EY659100

Overview
NameEY659100
Unique NameEY659100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21
Identity = 51/112 (45.54%), Postives = 76/112 (67.86%), Query Frame = 3
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDK 737
            ELP VD+FVTT D   EP + TVN++LS+LA DYPV + ACY+SDD  + +++ ++VE +KFA+LWVPFC+K+ V+ RAP  YF              L +D + +++EY++
Sbjct:  174 ELPGVDVFVTTVDPVDEPILYTVNSILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRAPESYFAMKTQAYRGGVAGELMSDRRRVRREYEE 285          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21
Identity = 50/112 (44.64%), Postives = 76/112 (67.86%), Query Frame = 3
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDK 737
            +LP VD+FVTT D   EP + TVNT+LS+LA DYPV + ACY+SDD  + +++ ++VE +KFA+LWVPFC+K+ V+ R+P  YF              L +D + +++EY++
Sbjct:  168 DLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRREYEE 279          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21
Identity = 50/112 (44.64%), Postives = 76/112 (67.86%), Query Frame = 3
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDK 737
            +LP VD+FVTT D   EP + TVNT+LS+LA DYPV + ACY+SDD  + +++ ++VE +KFA+LWVPFC+K+ V+ R+P  YF              L +D + +++EY++
Sbjct:  138 DLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRREYEE 249          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.722e-21
Identity = 50/121 (41.32%), Postives = 73/121 (60.33%), Query Frame = 3
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDKLSQT*NMQP 764
            +LP +D+F++TAD   EP ++T NT+LS+LA +YPV KL  Y+SDD  + L F S+ EA  FAK+WVPFC+K++++ R P  YF                 D + +K+EYD+     N  P
Sbjct:  235 DLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFVKDRRWIKREYDEFKIRVNSLP 355          

HSP 2 Score: 24.6386 bits (52), Expect = 2.722e-21
Identity = 11/38 (28.95%), Postives = 18/38 (47.37%), Query Frame = 1
Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W ++ +CE  F F W+L    K  P+        L+E+
Sbjct:  184 WGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEK 221          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.722e-21
Identity = 50/121 (41.32%), Postives = 73/121 (60.33%), Query Frame = 3
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDKLSQT*NMQP 764
            +LP +D+F++TAD   EP ++T NT+LS+LA +YPV KL  Y+SDD  + L F S+ EA  FAK+WVPFC+K++++ R P  YF                 D + +K+EYD+     N  P
Sbjct:  235 DLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFVKDRRWIKREYDEFKIRVNSLP 355          

HSP 2 Score: 24.6386 bits (52), Expect = 2.722e-21
Identity = 11/38 (28.95%), Postives = 18/38 (47.37%), Query Frame = 1
Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W ++ +CE  F F W+L    K  P+        L+E+
Sbjct:  184 WGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEK 221          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.558e-21
Identity = 45/85 (52.94%), Postives = 64/85 (75.29%), Query Frame = 3
Query:  405 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            ++ P +D+F+ TAD   EPP++ VNT LS++A +YP  K++ YVSDD  S L F++L+EA+KF+K W+PFCKK NVQ R+P  YF
Sbjct:   96 EDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTFFALIEAAKFSKQWLPFCKKNNVQDRSPEVYF 180          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.720e-20
Identity = 51/111 (45.95%), Postives = 66/111 (59.46%), Query Frame = 3
Query:  411 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDK 737
            L  VD+FV  ADA  EPP+ T NTVLS+LA DYP   +ACYV DD    L F SL EA+ FA+ W+PFC+++ V+ RAP  YF                 D + MK+EY++
Sbjct:  124 LAGVDVFVAAADAAREPPLATANTVLSVLAADYPAGGVACYVHDDGADMLVFESLFEAAGFARRWIPFCRRHGVEPRAPELYFARGVDYLRDRAAPSFVKDRRAMKREYEE 234          

