EY659144

Overview
NameEY659144
Unique NameEY659144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_METB6 (30S ribosomal protein S3Ae OS=Methanoregula boonei (strain 6A8) GN=rps3Ae PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.247e-14
Identity = 57/190 (30.00%), Postives = 96/190 (50.53%), Query Frame = 1
Query:  142 KAPSCFRVR---NVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLF--CIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 696
            KA S F+V    N+GK  +  T  +++  E +K R+ + +LG++ N+    + K+  +  +V G    T F G   T D LRSLV++  + I+ +V V T DN  +RL   C  F +           A  +Q   +R  +   +VAQA + DL +LV   ++  I +++ K   ++YP + V I K K+
Sbjct:   15 KAKSWFKVYTPDNLGKAYIGDTIASEV--ETVKGRIMQATLGEITNDYAKQHIKMSFKIAEVTGDAAYTEFVGHEVTRDYLRSLVKRRSSRIDCHVQVVTKDNKKVRLTISCYTFAR-----------ANIAQEHALRNAITAGLVAQAQAWDLNTLVNGVVSGEISKDLFKLVKTLYPTRRVEIIKSKV 191          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_HALMA (30S ribosomal protein S3Ae OS=Haloarcula marismortui GN=rps3Ae PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.614e-13
Identity = 53/193 (27.46%), Postives = 87/193 (45.08%), Query Frame = 1
Query:  130 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 708
            WY ++AP  F    +GKT            + +  R  E +LG+L N+      K+  +  +V   +  T F     T D LRSLVR+  + +EAY+ V TTD++ +++  +  T         T  A  SQ + IRR M +++   A     + L++  +   +   I      IYPL+ V I+K  +   P
Sbjct:   15 WYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLTFKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT---------TKKADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKTTLEARP 191          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_SULAC (30S ribosomal protein S3Ae OS=Sulfolobus acidocaldarius GN=rps3ae PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 64/197 (32.49%), Postives = 93/197 (47.21%), Query Frame = 1
Query:  130 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE----HAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 708
            WY I AP  F     G+ L+  T    I ++ L  ++ EV+L DL  +      H Y KI     ++ G  + T F+G   + D +RSLVR+  + I A VDV T D + LR+  +  T         T  A  SQ   IR+ + +I   +A   D    V+  I   +  +I +    IYPL+ V I K K+LKAP
Sbjct:   18 WYVITAPKVF-----GEALLGSTPAYDI-NKALSRKI-EVTLYDLTGDYNLVYIHLYFKI---LGNISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGLVLT---------TYRAHISQKTAIRKVISDITRKKAEESDFDQFVQDVIFGKLSNDIFQEAKKIYPLRKVEIEKTKLLKAP 195          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_SULIY (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rps3Ae PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 55/196 (28.06%), Postives = 87/196 (44.39%), Query Frame = 1
Query:  130 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 708
            WY I AP  F   ++G T    VT+T G ++          E +L DL  +    Y  +  +    +G  ++T F G   + D LRSL+R+  + + +  DV T D         G+  R+   V  T     SQ   IR+ + E +  +A+        ++ +   +  EI +AT  IYPL+   I K K+LK P
Sbjct:   17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVP 193          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_SULIN (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps3Ae PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 55/196 (28.06%), Postives = 87/196 (44.39%), Query Frame = 1
Query:  130 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 708
            WY I AP  F   ++G T    VT+T G ++          E +L DL  +    Y  +  +    +G  ++T F G   + D LRSL+R+  + + +  DV T D         G+  R+   V  T     SQ   IR+ + E +  +A+        ++ +   +  EI +AT  IYPL+   I K K+LK P
Sbjct:   17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVP 193          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_SULIM (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rps3Ae PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 55/196 (28.06%), Postives = 87/196 (44.39%), Query Frame = 1
Query:  130 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 708
            WY I AP  F   ++G T    VT+T G ++          E +L DL  +    Y  +  +    +G  ++T F G   + D LRSL+R+  + + +  DV T D         G+  R+   V  T     SQ   IR+ + E +  +A+        ++ +   +  EI +AT  IYPL+   I K K+LK P
Sbjct:   17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVP 193          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_SULIL (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rps3Ae PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 55/196 (28.06%), Postives = 87/196 (44.39%), Query Frame = 1
