EY676433

Overview
NameEY676433
Unique NameEY676433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length979
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCPA (Riboflavin biosynthesis protein ribBA OS=Mycobacterium paratuberculosis GN=ribBA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.027e-24
Identity = 62/137 (45.26%), Postives = 89/137 (64.96%), Query Frame = 3
Query:   45 SIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455
            S+E+A+  +  GK VIV++DE+ + EG+L+ AA   +P  VAFMV++ SG + V +      RL L  M   A N+D  G  +T+TVDA+ G  TG+SASDRA T+  L+ P S  E+F RPGHV PL+ ++GGV +
Sbjct:    6 SVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMY--AVNQDKHGTAYTVTVDARNGVGTGISASDRATTMRLLADPTSIAEDFTRPGHVVPLRAKDGGVLR 140          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCA1 (Riboflavin biosynthesis protein ribBA OS=Mycobacterium avium (strain 104) GN=ribBA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.027e-24
Identity = 62/137 (45.26%), Postives = 89/137 (64.96%), Query Frame = 3
Query:   45 SIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455
            S+E+A+  +  GK VIV++DE+ + EG+L+ AA   +P  VAFMV++ SG + V +      RL L  M   A N+D  G  +T+TVDA+ G  TG+SASDRA T+  L+ P S  E+F RPGHV PL+ ++GGV +
Sbjct:    6 SVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMY--AVNQDKHGTAYTVTVDARNGVGTGISASDRATTMRLLADPTSIAEDFTRPGHVVPLRAKDGGVLR 140          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_YERE8 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ribB PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.341e-24
Identity = 57/134 (42.54%), Postives = 90/134 (67.16%), Query Frame = 3
Query:   48 IEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGV 449
            +E+A++ LR G+ V+V++DE+ + EG++V AA   +   +A  ++HGSGIV + + +E  Q+L+LP+M   A N       FT+T++A  G TTGVSA+DR  T+ A  + ++KP +  RPGHVFPL+ + GGV
Sbjct:   16 VERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTVEQMALTIRHGSGIVCLCITDERRQQLDLPMMV--ANNSSQFQTAFTVTIEAAKGVTTGVSAADRLTTIRAAIADNAKPTDLNRPGHVFPLRGQPGGV 147          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_ECOUT (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli (strain UTI89 / UPEC) GN=ribB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.752e-24
Identity = 57/141 (40.43%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + ++  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITDDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_ECOL6 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O6 GN=ribB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.752e-24
Identity = 57/141 (40.43%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + ++  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITDDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_ECOK1 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O1:K1 / APEC GN=ribB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.752e-24
Identity = 57/141 (40.43%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + ++  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITDDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_ECO81 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O81 (strain ED1a) GN=ribB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.752e-24
Identity = 57/141 (40.43%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + ++  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITDDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_ECO45 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=ribB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.752e-24
Identity = 57/141 (40.43%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + ++  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITDDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBB_ECO27 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=ribB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.752e-24
Identity = 57/141 (40.43%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG 461
            F  +E AL  LR+G+ V+V++DE+ + EG+++  A   +   +A  ++HGSGIV + + ++  ++L+LP+M     N  + G  FT+T++A  G TTGVSA+DR  TV A  +  +KP +  RPGHVFPL+ + GGV   G
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITDDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRG 151          
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_BACCN (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=ribBA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.752e-24
Identity = 61/140 (43.57%), Postives = 89/140 (63.57%), Query Frame = 3
Query:   39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNL-PLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455
            F  IE+AL  L+QGK +IV +D+N + EG+ +  A   +P  + FM+ HG G+V V + E   +RL L P++S   +N DS    FT+++D    TTTG+SA +RA TV  L +P SK  +F RPGH+FPL  ++GGV +
Sbjct:    2 FHRIEEALEDLKQGKVIIVCDDKNRENEGDFLALAEYITPETINFMITHGRGLVCVPLPEHYAKRLQLEPMVS---QNTDSHHTAFTVSID-HISTTTGISAHERATTVRELLNPSSKGSDFNRPGHIFPLIAKDGGVLR 137          
The following BLAST results are available for this feature:
BLAST of EY676433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
RIBBA_MYCPA1.027e-2445.26Riboflavin biosynthesis protein ribBA OS=Mycobacte... [more]
RIBBA_MYCA11.027e-2445.26Riboflavin biosynthesis protein ribBA OS=Mycobacte... [more]
RIBB_YERE81.341e-2442.543,4-dihydroxy-2-butanone 4-phosphate synthase OS=Y... [more]
RIBB_ECOUT1.752e-2440.433,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECOL61.752e-2440.433,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECOK11.752e-2440.433,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECO811.752e-2440.433,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECO451.752e-2440.433,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECO271.752e-2440.433,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBBA_BACCN1.752e-2443.57Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676433 ID=EY676433; Name=EY676433; organism=Citrus sinensis; type=EST; length=979bp
CACGCGTCCGAGGTGATCCTGATTGCCCAACTGAAGGATTCTCCTCGATT
GAGCAGGCACTCAACACATTGCGCCAAGGAAAGTTTGTGATTGTTGTGGA
GGATGAAAATGGAGATGTTGAAGGAAACCTCGTCATGGCTGCATCTCTTA
CAAGTCCTCGGCATGTGGCTTTTATGGTTAAGCATGGTTCAGGAATTGTT
TCTGTAGGCATGAAAGAAGAGGATCTTCAAAGATTGAATCTACCATTGAT
GTCACCTGAAGCTGAAAATGAAGACTCTTGTGGCCCAACTTTCACAATCA
CAGTGGATGCAAAATTTGGCACAACTACTGGGGTATCGGCTTCAGATAGG
GCAAAGACTGTTCTTGCTCTTTCATCTCCAGATTCTAAGCCAGAAAACTT
CAGGAGGCCAGGGCATGTGTTTCCCCTCAAGTATCGAAATGGTGGGGTTT
TTAAGGAGGGCTAGTCACACTGAGGCTTCTGTGGATTTGCTAGTGTTAGC
TGGCTTGGAATCCAGTATCTGTTCTATCACCTGGTTGTTGATCCCGAGGA
TGGTTCCCTGTCCTCCATTGCCTATTTAAAGGAAGTTTGGGATTTGGAGC
CCACCATCCCCAATTGTGGTCAATAACCAAATTTTTGATCAAATTTTCCG
CCAAAAAAAAAAAAAACCTTTTGGTTGAAAGAAACTGGCCCTTTTTCCCC
TTTTTGGCCAACAAAAATGGGGGTTCCCTTTTCCAGCTTTACGGCTATTC
CCCCCAAACCTAAAAAGGGAAAAAAAATTTTTTTGGCTTTTTTGTGAAAG
GGAAAAATTGGGGAAAAAGGGAAAAAAAAAGTTTTCTTTTGAAAAAATTT
TTTTTTTATCAAAAAATTTATTAACAAGGGAGAAAAATAATTTTTGGGGG
GGCCACCCCCCGCGGGGTGGGTAGTGGTGGGGGGGACAAACCACCTTTAT
GGGTGTTTTTTTTGGGGGCCAAGTTGGCA
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