EY659102
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC1_SOLLC (Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopersicum GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20 Identity = 58/129 (44.96%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 62 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 412 MV AVAV+ + G GT F+ G PTTV G++SGL PG H +H G+ +N +STGP + PAG + G L NITV +G A+F I K IPL+G S+IGR +VVH+ P D G G Sbjct: 1 MVKAVAVLNSSEGVSGTYLFTQVGVAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPD-DLGKG 128
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC1_BRAJU (Superoxide dismutase [Cu-Zn] 1 OS=Brassica juncea GN=SODCC1 PE=2 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 61/150 (40.67%), Postives = 80/150 (53.33%), Query Frame = 2 Query: 62 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 436 M V V+ + G KGT+ F+ EG+G TTV G++SGL PG H +H G+ +N +STGP F P G G L NITV +G ATF I + IPL G NS++GR +VVH+ P + + G VA G IGL Sbjct: 1 MGKGVRVLNSSEGVKGTIFFTQEGNGTTTVTGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPEGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDSQIPLDGPNSIVGRAVVVHAEPDDLGKGGHELSLTTGNAGGRVACGIIGL 150
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_PINSY (Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris GN=SODCC PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 55/129 (42.64%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 62 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 412 ++ AV V+ G KG V F+ EG GPTTV G +SGL PG H +H G+ +N +STGP F P G + G L N+TV ++G F I + IPLSG +S++GR +VVH+ P D G G Sbjct: 3 LLKAVVVLNGAADVKGVVQFTQEGDGPTTVTGKISGLSPGLHGFHVHALGDTTNGCMSTGPHFNPLGKEHGAPTDDNRHAGDLGNVTVGTDGTVEFSITDSQIPLSGPHSIVGRAVVVHADPD-DLGKG 130
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_ARATH (Superoxide dismutase [Cu-Zn] OS=Arabidopsis thaliana GN=SODCC PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 61/150 (40.67%), Postives = 79/150 (52.67%), Query Frame = 2 Query: 62 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYK-TIPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 436 M VAV+ + G GT+ F+ EG G TTV G++SGL PG H +H G+ +N +STGP F P G G L NITV +G ATF I IPL+G NS++GR +VVH+ P + + G VA G IGL Sbjct: 1 MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSLATGNAGGRVACGIIGL 150
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC2_BRAJU (Superoxide dismutase [Cu-Zn] 2 OS=Brassica juncea GN=SODCC2 PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 62/150 (41.33%), Postives = 79/150 (52.67%), Query Frame = 2 Query: 62 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYK-TIPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 436 M VAV+ + G KGT+ F+ EG G TTV G++SGL PG H +H G+ +N +STGP F P G G L NI V +G ATF I IPLSG NS++GR +VVH+ P + + G VA G IGL Sbjct: 1 MGKGVAVLNSSEGVKGTIFFAQEGEGKTTVTGTVSGLKPGLHGFHVHALGDTTNGSMSTGPHFNPDGKQHGAPEDANRHAGDLGNIIVGDDGTATFTITDCQIPLSGPNSIVGRAVVVHADPDVLGKGGHELSLTTGNAGGRVACGIIGL 150
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_SOYBN (Superoxide dismutase [Cu-Zn] OS=Glycine max GN=SOD1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 56/129 (43.41%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 62 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 412 MV AVAV+ + G GT+ F+ EG+GPTTV GSL+GL PG H +H G+ +N +STG F P + G L N+ V +G +F I + IPL+G NS+IGR +VVH+ S D G G Sbjct: 1 MVKAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHAD-SDDLGKG 128
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17 Identity = 58/148 (39.19%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 71 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 439 AVAV+ GT+ +G V+ S E GPTTV ++GL PG+H +H +G+ +N +STG F P G G L NI +EG+A I T IPLSG N+VIGR LVVH S + + G +A G +GL+ Sbjct: 63 AVAVLKGTSSVEGVVTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 210
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17 Identity = 61/161 (37.89%), Postives = 84/161 (52.17%), Query Frame = 2 Query: 32 SKGVVISHSTMVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP----AGAD-------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 439 SK + I +T AVAV+ GT+ +G V+ + E GPTTV +SGL PG H +H +G+ +N +STGP F P GA G L NI ++G+A I IPL+G NSV+GR LVVH S + + G +A G +GL+ Sbjct: 61 SKPLTIVAATK-KAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSPTTGNAGGRLACGVVGLT 220
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17 Identity = 58/161 (36.02%), Postives = 84/161 (52.17%), Query Frame = 2 Query: 32 SKGVVISHSTMVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 439 ++ +V++ +T AVAV+ GT+ +G V+ + + GPTTV ++GL PG H +H +G+ +N ISTGP F P G L NI +EG+A I K IPLSG NSV+GR VVH S + + G +A G +GL+ Sbjct: 50 ARALVVADATK-KAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLT 209
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.022e-16 Identity = 55/148 (37.16%), Postives = 77/148 (52.03%), Query Frame = 2 Query: 71 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 439 AVAV+ GT+ +G V+ + + GPTTVK ++GL PG H +H +G+ +N +STGP F P G G L NI + G+A + IPLSG NSV+GR LVVH S + + G +A G +GL+ Sbjct: 70 AVAVLKGTSNVEGVVTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTNGCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 217 The following BLAST results are available for this feature:
BLAST of EY659102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659102 ID=EY659102; Name=EY659102; organism=Citrus sinensis; type=EST; length=699bpback to top |