Query:  130 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 708
            WY I AP  F   ++G T    VT+T G ++          E +L DL  +    Y  +  +    +G  ++T F G   + D LRSL+R+  + + +  DV T D         G+  R+   V  T     SQ   IR+ + E +  +A+        ++ +   +  EI +AT  IYPL+   I K K+LK P
Sbjct:   17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVP 193          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_SULIK (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rps3Ae PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 55/196 (28.06%), Postives = 87/196 (44.39%), Query Frame = 1
Query:  130 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 708
            WY I AP  F   ++G T    VT+T G ++          E +L DL  +    Y  +  +    +G  ++T F G   + D LRSL+R+  + + +  DV T D         G+  R+   V  T     SQ   IR+ + E +  +A+        ++ +   +  EI +AT  IYPL+   I K K+LK P
Sbjct:   17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVP 193          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_SULIA (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain M.16.27) GN=rps3Ae PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 55/196 (28.06%), Postives = 87/196 (44.39%), Query Frame = 1
Query:  130 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 708
            WY I AP  F   ++G T    VT+T G ++          E +L DL  +    Y  +  +    +G  ++T F G   + D LRSL+R+  + + +  DV T D         G+  R+   V  T     SQ   IR+ + E +  +A+        ++ +   +  EI +AT  IYPL+   I K K+LK P
Sbjct:   17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVP 193          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_PYRAR (30S ribosomal protein S3Ae OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps3Ae PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 51/193 (26.42%), Postives = 91/193 (47.15%), Query Frame = 1
Query:  130 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 708
            W+ + AP       +G   +     T+  +E L  R  EVSL D+  +  H   K++ +   V+G   LT F G+  + D ++SLVRK  + + A  +VKT D   +R+  +  T              T+Q   +R+K+ E ++ +A+  D    +++ +   +  ++  A   I PL+ V   K+K+LK P
Sbjct:   27 WFAVHAPPY-----LGGVFLAEVPATE--AEKLLMRTLEVSLYDITKDISHLPVKLKFQIHRVEGLRALTRFKGLELSRDYVKSLVRKGTSKVVAITEVKTKDGMDMRVSVMVITAH---------RLGTAQKSAVRKKITETLLKKASEMDTSQFLKEVLEGTLAADLFIAAKKIAPLRKVEFAKIKVLKYP 203          
The following BLAST results are available for this feature:
BLAST of EY659144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
RS3A_METB64.247e-1430.0030S ribosomal protein S3Ae OS=Methanoregula boonei... [more]
RS3A_HALMA1.614e-1327.4630S ribosomal protein S3Ae OS=Haloarcula marismort... [more]
RS3A_SULAC2.108e-1332.4930S ribosomal protein S3Ae OS=Sulfolobus acidocald... [more]
RS3A_SULIY2.753e-1328.0630S ribosomal protein S3Ae OS=Sulfolobus islandicu... [more]
RS3A_SULIN2.753e-1328.0630S ribosomal protein S3Ae OS=Sulfolobus islandicu... [more]
RS3A_SULIM2.753e-1328.0630S ribosomal protein S3Ae OS=Sulfolobus islandicu... [more]
RS3A_SULIL2.753e-1328.0630S ribosomal protein S3Ae OS=Sulfolobus islandicu... [more]
RS3A_SULIK2.753e-1328.0630S ribosomal protein S3Ae OS=Sulfolobus islandicu... [more]
RS3A_SULIA2.753e-1328.0630S ribosomal protein S3Ae OS=Sulfolobus islandicu... [more]
RS3A_PYRAR2.753e-1326.4230S ribosomal protein S3Ae OS=Pyrobaculum arsenati... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659144 ID=EY659144; Name=EY659144; organism=Citrus sinensis; type=EST; length=902bp
CCACGCGTCCGGCGGAGCCGTCTCTTGAGCAGCAGCTGCACAAACATGGC
CGTCGGGAAGAACAAGAGGATTTCAAAGGGGAAGAAAGGAGGCAAGAAGA
AGGCTGCTGATCCGTTTGCCAAGAAGGACTGGTATGATATCAAGGCTCCA
TCTTGTTTCCGCGTCAGAAATGTTGGCAAGACTCTTGTTACCCGGACTCA
GGGTACCAAGATTGCATCAGAAGGACTCAAACACAGAGTGTTTGAGGTAT
CACTAGGTGATCTTCTCAACGAAGAAGAGCACGCTTACAGGAAGATCAGA
CTGAGAGCTGAAGATGTCCAAGGGAAGAATGTGTTGACTAACTTCTGGGG
CATGAGTTTCACTACAGACAAGCTGAGGTCTTTGGTTAGGAAGTGGCATA
CCTTGATTGAAGCTTATGTGGATGTCAAGACCACTGATAACTTCACATTG
AGATTGTTCTGCATTGGATTCACCAAGAGACTTCCAAACCAGGTTAAGAG
GACTTGCTATGCACAGACCAGCCAGATTAGACAGATTCGCCGCAAGATGA
GGGAGATCATGGTTGCTCAGGCAGCATCTTGTGATCTTAAGAGCTTGGTC
GAAAAGTTCATTGCTGAAGTGATTGGAAGAGAGATTGAGAAGGCAACCTC
AAGCATATATCCCTTACAAAATGTGTTCATTCGCAAAGTGAAGATCCTGA
AAGCTCCCNAGTTTGATCTTGAAAAATTGATGGANGTTCACGGTGATTAC
TCGGAAANATGTNGTGTGAAGGTGGATAGGCCAGCTGATGAGCCATACCT
GAAGCACCACTGAGTGATTGGAGCTTGACGTGATGAAGAATTTTCTAGNT
TGTTTTCCACACATCTGATCTGGCAGTTTGTTGTTATGACCATCAACATG
AA
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