EY659102
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_CARCR (Superoxide dismutase [Cu-Zn] OS=Caretta caretta PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = 2 Query: 104 KGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 412 KG + F +G+GP T+ GS++GL G H +H +G+ +N S G F P G + G L N+ EG+A I + I L+G+ S+IGR +VVH D G G Sbjct: 29 KGIIYFEQQGNGPVTLSGSITGLTEGKHGFHVHEFGDNTNGCTSAGAHFNPPGKNHGGPQDNERHVGDLGNVIANKEGVAEVCIKDSLISLTGSQSIIGRTMVVHEK-EDDLGKG 142
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_CALJA (Superoxide dismutase [Cu-Zn] OS=Callithrix jacchus GN=SOD1 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 49/151 (32.45%), Postives = 71/151 (47.02%), Query Frame = 2 Query: 65 VNAVAVITGTNGRKGTVSFSV-EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 439 + AV V+ G +GT++F E +GP V GS++GL G H +H +G+ + S GP F P G L N+T +G+A I I LSG +S+IGR LVVH S + + G +A G IG++ Sbjct: 3 MKAVCVLKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGIA 153
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_CAEBR (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis briggsae GN=sod-1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 47/128 (36.72%), Postives = 65/128 (50.78%), Query Frame = 2 Query: 71 AVAVITGTNGRKGTVSFSVEG-SGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDGV 415 AVAV+ G + GT+ + S P ++G + GL PG H +H YG+ +N +S GP F P G G L N+ ++G+A I K I L G N+VIGR +VVH+ D G GV Sbjct: 27 AVAVLRG-DVVSGTIWITQNSESDPAVIEGEIKGLTPGLHGFHVHQYGDSTNGCLSAGPHFNPFGKTHGGPNSETRHVGDLGNVEAGADGVAKVHITDKLITLYGANTVIGRSMVVHAG-QDDLGQGV 152
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_CERCA (Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata GN=Sod PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 49/130 (37.69%), Postives = 64/130 (49.23%), Query Frame = 2 Query: 62 MVNAVAVITGTNGRKGTVSFSVEGS-GPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 412 +V AV VI G KGTV F + + P V G ++GL G H +H +G+ +N S GP F P G G L NI + +G EI K I L G NS++GR +VVH+ P D G G Sbjct: 2 VVKAVCVINGDV--KGTVHFEQQDAKSPVLVTGEVNGLAKGLHGFHVHEFGDNTNGCTSAGPHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISDKLITLFGENSIVGRTIVVHADPD-DLGKG 128
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_BOVIN (Superoxide dismutase [Cu-Zn] OS=Bos taurus GN=SOD1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 45/126 (35.71%), Postives = 60/126 (47.62%), Query Frame = 2 Query: 71 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 412 AV V+ G +GT+ F +G V GS++GL GDH +H +G+ + S GP F P G L N+T G+A +I I LSG S+IGR +VVH P D G G Sbjct: 5 AVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPD-DLGRG 128
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_MACMU (Superoxide dismutase [Cu-Zn] OS=Macaca mulatta GN=SOD1 PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11 Identity = 50/152 (32.89%), Postives = 74/152 (48.68%), Query Frame = 2 Query: 65 VNAVAVITGTNGRKGTVSFSV-EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIA--TFEIYKTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 439 + AV V+ G + +GT++F E +GP V GS++GL G H +H +G+ + S GP F P G L N+T +G+A +FE I LSG +S+IGR LVVH S + + G +A G IG++ Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFE-DSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGIA 153
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_MACFU (Superoxide dismutase [Cu-Zn] OS=Macaca fuscata fuscata GN=SOD1 PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11 Identity = 50/152 (32.89%), Postives = 74/152 (48.68%), Query Frame = 2 Query: 65 VNAVAVITGTNGRKGTVSFSV-EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIA--TFEIYKTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 439 + AV V+ G + +GT++F E +GP V GS++GL G H +H +G+ + S GP F P G L N+T +G+A +FE I LSG +S+IGR LVVH S + + G +A G IG++ Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFE-DSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGIA 153
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_MACFA (Superoxide dismutase [Cu-Zn] OS=Macaca fascicularis GN=SOD1 PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11 Identity = 50/152 (32.89%), Postives = 74/152 (48.68%), Query Frame = 2 Query: 65 VNAVAVITGTNGRKGTVSFSV-EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIA--TFEIYKTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 439 + AV V+ G + +GT++F E +GP V GS++GL G H +H +G+ + S GP F P G L N+T +G+A +FE I LSG +S+IGR LVVH S + + G +A G IG++ Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFE-DSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGIA 153
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_RAT (Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus GN=Sod1 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 47/151 (31.13%), Postives = 72/151 (47.68%), Query Frame = 2 Query: 65 VNAVAVITGTNGRKGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP------AGAD-----GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 439 + AV V+ G +G + F + SG P V G ++GL G+H +H YG+ + + GP F P AD G L N+ +G+A I + I LSG +S+IGR +VVH S+ + + G +A G IG++ Sbjct: 3 MKAVCVLKGDGPVQGVIHFEQKASGEPVVVSGQITGLTEGEHGFHVHQYGDNTQGCTTAGPHFNPHSKKHGGPADEERHVGDLGNVAAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGIA 153
BLAST of EY659102 vs. ExPASy Swiss-Prot
Match: SODC_DROWI (Superoxide dismutase [Cu-Zn] OS=Drosophila willistoni GN=Sod PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 49/130 (37.69%), Postives = 65/130 (50.00%), Query Frame = 2 Query: 62 MVNAVAVITGTNGRKGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 412 +V AV VI G KGTV F E +G P V G ++GL G H +H +G+ +N +S+GP F P + G L NI + G I + I L G NS+IGR +VVH+ P D G G Sbjct: 2 VVKAVCVINGD--AKGTVFFEQEDNGAPVKVTGEVTGLGKGLHGFHVHEFGDNTNGCMSSGPHFNPHSKEHGAPGDENRHLGDLGNIEASGSGPTAVNITDSKITLVGANSIIGRTVVVHADPD-DLGKG 128 The following BLAST results are available for this feature:
BLAST of EY659102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659102 ID=EY659102; Name=EY659102; organism=Citrus sinensis; type=EST; length=699bpback to top |