EY659100 | Citrus Genome Database

Overview


Name	EY659100
Unique Name	EY659100
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	888

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.726e-28
Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 3

Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            +L PVD FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  + L F +L E S+FAK WVPFCK+Y+++ RAP  YF
Sbjct:  353 QLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYF 436

HSP 2 Score: 34.2686 bits (77), Expect = 3.726e-28
Identity = 15/38 (39.47%), Postives = 20/38 (52.63%), Query Frame = 1

Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W ++ +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  307 WLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLR 344

[Close]

BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.055e-28
Identity = 55/112 (49.11%), Postives = 73/112 (65.18%), Query Frame = 3

Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDK 737
            +L  VD+FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  + L F +L E S+FA+ WVPF KKYN++ RAP  YF                 D + MK+EY++
Sbjct:  351 QLAAVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFVKKYNIEPRAPEWYFSQKIDYLKDKVHPSFVKDRRAMKREYEE 462

HSP 2 Score: 35.4242 bits (80), Expect = 4.055e-28
Identity = 16/38 (42.11%), Postives = 20/38 (52.63%), Query Frame = 1

Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W L+ +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  305 WLLSVICEIWFALSWILDQFPKWFPINRETYLDRLALR 342

HSP 3 Score: 21.557 bits (44), Expect = 4.055e-28
Identity = 8/28 (28.57%), Postives = 15/28 (53.57%), Query Frame = 2

Query:  800 TXFSNTERMNHPTIVKVYPENKGGLSDE 883
            T +      +HP +++V+  + GGL  E
Sbjct:  488 TPWPGNNTRDHPGMIQVFLGHSGGLDTE 515

[Close]

BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.266e-28
Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 3

Query:  411 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            L P+D FV+T D   EPPIIT NTVLS+LAVDYPV +++CYVSDD  S L F +L E ++FA+ WVPFCKK+ ++ RAP  YF
Sbjct:  289 LAPIDFFVSTVDPLKEPPIITANTVLSILAVDYPVDRVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKFTIEPRAPEFYF 371

HSP 2 Score: 36.1946 bits (82), Expect = 5.266e-28
Identity = 16/38 (42.11%), Postives = 21/38 (55.26%), Query Frame = 1

Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W  + +CE  F   WIL    KW+P+T +TY  RL  R
Sbjct:  242 WLASVICELWFALSWILDQLPKWSPVTRETYLDRLALR 279

HSP 3 Score: 21.9422 bits (45), Expect = 5.266e-28
Identity = 11/45 (24.44%), Postives = 22/45 (48.89%), Query Frame = 2

Query:  749 IEHAAKRPSLFDLTRRMTXFSNTERMNHPTIVKVYPENKGGLSDE 883
            +  A K+P    + +  T +      +HP +++VY  ++G L  E
Sbjct:  408 VAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSQGALDVE 452

[Close]

BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.322e-28
Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 3

Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            +L  VD FV+T D   EPP+IT NTVLS+LA+DYPV K++CYVSDD  + L+F SLVE + FA+ WVPFCKKY+++ RAP  YF
Sbjct:  259 QLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDGAAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYF 342

HSP 2 Score: 35.039 bits (79), Expect = 6.322e-28
Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1

Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W  + +CE  F   W+L    KW+P+  +TY  RL  R
Sbjct:  213 WLTSVICEIWFAVSWVLDQFPKWSPINRETYIDRLSAR 250

[Close]

BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.070e-27
Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 3

Query:  411 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            L PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L + ++FA+ WVPFCKK+N++ RAP  YF
Sbjct:  353 LAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSDTAEFARKWVPFCKKFNIEPRAPEWYF 435

HSP 2 Score: 33.113 bits (74), Expect = 1.070e-27
Identity = 15/38 (39.47%), Postives = 19/38 (50.00%), Query Frame = 1

Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W  + +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  306 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLR 343

[Close]

BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.070e-27
Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 3

Query:  411 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            L PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L E ++FA+ WVPFCKKY ++ RAP  YF
Sbjct:  352 LSPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYCIEPRAPEWYF 434

HSP 2 Score: 33.8834 bits (76), Expect = 1.070e-27
Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1

Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W ++ +CE  F   W+L    KW P+  +TY  RL  R
Sbjct:  305 WLISVICEIWFAVSWVLDQFPKWYPIERETYLDRLSLR 342

[Close]

BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.070e-27
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 3

Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            +L P+D+FV+T D   EPP+IT NTVLS+LAVDYPV K++CYVSDD  + L F +L E ++FA+ WVPFCKK+N++ RAP  YF
Sbjct:  347 QLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYF 430

HSP 2 Score: 33.4982 bits (75), Expect = 1.070e-27
Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1

Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W ++ +CE  F   W+L    KW P+  +TY  RL  R
Sbjct:  301 WLVSVICEIWFALSWLLDQFPKWYPINRETYLDRLALR 338

[Close]

BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.070e-27
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 3

Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            +L P+D+FV+T D   EPP+IT NTVLS+LAVDYPV K++CYVSDD  + L F +L E ++FA+ WVPFCKK+N++ RAP  YF
Sbjct:  347 QLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYF 430

HSP 2 Score: 33.4982 bits (75), Expect = 1.070e-27
Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1

Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W ++ +CE  F   W+L    KW P+  +TY  RL  R
Sbjct:  301 WLVSVICEIWFALSWLLDQFPKWYPINRETYLDRLALR 338

[Close]

BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.071e-27
Identity = 56/119 (47.06%), Postives = 76/119 (63.87%), Query Frame = 3

Query:  411 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDKLSQT*NMQ 761
            L PVD+FV+T D   EPP++T NTVLS+LA+DYPV K++CYVSDD  S L F SL E ++FA+ WVPFCKK++++ RAP  YF                 + + MK+EY++     N Q
Sbjct:  314 LAPVDVFVSTVDPLKEPPLVTSNTVLSILAMDYPVEKISCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYFTLKVDYLQDKVHPTFVKERRAMKREYEEFKVRINAQ 432

HSP 2 Score: 33.113 bits (74), Expect = 1.071e-27
Identity = 15/38 (39.47%), Postives = 19/38 (50.00%), Query Frame = 1

Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W  + +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  267 WLTSVICEIWFAVSWILDQFPKWFPIERETYLDRLSLR 304

[Close]

BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.359e-27
Identity = 55/124 (44.35%), Postives = 81/124 (65.32%), Query Frame = 3

Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXLP--ADWKNMKKEYDKLSQT*NMQPKDL 773
            +LP +D+FV+TAD E EPP++T NT+LS+LAVDYPV K++CY+SDD  + L+F ++ EA+ FA LWVPFC+K+N++ R P  YF            +    D + +K+EYD+     N  P  +
Sbjct:  352 DLPGIDLFVSTADPEKEPPLVTANTILSILAVDYPVEKVSCYLSDDGGALLSFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRIDFVKDRRKIKREYDEFKVRINGLPDSI 475

HSP 2 Score: 26.9498 bits (58), Expect = 2.359e-27
Identity = 12/38 (31.58%), Postives = 20/38 (52.63%), Query Frame = 1

Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W ++ +CE  F F WIL    K  P+   T  + L+++
Sbjct:  301 WLMSIICELWFGFSWILDQIPKLCPINRSTDLEVLRDK 338

The following BLAST results are available for this feature:

BLAST of EY659100 vs. ExPASy Swiss-Prot

BLAST of EY659100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65


Match Name	E-value	Identity	Description
CESA5_ORYSI	3.726e-28	60.71	Probable cellulose synthase A catalytic subunit 5 ...	[more]
CESA8_ORYSJ	4.055e-28	49.11	Probable cellulose synthase A catalytic subunit 8 ...	[more]
CESA7_ORYSJ	5.266e-28	60.24	Cellulose synthase A catalytic subunit 7 [UDP-form...	[more]
CESA8_ARATH	6.322e-28	60.71	Cellulose synthase A catalytic subunit 8 [UDP-form...	[more]
CESA2_ARATH	1.070e-27	61.45	Cellulose synthase A catalytic subunit 2 [UDP-form...	[more]
CESA6_ARATH	1.070e-27	62.65	Cellulose synthase A catalytic subunit 6 [UDP-form...	[more]
CESA1_ORYSJ	1.070e-27	59.52	Probable cellulose synthase A catalytic subunit 1 ...	[more]
CESA1_ORYSI	1.070e-27	59.52	Probable cellulose synthase A catalytic subunit 1 ...	[more]
CESA7_ARATH	1.071e-27	47.06	Cellulose synthase A catalytic subunit 7 [UDP-form...	[more]
CSLD4_ARATH	2.359e-27	44.35	Cellulose synthase-like protein D4 OS=Arabidopsis ...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-001-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659100 ID=EY659100; Name=EY659100; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGTTTTTCAAGCTCATGGCCAATACAAAGTCGTCATGTCT
CCCTCTATACGAAAAAGTTTTTCATAAAAACACATATCATAGGGCTTTAG
ATGTTATCATCTTGTTCCTTCTTCTATGTCTGCTCTTCTATCGGCTCTCA
ACGTTGAAGAATCATGGATTTGCTTGGTTTCTTGCTTTTCTATGTGAGTC
TTGTTTTACTTTCATCTGGATTCTCATCGTCAACTGCAAGTGGACTCCTT
TGACCTACAAAACATATCCCCAACGTCTCCAAGAAAGGTAACAAATCAAA
TAACGTTAGCATTAATAATTTCCGCATCATTTGCAATTGTCTTTGTCATT
TTGCAAGTTACTACACACACACACACACACACATGTGTACGACTCAACAG
GATACAGGAGCTGCCCCCAGTGGACATGTTTGTGACAACTGCTGATGCTG
AACTCGAGCCGCCAATCATCACTGTAAACACAGTGCTGTCTTTGTTGGCA
GTTGATTATCCAGTTCACAAGCTCGCTTGCTATGTTTCTGATGATGCCTG
CTCACCTCTCAATTTCTACTCTCTTGTTGAAGCTTCTAAATTCGCTAAGC
TTTGGGTTCCATTCTGTAAAAAGTATAATGTTCAAATTAGAGCTCCCTTT
AGATACTTCCCAGATAGTGAGCCGTCCGATTCCAGNTCAGGGGGACTCCC
TGCAGACTGGAAAAACATGAAGAAAGAGTATGATAAACTTAGCCAAACAT
AGAACATGCAGCCAAAAGACCTTCTTTATTTGATCTAACAAGAAGAATGA
CTGNTTTCTCCAATACAGAACGCATGAATCATCCCACAATAGTGAAGGTA
TATCCGGAGAACAAGGGAGGCCTCTCAGATGAGATCCA