EY659140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_PROM0 (50S ribosomal protein L28 OS=Prochlorococcus marinus (strain MIT 9301) GN=rpmB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.938e-16 Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TG K+N VS S+ +T K Q VNLQ +++WWE GK++V +++STKALK+I+K GLD AK G+DL K Sbjct: 3 RVCELTGAKANNGMAVSHSHIRTKKLQQVNLQKRRLWWEEGKKWVNIKISTKALKSIQKVGLDKFAKSNGVDLNK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_PROMS (50S ribosomal protein L28 OS=Prochlorococcus marinus (strain AS9601) GN=rpmB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.717e-16 Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 R C TG K+N VS S+ +T K Q VNLQ +++WWE GK++V +++STKALK+I+K GLD AK G+DL+K Sbjct: 3 RACELTGAKANNGMAVSHSHIRTKKLQQVNLQKRRLWWEEGKKWVNIKISTKALKSIQKVGLDKFAKSNGVDLKK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_PROM5 (50S ribosomal protein L28 OS=Prochlorococcus marinus (strain MIT 9515) GN=rpmB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.773e-16 Identity = 38/75 (50.67%), Postives = 55/75 (73.33%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TG ++N VS S+ +T K Q VNLQ +++WW+ GK+++ +++STKALK+I+K GLD VAK G+DL K Sbjct: 3 RVCELTGARANNGMAVSHSHIRTKKLQQVNLQKRRLWWQEGKKWINIKISTKALKSIQKVGLDKVAKTNGVDLNK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_SYNPW (50S ribosomal protein L28 OS=Synechococcus sp. (strain WH7803) GN=rpmB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.146e-15 Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TG K+N VS S+ +T K Q NLQ +++WW GKR+V LR++T+ALKTI+K GL A AK GIDL + Sbjct: 3 RVCQLTGTKANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGKRWVNLRITTRALKTIQKKGLGAYAKSLGIDLAR 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_SYNR3 (50S ribosomal protein L28 OS=Synechococcus sp. (strain RCC307) GN=rpmB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.496e-15 Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC +GK++N VS S+ +T K Q VNLQ +++WW G R+VKLR+ST AL+TI+K GL A AK+ GI+L K Sbjct: 3 RVCQLSGKRANNGMAVSHSHVRTKKLQQVNLQQRRLWWAEGNRWVKLRVSTSALRTIQKKGLGAYAKELGINLAK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_PROMM (50S ribosomal protein L28 OS=Prochlorococcus marinus (strain MIT 9313) GN=rpmB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.334e-15 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TG ++N VS S+ +T K Q NLQ +++WW G R++KLR+ST+ALKTI+K GL AK GIDL K Sbjct: 3 RVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGNRWLKLRVSTRALKTIQKKGLGVYAKSLGIDLNK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_PROMA (50S ribosomal protein L28 OS=Prochlorococcus marinus GN=rpmB PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.334e-15 Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC +G ++N VS S+ +T K Q NLQ +++WWE GK+++ +R+ST LKTI+K GLD+ AK GIDL+K Sbjct: 3 RVCELSGTRANNGMAVSHSHIRTKKLQQANLQKRRLWWEEGKKWLNIRVSTSTLKTIQKKGLDSYAKSQGIDLKK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_PROM4 (50S ribosomal protein L28 OS=Prochlorococcus marinus (strain MIT 9211) GN=rpmB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.334e-15 Identity = 37/75 (49.33%), Postives = 54/75 (72.00%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC +G ++N VS S+ +T K Q NLQ +K+WWE GK+++K+R++T+ LKTI+K GL++ AK GIDL K Sbjct: 3 RVCDLSGTRANNGMAVSHSHIRTKKLQQANLQQRKLWWEEGKKWIKVRVTTRTLKTIQKKGLNSYAKAMGIDLSK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_PROM3 (50S ribosomal protein L28 OS=Prochlorococcus marinus (strain MIT 9303) GN=rpmB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.334e-15 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TG ++N VS S+ +T K Q NLQ +++WW G R++KLR+ST+ALKTI+K GL AK GIDL K Sbjct: 3 RVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGNRWLKLRVSTRALKTIQKKGLGVYAKSLGIDLNK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_SYNSC (50S ribosomal protein L28 OS=Synechococcus sp. (strain CC9605) GN=rpmB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.686e-15 Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TG ++N VS S+ +T K Q NLQ +++WW G R+VKLR++T+ALKTI+K GL A AK GI+L K Sbjct: 3 RVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGNRWVKLRVTTRALKTIQKKGLGAYAKSLGINLAK 77 The following BLAST results are available for this feature:
BLAST of EY659140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659140 ID=EY659140; Name=EY659140; organism=Citrus sinensis; type=EST; length=823bpback to top |