EY659144

Overview
NameEY659144
Unique NameEY659144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A1_TRYCR (40S ribosomal protein S3a-1 OS=Trypanosoma cruzi GN=Tc00.1047053503635.59 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.553e-43
Identity = 83/209 (39.71%), Postives = 134/209 (64.11%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGD 747
            +WYD+ AP  F VR  GKT+  +TQGTKIA++ L+ RV+E +L DL     ++ AYRK++   ++VQG+N+LT F  M  T+D++  L+RKW T IEA V+ KT D +TLRLF I FTK+  NQ+ + CYA+T  ++ +R ++  ++  + +  ++   V      ++   + K  + I PL+++ IRKVK+++ P FD + L+  HG+
Sbjct:   28 EWYDVVAPKNFEVRQFGKTICNKTQGTKIAADYLRGRVYESNLADLNKTQGDDDAYRKVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKWCTTIEAAVETKTADGYTLRLFVIAFTKKQSNQLSKNCYAKTRLVKWVRHRITNLIRQRLSKVNINEAVTLLTRNILRDRLAKRCNPIVPLRDLRIRKVKVVRTPRFDAQALLNAHGE 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_LEIBR (40S ribosomal protein S3a OS=Leishmania braziliensis GN=LbrM34_V2.0430 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.355e-43
Identity = 84/208 (40.38%), Postives = 130/208 (62.50%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHG 744
            +WYD+ APS F  R   KT+  +TQGT+IA++ L+ RVFE +L DL     EE AYRK+R   ++VQG+N+LT F  M  TTDK+ SL+RKW T +E  V+V+T D +T+RLF + FTK   NQ  R CYA+   ++ +R ++ +++  + +   +K  V      V+   + +  + I PL+ + IRKV++++ P FD + L+  HG
Sbjct:   29 EWYDVVAPSNFEKRQFSKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEMTTDKMASLLRKWCTTMETTVEVRTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRVTKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPIVPLREMRIRKVRVVRTPKFDAQALLNAHG 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_LEIMA (40S ribosomal protein S3a OS=Leishmania major GN=LmjF35.0400 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.687e-43
Identity = 84/208 (40.38%), Postives = 130/208 (62.50%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHG 744
            +WYD+ AP+ F  R   KT+  +TQGT+IA++ L+ RVFE +L DL     EE AYRK+R   ++VQG+N+LT F  M  TTDK+ SL+RKW T +E  V+VKT D +T+RLF + FTK   NQ  R CYA+   ++ +R ++ +++  + +   +K  V      V+   + +  + I PL+ + IRKV++++ P FD + L+  HG
Sbjct:   29 EWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHG 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A2_LEIIN (40S ribosomal protein S3a-2 OS=Leishmania infantum GN=LinJ35.0510 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.687e-43
Identity = 84/208 (40.38%), Postives = 130/208 (62.50%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHG 744
            +WYD+ AP+ F  R   KT+  +TQGT+IA++ L+ RVFE +L DL     EE AYRK+R   ++VQG+N+LT F  M  TTDK+ SL+RKW T +E  V+VKT D +T+RLF + FTK   NQ  R CYA+   ++ +R ++ +++  + +   +K  V      V+   + +  + I PL+ + IRKV++++ P FD + L+  HG
Sbjct:   29 EWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHG 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A1_LEIIN (40S ribosomal protein S3a-1 OS=Leishmania infantum GN=LinJ35.0500 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.687e-43
Identity = 84/208 (40.38%), Postives = 130/208 (62.50%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHG 744
            +WYD+ AP+ F  R   KT+  +TQGT+IA++ L+ RVFE +L DL     EE AYRK+R   ++VQG+N+LT F  M  TTDK+ SL+RKW T +E  V+VKT D +T+RLF + FTK   NQ  R CYA+   ++ +R ++ +++  + +   +K  V      V+   + +  + I PL+ + IRKV++++ P FD + L+  HG
Sbjct:   29 EWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHG 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_NOSCE (40S ribosomal protein S1 OS=Nosema ceranae (strain BRL01) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.395e-33
Identity = 77/193 (39.90%), Postives = 118/193 (61.14%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL-NEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILK 702
            +WY++KAP+ F     GKT+VT++   +  +  L  R F+++  DL  N EEHA RK   R  +V+GK+ +  F GM  T+DK++ ++RKWHTLIEA  D+   D   LR+F    TK+ P    +  Y +TS+ ++IR+ M +++  +    DL  +++K  AEVIG+ +EK  S IYPLQN  + KVK +K
Sbjct:   30 EWYNLKAPAIFPNNVCGKTMVTKSSNKQNLALLLIGRKFDINQADLTGNLEEHA-RKFSFRVNEVRGKDCIGVFDGMHMTSDKVKGIIRKWHTLIEAEKDIVAKDGTILRVFVNAVTKKTPTCTSKRVYCKTSEEKKIRKVMFDVIEEELKGEDLNKIMKKLAAEVIGKSVEKKGSLIYPLQNCCVIKVKTVK 221          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_GIALA (40S ribosomal protein S3a OS=Giardia lamblia GN=GL50803_16265 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.041e-28
Identity = 71/207 (34.30%), Postives = 116/207 (56.04%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLN--EEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVH 741
