EY676433

Overview
NameEY676433
Unique NameEY676433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length979
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SALEP (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella enteritidis PT4 (strain P125109) GN=ribB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.020e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3 
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL+ LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A     +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRG 151
[Close]
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SALDC (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella dublin (strain CT_02021853) GN=ribB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.020e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3 
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL+ LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A     +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRG 151
[Close]
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SALCH (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella choleraesuis GN=ribB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.020e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3 
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL+ LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A     +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRG 151
[Close]
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SALA4 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella agona (strain SL483) GN=ribB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.020e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3 
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL+ LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A     +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRG 151
[Close]
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SHISS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella sonnei (strain Ss046) GN=ribB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3 
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151
[Close]
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SHIFL (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella flexneri GN=ribB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3 
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151
[Close]
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SHIF8 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella flexneri serotype 5b (strain 8401) GN=ribB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3 
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151
[Close]
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SHIDS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ribB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3 
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151
[Close]
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SHIBS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella boydii serotype 4 (strain Sb227) GN=ribB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3 
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151
[Close]
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SHIB3 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ribB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3 
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151
The following BLAST results are available for this feature:
BLAST of EY676433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
RIBB_SALEP6.020e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALDC6.020e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALCH6.020e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALA46.020e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHISS7.862e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHIFL7.862e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHIF87.862e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHIDS7.862e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHIBS7.862e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHIB37.862e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676433 ID=EY676433; Name=EY676433; organism=Citrus sinensis; type=EST; length=979bp
CACGCGTCCGAGGTGATCCTGATTGCCCAACTGAAGGATTCTCCTCGATT
GAGCAGGCACTCAACACATTGCGCCAAGGAAAGTTTGTGATTGTTGTGGA
GGATGAAAATGGAGATGTTGAAGGAAACCTCGTCATGGCTGCATCTCTTA
CAAGTCCTCGGCATGTGGCTTTTATGGTTAAGCATGGTTCAGGAATTGTT
TCTGTAGGCATGAAAGAAGAGGATCTTCAAAGATTGAATCTACCATTGAT
GTCACCTGAAGCTGAAAATGAAGACTCTTGTGGCCCAACTTTCACAATCA
CAGTGGATGCAAAATTTGGCACAACTACTGGGGTATCGGCTTCAGATAGG
GCAAAGACTGTTCTTGCTCTTTCATCTCCAGATTCTAAGCCAGAAAACTT
CAGGAGGCCAGGGCATGTGTTTCCCCTCAAGTATCGAAATGGTGGGGTTT
TTAAGGAGGGCTAGTCACACTGAGGCTTCTGTGGATTTGCTAGTGTTAGC
TGGCTTGGAATCCAGTATCTGTTCTATCACCTGGTTGTTGATCCCGAGGA
TGGTTCCCTGTCCTCCATTGCCTATTTAAAGGAAGTTTGGGATTTGGAGC
CCACCATCCCCAATTGTGGTCAATAACCAAATTTTTGATCAAATTTTCCG
CCAAAAAAAAAAAAAACCTTTTGGTTGAAAGAAACTGGCCCTTTTTCCCC
TTTTTGGCCAACAAAAATGGGGGTTCCCTTTTCCAGCTTTACGGCTATTC
CCCCCAAACCTAAAAAGGGAAAAAAAATTTTTTTGGCTTTTTTGTGAAAG
GGAAAAATTGGGGAAAAAGGGAAAAAAAAAGTTTTCTTTTGAAAAAATTT
TTTTTTTATCAAAAAATTTATTAACAAGGGAGAAAAATAATTTTTGGGGG
GGCCACCCCCCGCGGGGTGGGTAGTGGTGGGGGGGACAAACCACCTTTAT
GGGTGTTTTTTTTGGGGGCCAAGTTGGCA
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