HSP 2 Score: 23.0978 bits (48), Expect = 1.720e-20
Identity = 11/38 (28.95%), Postives = 15/38 (39.47%), Query Frame = 1
Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W  +  CE      W++    K +P    TY  RL  R
Sbjct:   77 WVTSVACELWLAASWLIAQLPKLSPANRVTYLDRLASR 114          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20
Identity = 44/85 (51.76%), Postives = 63/85 (74.12%), Query Frame = 3
Query:  405 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            ++ P +D+F+ TAD   EPP++ VNT LS++A +YP HK++ YVSDD  S L  ++L+EA+KF+K W+PFCK  NVQ R+P  YF
Sbjct:   93 EDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYF 177          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.262e-20
Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 3
Query:  411 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDK 737
            LP +D+F+ T D   EP I T+N +LS+LA DYPV K ACY+SDD  S +++  L+E +KFA LWVPFC+K++++ RAP  YF                +D + M++EYD+
Sbjct:  169 LPGLDVFINTVDPINEPMIYTMNAILSILAADYPVDKHACYLSDDGGSIIHYDGLLETAKFAALWVPFCRKHSIEPRAPESYFAVKSRPYAGSAPEDFLSDHRYMRREYDE 279          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.039e-20
Identity = 44/85 (51.76%), Postives = 63/85 (74.12%), Query Frame = 3
Query:  405 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            ++ P +D+F+ TAD   EPP++ VNT LS++A +YP  K++ YVSDD  S L  ++L+EA+KF+K W+PFCKK NVQ R+P  YF
Sbjct:  115 EDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYF 199          
The following BLAST results are available for this feature:
BLAST of EY659100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLF4_ORYSJ1.567e-2145.54Mixed-linked glucan synthase 4 OS=Oryza sativa sub... [more]
CSLF2_ORYSJ1.567e-2144.64Mixed-linked glucan synthase 2 OS=Oryza sativa sub... [more]
CSLF1_ORYSJ1.567e-2144.64Putative mixed-linked glucan synthase 1 OS=Oryza s... [more]
CSLD5_ORYSJ2.722e-2141.32Cellulose synthase-like protein D5 OS=Oryza sativa... [more]
CSLD5_ORYSI2.722e-2141.32Putative cellulose synthase-like protein D5 OS=Ory... [more]
CSLG1_ARATH4.558e-2152.94Cellulose synthase-like protein G1 OS=Arabidopsis ... [more]
CESAB_ORYSJ1.720e-2045.95Putative cellulose synthase A catalytic subunit 11... [more]
CSLG2_ARATH1.732e-2051.76Cellulose synthase-like protein G2 OS=Arabidopsis ... [more]
CSLF8_ORYSJ2.262e-2044.14Probable mixed-linked glucan synthase 8 OS=Oryza s... [more]
CSLG3_ARATH5.039e-2051.76Cellulose synthase-like protein G3 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659100 ID=EY659100; Name=EY659100; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGTTTTTCAAGCTCATGGCCAATACAAAGTCGTCATGTCT
CCCTCTATACGAAAAAGTTTTTCATAAAAACACATATCATAGGGCTTTAG
ATGTTATCATCTTGTTCCTTCTTCTATGTCTGCTCTTCTATCGGCTCTCA
ACGTTGAAGAATCATGGATTTGCTTGGTTTCTTGCTTTTCTATGTGAGTC
TTGTTTTACTTTCATCTGGATTCTCATCGTCAACTGCAAGTGGACTCCTT
TGACCTACAAAACATATCCCCAACGTCTCCAAGAAAGGTAACAAATCAAA
TAACGTTAGCATTAATAATTTCCGCATCATTTGCAATTGTCTTTGTCATT
TTGCAAGTTACTACACACACACACACACACACATGTGTACGACTCAACAG
GATACAGGAGCTGCCCCCAGTGGACATGTTTGTGACAACTGCTGATGCTG
AACTCGAGCCGCCAATCATCACTGTAAACACAGTGCTGTCTTTGTTGGCA
GTTGATTATCCAGTTCACAAGCTCGCTTGCTATGTTTCTGATGATGCCTG
CTCACCTCTCAATTTCTACTCTCTTGTTGAAGCTTCTAAATTCGCTAAGC
TTTGGGTTCCATTCTGTAAAAAGTATAATGTTCAAATTAGAGCTCCCTTT
AGATACTTCCCAGATAGTGAGCCGTCCGATTCCAGNTCAGGGGGACTCCC
TGCAGACTGGAAAAACATGAAGAAAGAGTATGATAAACTTAGCCAAACAT
AGAACATGCAGCCAAAAGACCTTCTTTATTTGATCTAACAAGAAGAATGA
CTGNTTTCTCCAATACAGAACGCATGAATCATCCCACAATAGTGAAGGTA
TATCCGGAGAACAAGGGAGGCCTCTCAGATGAGATCCA
back to top