2_YEAS69.970e-6457.4240S ribosomal protein S1-B OS=Saccharomyces cerevi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659144 ID=EY659144; Name=EY659144; organism=Citrus sinensis; type=EST; length=902bp
CCACGCGTCCGGCGGAGCCGTCTCTTGAGCAGCAGCTGCACAAACATGGC
CGTCGGGAAGAACAAGAGGATTTCAAAGGGGAAGAAAGGAGGCAAGAAGA
AGGCTGCTGATCCGTTTGCCAAGAAGGACTGGTATGATATCAAGGCTCCA
TCTTGTTTCCGCGTCAGAAATGTTGGCAAGACTCTTGTTACCCGGACTCA
GGGTACCAAGATTGCATCAGAAGGACTCAAACACAGAGTGTTTGAGGTAT
CACTAGGTGATCTTCTCAACGAAGAAGAGCACGCTTACAGGAAGATCAGA
CTGAGAGCTGAAGATGTCCAAGGGAAGAATGTGTTGACTAACTTCTGGGG
CATGAGTTTCACTACAGACAAGCTGAGGTCTTTGGTTAGGAAGTGGCATA
CCTTGATTGAAGCTTATGTGGATGTCAAGACCACTGATAACTTCACATTG
AGATTGTTCTGCATTGGATTCACCAAGAGACTTCCAAACCAGGTTAAGAG
GACTTGCTATGCACAGACCAGCCAGATTAGACAGATTCGCCGCAAGATGA
GGGAGATCATGGTTGCTCAGGCAGCATCTTGTGATCTTAAGAGCTTGGTC
GAAAAGTTCATTGCTGAAGTGATTGGAAGAGAGATTGAGAAGGCAACCTC
AAGCATATATCCCTTACAAAATGTGTTCATTCGCAAAGTGAAGATCCTGA
AAGCTCCCNAGTTTGATCTTGAAAAATTGATGGANGTTCACGGTGATTAC
TCGGAAANATGTNGTGTGAAGGTGGATAGGCCAGCTGATGAGCCATACCT
GAAGCACCACTGAGTGATTGGAGCTTGACGTGATGAAGAATTTTCTAGNT
TGTTTTCCACACATCTGATCTGGCAGTTTGTTGTTATGACCATCAACATG
AA
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