            +WY + AP+ F+ R++G+T VT+T G ++A++ + HRV+EV+LGDL    E+ +   K  L+ + V     LTNF GM  T  K  SL RK    I+ ++D+ TTD + LR+F I FT R   Q ++ C+ +   IR +R  + E +  +     +  LV K     +  ++ +A   I   ++V IR+VK++K P   +E L  +H
Sbjct:   26 EWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPRNTMELLSTMH 232          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_ENCCU (40S ribosomal protein S1 OS=Encephalitozoon cuniculi GN=RPS1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.957e-28
Identity = 57/157 (36.31%), Postives = 98/157 (62.42%), Query Frame = 1
Query:  235 RVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKA 705
            R ++V+  DL    +  +RK   +  D++G   +  F GM  T+DK +++++KWHTLIEA  D+   D    R+F +G T+R P  VK+TCY + S  ++IR+ M +++  + + CD++ +++K   E +G+ IE+  S I+PLQN  +RKVK +K+
Sbjct:   16 RRYDVNQADLTGNNDVGHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIKS 172          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_GUITH (40S ribosomal protein S3a OS=Guillardia theta PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.714e-27
Identity = 60/188 (31.91%), Postives = 109/188 (57.98%), Query Frame = 1
Query:  139 IKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILK 702
            + AP  F  + +GKTL+ +       +  + +++++VSL D+L +EE +      ++  +      T F G++ T DK+ SL++KWHTLIE  V+ KT D + L+LF I  +K+  N   +T Y  +SQ R +RR++ +I++ +  + D+K  + +  +  I  +IE   S I+P+  V IRK+K+++
Sbjct:   29 VYAPDIFDSKLIGKTLIKKRNPAD-ENSSVDNKIYQVSLADILGKEEFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_METTP (30S ribosomal protein S3Ae OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps3Ae PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.534e-22
Identity = 66/193 (34.20%), Postives = 102/193 (52.85%), Query Frame = 1
Query:  130 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 708
            WY + AP  F    VG+TL             L  RV E +LGDL N       K+R + + V G    T F G   TTD +RSLV++  + I+A VDV T+D + +R+    FT      VKR   A+ +Q++ IR   R++++++A + DL  L+++ +   +  +I K   ++YPL+ V IRK +IL  P
Sbjct:   17 WYKVLAPEMFGRTPVGETLANDPNK-------LLGRVIETTLGDLTNNFSKQNTKLRFKIDAVAGDTAYTKFIGHEMTTDYIRSLVKRRTSRIDAVVDVTTSDGYLVRVKPSCFT------VKR---ARANQVKAIREISRQVIISRAGNIDLNGLIQEVVLGKLSLDIYKDAKAVYPLRRVEIRKTEILAGP 193          
The following BLAST results are available for this feature:
BLAST of EY659144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
RS3A1_TRYCR2.553e-4339.7140S ribosomal protein S3a-1 OS=Trypanosoma cruzi G... [more]
RS3A_LEIBR4.355e-4340.3840S ribosomal protein S3a OS=Leishmania braziliens... [more]
RS3A_LEIMA5.687e-4340.3840S ribosomal protein S3a OS=Leishmania major GN=L... [more]
RS3A2_LEIIN5.687e-4340.3840S ribosomal protein S3a-2 OS=Leishmania infantum... [more]
RS3A1_LEIIN5.687e-4340.3840S ribosomal protein S3a-1 OS=Leishmania infantum... [more]
RS3A_NOSCE2.395e-3339.9040S ribosomal protein S1 OS=Nosema ceranae (strain... [more]
RS3A_GIALA1.041e-2834.3040S ribosomal protein S3a OS=Giardia lamblia GN=GL... [more]
RS3A_ENCCU3.957e-2836.3140S ribosomal protein S1 OS=Encephalitozoon cunicu... [more]
RS3A_GUITH5.714e-2731.9140S ribosomal protein S3a OS=Guillardia theta PE=3... [more]
RS3A_METTP5.534e-2234.2030S ribosomal protein S3Ae OS=Methanosaeta thermop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659144 ID=EY659144; Name=EY659144; organism=Citrus sinensis; type=EST; length=902bp
CCACGCGTCCGGCGGAGCCGTCTCTTGAGCAGCAGCTGCACAAACATGGC
CGTCGGGAAGAACAAGAGGATTTCAAAGGGGAAGAAAGGAGGCAAGAAGA
AGGCTGCTGATCCGTTTGCCAAGAAGGACTGGTATGATATCAAGGCTCCA
TCTTGTTTCCGCGTCAGAAATGTTGGCAAGACTCTTGTTACCCGGACTCA
GGGTACCAAGATTGCATCAGAAGGACTCAAACACAGAGTGTTTGAGGTAT
CACTAGGTGATCTTCTCAACGAAGAAGAGCACGCTTACAGGAAGATCAGA
CTGAGAGCTGAAGATGTCCAAGGGAAGAATGTGTTGACTAACTTCTGGGG
CATGAGTTTCACTACAGACAAGCTGAGGTCTTTGGTTAGGAAGTGGCATA
CCTTGATTGAAGCTTATGTGGATGTCAAGACCACTGATAACTTCACATTG
AGATTGTTCTGCATTGGATTCACCAAGAGACTTCCAAACCAGGTTAAGAG
GACTTGCTATGCACAGACCAGCCAGATTAGACAGATTCGCCGCAAGATGA
GGGAGATCATGGTTGCTCAGGCAGCATCTTGTGATCTTAAGAGCTTGGTC
GAAAAGTTCATTGCTGAAGTGATTGGAAGAGAGATTGAGAAGGCAACCTC
AAGCATATATCCCTTACAAAATGTGTTCATTCGCAAAGTGAAGATCCTGA
AAGCTCCCNAGTTTGATCTTGAAAAATTGATGGANGTTCACGGTGATTAC
TCGGAAANATGTNGTGTGAAGGTGGATAGGCCAGCTGATGAGCCATACCT
GAAGCACCACTGAGTGATTGGAGCTTGACGTGATGAAGAATTTTCTAGNT
TGTTTTCCACACATCTGATCTGGCAGTTTGTTGTTATGACCATCAACATG
AA
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