EY676433

Overview
NameEY676433
Unique NameEY676433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length979
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_ECO7I (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=ribB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_ECO5E (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ribB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_ECO57 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O157:H7 GN=ribB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_ECO55 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli (strain 55989 / EAEC) GN=ribB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_ECO24 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ribB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_UNCTG (Riboflavin biosynthesis protein ribBA OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=ribBA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 59/137 (43.07%), Postives = 86/137 (62.77%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGV 449
            F+SI  A+  ++ G+ VIVV+D   + EG+L+ AA   SP  + FM K+  G++ V MK E L+ L +  M  +   +  C  +FT++VD K GTTTG+SA DR+ TV  L    +K E+F RPGH+FPL+ + GGV
Sbjct:    6 FASIGDAVKDIKVGRMVIVVDDPGRENEGDLICAAEKASPEVINFMTKYARGLICVPMKHERLKELEIENMVEKPTEKKGC--SFTVSVDYKIGTTTGISAYDRSVTVRKLIDKTAKHEDFARPGHIFPLRCKEGGV 140          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_GEOSW (Riboflavin biosynthesis protein ribBA OS=Geobacillus sp. (strain WCH70) GN=ribBA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 61/140 (43.57%), Postives = 92/140 (65.71%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNL-PLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455
            F  IE+A+  L QGK +IV +DE+ + EG+ V  A   +P  + FM+K+G G+V V + EE   +L+L P+++    N DS G  FT+++D K  TTTG+SA +R+ T+ AL  P++K  +F+RPGHVFPL  + GGV +
Sbjct:    2 FDMIEEAIYELMQGKVIIVCDDEDRENEGDFVALAEKATPEVINFMIKYGRGLVCVPITEELADKLDLAPMVN---HNTDSHGTAFTVSIDYK-STTTGISAYERSMTIQALLDPNAKASDFKRPGHVFPLVAKKGGVLR 137          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLPN (Riboflavin biosynthesis protein ribBA OS=Chlamydia pneumoniae GN=ribBA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.862e-25
Identity = 61/139 (43.88%), Postives = 87/139 (62.59%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455
            F S+E+A+  LR GKFVIVV++ + + EG+L++A    +   + F+++H +G+V   + +E L  L+LP M  +  N       FT++VDA  G TTGVSA+DR K V  L+ P SKPE+F  PGH FPL    GGV K
Sbjct:   13 FVSLERAIEDLRAGKFVIVVDEASREDEGDLIIAGEKITVEKMTFLLQHTTGVVCAALSQERLLSLDLPPMVKD--NRCRFKTPFTVSVDAAHGVTTGVSAADRTKVVQLLADPKSKPEDFISPGHFFPLASSPGGVLK 149          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_SHEWM (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=ribB PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.027e-24
Identity = 56/135 (41.48%), Postives = 93/135 (68.89%), Query Frame = 3
Query:   48 IEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVF 452
            +E AL +LRQG+ V+VV+DE+ + EG+L+ +A   +   +A +++  SGIV + + +E +++L+LP M  +  N    G  FT++++AK G TTGVSA+DR  T+ A  + ++ PE+  RPGHV+PL+ ++GGVF
Sbjct:   16 VEAALTSLRQGQGVLVVDDEDRENEGDLIYSAQSLTNEQMALLIRECSGIVCLCLTDERIKQLDLPPMVED--NSSQYGTAFTVSIEAKVGVTTGVSAADRVTTIKAAIADNAVPEDLARPGHVYPLRAQSGGVF 148          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_ESCF3 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ribB PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.027e-24
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + E+  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTIEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
The following BLAST results are available for this feature:
BLAST of EY676433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
RIBB_ECO7I7.862e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECO5E7.862e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECO577.862e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECO557.862e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECO247.862e-2541.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBBA_UNCTG7.862e-2543.07Riboflavin biosynthesis protein ribBA OS=Unculture... [more]
RIBBA_GEOSW7.862e-2543.57Riboflavin biosynthesis protein ribBA OS=Geobacill... [more]
RIBBA_CHLPN7.862e-2543.88Riboflavin biosynthesis protein ribBA OS=Chlamydia... [more]
RIBB_SHEWM1.027e-2441.483,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_ESCF31.027e-2441.133,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676433 ID=EY676433; Name=EY676433; organism=Citrus sinensis; type=EST; length=979bp
CACGCGTCCGAGGTGATCCTGATTGCCCAACTGAAGGATTCTCCTCGATT
GAGCAGGCACTCAACACATTGCGCCAAGGAAAGTTTGTGATTGTTGTGGA
GGATGAAAATGGAGATGTTGAAGGAAACCTCGTCATGGCTGCATCTCTTA
CAAGTCCTCGGCATGTGGCTTTTATGGTTAAGCATGGTTCAGGAATTGTT
TCTGTAGGCATGAAAGAAGAGGATCTTCAAAGATTGAATCTACCATTGAT
GTCACCTGAAGCTGAAAATGAAGACTCTTGTGGCCCAACTTTCACAATCA
CAGTGGATGCAAAATTTGGCACAACTACTGGGGTATCGGCTTCAGATAGG
GCAAAGACTGTTCTTGCTCTTTCATCTCCAGATTCTAAGCCAGAAAACTT
CAGGAGGCCAGGGCATGTGTTTCCCCTCAAGTATCGAAATGGTGGGGTTT
TTAAGGAGGGCTAGTCACACTGAGGCTTCTGTGGATTTGCTAGTGTTAGC
TGGCTTGGAATCCAGTATCTGTTCTATCACCTGGTTGTTGATCCCGAGGA
TGGTTCCCTGTCCTCCATTGCCTATTTAAAGGAAGTTTGGGATTTGGAGC
CCACCATCCCCAATTGTGGTCAATAACCAAATTTTTGATCAAATTTTCCG
CCAAAAAAAAAAAAAACCTTTTGGTTGAAAGAAACTGGCCCTTTTTCCCC
TTTTTGGCCAACAAAAATGGGGGTTCCCTTTTCCAGCTTTACGGCTATTC
CCCCCAAACCTAAAAAGGGAAAAAAAATTTTTTTGGCTTTTTTGTGAAAG
GGAAAAATTGGGGAAAAAGGGAAAAAAAAAGTTTTCTTTTGAAAAAATTT
TTTTTTTATCAAAAAATTTATTAACAAGGGAGAAAAATAATTTTTGGGGG
GGCCACCCCCCGCGGGGTGGGTAGTGGTGGGGGGGACAAACCACCTTTAT
GGGTGTTTTTTTTGGGGGCCAAGTTGGCA
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