EY676433

Overview
NameEY676433
Unique NameEY676433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length979
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_PARD8 (Riboflavin biosynthesis protein ribBA OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ribBA PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.609e-25
Identity = 61/139 (43.88%), Postives = 90/139 (64.75%), Query Frame = 3
Query:   42 SSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFG-TTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455
            ++IE+A+   R+GKF+IVV+DE+ + EG+ ++AA   +P  + FM+K+G G++   + EE  Q L L +    A N    G  FTITVD   G  TTGVS  DRA+T+LAL+ P +KP +  RPGH+ PL+ R+ GV +
Sbjct:    7 NTIEEAIEDFREGKFLIVVDDEDRENEGDFIIAAEKVTPEKINFMLKNGRGVLCAPITEERCQELELDMQ--VANNTSLLGTPFTITVDKLGGKCTTGVSMYDRAETILALADPKTKPSDLGRPGHINPLRARSRGVLR 143          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_BACWK (Riboflavin biosynthesis protein ribBA OS=Bacillus weihenstephanensis (strain KBAB4) GN=ribBA PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.609e-25
Identity = 63/140 (45.00%), Postives = 88/140 (62.86%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNL-PLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455
            F  IE+AL  L+QGK VIV +DEN + EG+ +  A   +P  + FM+ HG G+V V + EE  +RL L P++S    N DS    FT+++D    TTTG+SA +RA T+  L +P SK  +F RPGH+FPL  + GGV +
Sbjct:    2 FHRIEEALEDLKQGKVVIVCDDENRENEGDFIALAEYITPETINFMITHGRGLVCVPITEEYAERLQLEPMVS---HNTDSHHTAFTVSID-HVSTTTGISAHERATTIQELLNPASKGSDFNRPGHIFPLIAKEGGVLR 137          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SALTY (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella typhimurium GN=ribB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.020e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL+ LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A     +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SALTI (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella typhi GN=ribB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.020e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL+ LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A     +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SALSV (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella schwarzengrund (strain CVM19633) GN=ribB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.020e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL+ LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A     +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SALPC (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella paratyphi C (strain RKS4594) GN=ribB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.020e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL+ LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A     +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SALPB (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ribB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.020e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL+ LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A     +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SALNS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella newport (strain SL254) GN=ribB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.020e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL+ LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A     +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SALHS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella heidelberg (strain SL476) GN=ribB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.020e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL+ LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A     +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SALG2 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=ribB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.020e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL+ LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A     +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
The following BLAST results are available for this feature:
BLAST of EY676433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
RIBBA_PARD84.609e-2543.88Riboflavin biosynthesis protein ribBA OS=Parabacte... [more]
RIBBA_BACWK4.609e-2545.00Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBB_SALTY6.020e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALTI6.020e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALSV6.020e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALPC6.020e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALPB6.020e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALNS6.020e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALHS6.020e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALG26.020e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676433 ID=EY676433; Name=EY676433; organism=Citrus sinensis; type=EST; length=979bp
CACGCGTCCGAGGTGATCCTGATTGCCCAACTGAAGGATTCTCCTCGATT
GAGCAGGCACTCAACACATTGCGCCAAGGAAAGTTTGTGATTGTTGTGGA
GGATGAAAATGGAGATGTTGAAGGAAACCTCGTCATGGCTGCATCTCTTA
CAAGTCCTCGGCATGTGGCTTTTATGGTTAAGCATGGTTCAGGAATTGTT
TCTGTAGGCATGAAAGAAGAGGATCTTCAAAGATTGAATCTACCATTGAT
GTCACCTGAAGCTGAAAATGAAGACTCTTGTGGCCCAACTTTCACAATCA
CAGTGGATGCAAAATTTGGCACAACTACTGGGGTATCGGCTTCAGATAGG
GCAAAGACTGTTCTTGCTCTTTCATCTCCAGATTCTAAGCCAGAAAACTT
CAGGAGGCCAGGGCATGTGTTTCCCCTCAAGTATCGAAATGGTGGGGTTT
TTAAGGAGGGCTAGTCACACTGAGGCTTCTGTGGATTTGCTAGTGTTAGC
TGGCTTGGAATCCAGTATCTGTTCTATCACCTGGTTGTTGATCCCGAGGA
TGGTTCCCTGTCCTCCATTGCCTATTTAAAGGAAGTTTGGGATTTGGAGC
CCACCATCCCCAATTGTGGTCAATAACCAAATTTTTGATCAAATTTTCCG
CCAAAAAAAAAAAAAACCTTTTGGTTGAAAGAAACTGGCCCTTTTTCCCC
TTTTTGGCCAACAAAAATGGGGGTTCCCTTTTCCAGCTTTACGGCTATTC
CCCCCAAACCTAAAAAGGGAAAAAAAATTTTTTTGGCTTTTTTGTGAAAG
GGAAAAATTGGGGAAAAAGGGAAAAAAAAAGTTTTCTTTTGAAAAAATTT
TTTTTTTATCAAAAAATTTATTAACAAGGGAGAAAAATAATTTTTGGGGG
GGCCACCCCCCGCGGGGTGGGTAGTGGTGGGGGGGACAAACCACCTTTAT
GGGTGTTTTTTTTGGGGGCCAAGTTGGCA
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