EY659102
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_BRUPA (Superoxide dismutase [Cu-Zn] OS=Brugia pahangi GN=SODC PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13 Identity = 51/129 (39.53%), Postives = 65/129 (50.39%), Query Frame = 2 Query: 68 NAVAVITGTNGRKGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDGV 415 N +AV+ G N G + F E G PTT+ G + GL PG H +H YG+ +N IS GP F P G L NI ++G A +I K + L G NS+IGR LVVH+ D G GV Sbjct: 4 NRIAVLRGDNV-SGIIRFKQEKEGSPTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGGPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHAD-QDDLGKGV 130
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_XIPGL (Superoxide dismutase [Cu-Zn] OS=Xiphias gladius GN=sod1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 47/129 (36.43%), Postives = 65/129 (50.39%), Query Frame = 2 Query: 62 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGS-LSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKTIPLSGTNSVIGRGLVVHSSPSPDPGDG 412 ++ AV V+ G GTV F EG+ KG L GL PG+H +H +G+ +N IS GP F PA G L N+T + G+A +I I L+G S+IGR +V+H + D G G Sbjct: 2 VLKAVCVLRGAGETTGTVYFEQEGNANAVGKGIILKGLTPGEHGFHVHGFGDNTNGCISAGPHFNPASKKHAGPKDEDRHVGDLGNVTADANGVAKIDITDKISLTGPYSIIGRTMVIHEK-ADDLGRG 129
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_DANRE (Superoxide dismutase [Cu-Zn] OS=Danio rerio GN=sod1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 51/131 (38.93%), Postives = 67/131 (51.15%), Query Frame = 2 Query: 62 MVN-AVAVITGTNGRKGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 412 MVN AV V+ GT GTV F+ EG P V G ++GL PG H +H +G+ +N IS GP F P G L N+T + G+A EI + LSG +S+IGR +V+H D G G Sbjct: 1 MVNKAVCVLKGTGEVTGTVYFNQEGEKKPVKVTGEITGLTPGKHGFHVHAFGDNTNGCISAGPHFNPHDKTHGGPTDSVRHVGDLGNVTADASGVAKIEIEDAMLTLSGQHSIIGRTMVIHEK-EDDLGKG 130
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_HAECO (Superoxide dismutase [Cu-Zn] OS=Haemonchus contortus GN=SOD PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 49/128 (38.28%), Postives = 67/128 (52.34%), Query Frame = 2 Query: 71 AVAVITGTNGRKGTVSFSVEG-SGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDGV 415 AVAV+ G G GTV FS + S P +KG + GL PG H +H YG+ +N S GP F P G L N+ ++G+A FEI + + G ++V+GR LVVH+ + D G GV Sbjct: 5 AVAVLRGDPGVTGTVWFSQDKESDPCVIKGEIKGLTPGLHGFHVHQYGDSTNGCTSAGPHFNPFNKTHGGPKDDVRHVGDLGNVEAGADGVAHFEIKDHLVKIHGEHTVVGRSLVVHAG-TDDLGKGV 131
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_CAVPO (Superoxide dismutase [Cu-Zn] OS=Cavia porcellus GN=SOD1 PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 45/126 (35.71%), Postives = 63/126 (50.00%), Query Frame = 2 Query: 71 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 412 AV V+ G +G + F + +GP VKG ++GL G H +H +G+ + S GP F P G L N+T ++G+A I + I LSG NS+IGR +VVH P D G G Sbjct: 5 AVCVLKGDGPVQGIIHFEQKANGPVVVKGRITGLVEGKHGFHVHEFGDNTQGCTSAGPHFNPLSKKHGGPQDEERHVGDLGNVTAGADGVANVSIEDSLISLSGANSIIGRTMVVHEKPD-DLGKG 129
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODE_BRUPA (Extracellular superoxide dismutase [Cu-Zn] OS=Brugia pahangi PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 49/128 (38.28%), Postives = 64/128 (50.00%), Query Frame = 2 Query: 71 AVAVITGTNGR-KGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDGV 415 A+AV+ NG GT+ F + TT+ G + GL PG H +H YG+ +N IS GP F P G L NI ++G A +I K + L G NS+IGR LVVH+ D G GV Sbjct: 48 AIAVLHSDNGNINGTIHFQ-QDKNSTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGDPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHAD-QDDLGKGV 173
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC6_DICDI (Probable superoxide dismutase [Cu-Zn] 6 OS=Dictyostelium discoideum GN=sodF PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 48/121 (39.67%), Postives = 65/121 (53.72%), Query Frame = 2 Query: 62 MVNAVAVITGTNGRKGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKTI-PLSGTNSVIGRGLVVHS 385 MVNA+ +I G G +G V+ S E G P + G++SGL PG H + +H +G+ SN IS G + P + G L NI S G+AT I TI L G SV+GR +V+HS Sbjct: 1 MVNAIVIIKGL-GVEGKVTLSQECEGSPIYINGTVSGLTPGQHGMHVHEFGDTSNGCISAGDHYNPLHREHGSPLDVERHIGDLGNIKALSNGVATISIRDTIMSLFGDISVMGRTMVIHS 120
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_PIG (Superoxide dismutase [Cu-Zn] OS=Sus scrofa GN=SOD1 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 45/126 (35.71%), Postives = 62/126 (49.21%), Query Frame = 2 Query: 71 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 412 AV V+ G +GT+ F ++G V G++ GL GDH +H +G+ + S GP F P G L N+T +G+AT I I LSG +S+IGR +VVH P D G G Sbjct: 5 AVCVLKGDGPVQGTIYFELKGEKTVLVTGTIKGLAEGDHGFHVHQFGDNTQGCTSAGPHFNPESKKHGGPKDQERHVGDLGNVTAGKDGVATVYIEDSVIALSGDHSIIGRTMVVHEKPD-DLGRG 129
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_CANFA (Superoxide dismutase [Cu-Zn] OS=Canis familiaris GN=SOD1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 47/150 (31.33%), Postives = 72/150 (48.00%), Query Frame = 2 Query: 65 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 439 + AV V+ G +GT+ F +GSGP V G+++GL G+H +H + + + S GP F P G L N+T +G+A I + I LSG S+IGR +VVH S+ + + G +A G IG++ Sbjct: 3 MKAVCVLKGQGPVEGTIHFVQKGSGPVVVSGTITGLTEGEHGFHVHQFEDXTQGCTSAGPHFNPLSKKHGGPKDQERHVGDLGNVTAGKDGVAIVSIEDSLIALSGDYSIIGRTMVVHEKRDDLGKGDNEESTQTGNAGSRLACGVIGIA 152
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC1_XENLA (Superoxide dismutase [Cu-Zn] A OS=Xenopus laevis GN=sod1-A PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 47/129 (36.43%), Postives = 62/129 (48.06%), Query Frame = 2 Query: 62 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 412 MV AV V+ G+ KG V F + G TV+G + GL G+H IH +G+ +N +S GP F P + G L N+T G+A F+ I L G S+IGR VVH D G G Sbjct: 1 MVKAVCVLAGSGDVKGVVRFEQQDDGDVTVEGKIEGLTDGNHGFHIHVFGDNTNGCLSAGPHFNPQNKNHGSPKDADRHVGDLGNVTAEG-GVAQFKFTDPQISLKGERSIIGRTAVVHEK-QDDLGKG 127 The following BLAST results are available for this feature:
BLAST of EY659102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659102 ID=EY659102; Name=EY659102; organism=Citrus sinensis; type=EST; length=699bpback to top |