EY676432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METKA (30S ribosomal protein S4P OS=Methanopyrus kandleri GN=rps4p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.179e-19 Identity = 47/104 (45.19%), Postives = 68/104 (65.38%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNK--LDYVLALTVENFLERRLQT 401 K ++ PR P+E ERL+ E +L+ +YGLR K+ELWR Q L R R A++L+ + +R E EAL R+++ G L++ + LD +L LTVE+ LERRLQT Sbjct: 9 KKYETPRHPWEAERLEYERKLMRKYGLRRKKELWRHQTQLKRWRERAKELMARTDPEAQR--EREALFRKLYDLGILDKKPEEATLDDILRLTVEDVLERRLQT 110 HSP 2 Score: 32.7278 bits (73), Expect = 3.179e-19 Identity = 13/37 (35.14%), Postives = 24/37 (64.86%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCI 513 +V++ G+A + AR L+ RHI +G ++V PS+ + Sbjct: 111 IVYRKGLAKTPLQARQLVVHRHIAIGDRIVTVPSYLV 147
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_IGNH4 (30S ribosomal protein S4P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps4p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.198e-19 Identity = 48/102 (47.06%), Postives = 67/102 (65.69%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 K + P P+ KERL E++L+GEYGLR KRE+W L R R+ AR+LL L + + E +ALL+R++ G ++E+ LD VL+LTV + LERRLQT Sbjct: 9 KKWSPPGHPWVKERLIEEMKLMGEYGLRNKREIWIAAAMLRRYRHRARELLALPAEVREK--EEKALLKRLYDLGLVDENAT-LDDVLSLTVRDLLERRLQT 107 HSP 2 Score: 33.8834 bits (76), Expect = 3.198e-19 Identity = 13/37 (35.14%), Postives = 23/37 (62.16%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCI 513 +V+K G+A S++HAR L+ HI + + V P + + Sbjct: 108 VVYKKGLAKSIYHARQLVTHGHIAINGRRVTSPGYIV 144
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS9_ENCCU (40S ribosomal protein S9 OS=Encephalitozoon cuniculi GN=RPS9 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.382e-19 Identity = 49/110 (44.55%), Postives = 65/110 (59.09%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRI-FEGEALLRRMHRYGFL--------EESQNKLDYVLALTVENFLERRLQ 398 K PR P+EKERL E +LVG YGL+ K ELW ++ ++ + AR LLT NP I G +LLRR+ +YG L +E N L+ VL LT+ ++LERRLQ Sbjct: 8 KRASTPRDPFEKERLIREAQLVGVYGLKNKHELWVMEKIFAKDKERARILLT--STNPEDIPINGRSLLRRLMKYGILGGIDLCDKQEVVNGLNKVLDLTINHYLERRLQ 115 HSP 2 Score: 38.5058 bits (88), Expect = 5.382e-19 Identity = 18/36 (50.00%), Postives = 25/36 (69.44%), Query Frame = 1 Query: 406 VFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCI 513 VF +G+A SVHHAR+LI R I + Q+V+ P F + Sbjct: 118 VFAAGLAKSVHHARLLIGGRCISIKDQIVDVPGFMV 153
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_THEPD (30S ribosomal protein S4P OS=Thermofilum pendens (strain Hrk 5) GN=rps4p PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.417e-18 Identity = 48/102 (47.06%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 K ++ P P+ KE L E++LVGEYGLR KRELW + L IR AR LL L + RI + L+ R+++ G L LD VL+LTV + LERRLQT Sbjct: 9 KKWQGPSHPWRKETLLEEMQLVGEYGLRNKRELWIAKSLLREIRAKARKLLALPAE--ERIKLEKPLVSRLYKMGLLPSEDASLDDVLSLTVRDVLERRLQT 108 HSP 2 Score: 32.3426 bits (72), Expect = 4.417e-18 Identity = 13/37 (35.14%), Postives = 22/37 (59.46%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCI 513 +V++ G+A ++ HAR LI HI V + V P + + Sbjct: 109 IVYRKGLATTIRHARQLITHGHIAVNSRRVRSPGYLV 145
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_HYPBU (30S ribosomal protein S4P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps4p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.462e-18 Identity = 50/102 (49.02%), Postives = 64/102 (62.75%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 K + P+ P+ KERL EL LVG YGLR KRELW+++ R+ AR LL L + + E +ALL R++ G L E+ LD VL LT E+FLERRLQT Sbjct: 9 KKWMGPKHPWIKERLVRELELVGRYGLRNKRELWKLETLARYFRHRARSLLALPPEVREK--EEKALLARLNELGVLPENAT-LDDVLNLTAEHFLERRLQT 107 HSP 2 Score: 30.4166 bits (67), Expect = 7.462e-18 Identity = 13/46 (28.26%), Postives = 26/46 (56.52%), Query Frame = 1 Query: 379 FLSVVSRPLVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCIE 516 FL + +V+K G+A +++ AR LI HI + + + P + ++ Sbjct: 100 FLERRLQTIVYKKGLARTIYEARQLIVHGHIAIAGRKIRSPGYLVK 145
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METJA (30S ribosomal protein S4P OS=Methanocaldococcus jannaschii GN=rps4p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.258e-17 Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 3 Query: 84 RNYGKTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 R + KT++ P P+ KER++ E L +YGLR KRE+W+ + L + R AR L++ ++ + E L + +YG L+ LD VL+LTVE+ LERRLQT Sbjct: 6 RRFKKTYETPNHPWIKERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLIS--DRTEQGAKEAVQLFNVLKKYGILKIENPTLDDVLSLTVEDILERRLQT 109 HSP 2 Score: 31.9574 bits (71), Expect = 1.258e-17 Identity = 16/39 (41.03%), Postives = 23/39 (58.97%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCIEV 519 LVF+ G+A + AR LI HI V ++V PS+ + V Sbjct: 110 LVFRKGLARTPRQARQLIVHGHIAVNGRVVTAPSYMVTV 148
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METTP (30S ribosomal protein S4P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps4p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.259e-17 Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRI-FEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 KT+ +PR+P+E +R+ E+ L+ YGLR KRELW+ + L + R R LL + R E A++ R+ R+G L++ + LD +L+L + + LERRLQT Sbjct: 9 KTYDRPRKPWEADRMANEVELIKTYGLRNKRELWKAESILRKYRRVGRMLLASKARGEARADIEAAAVINRLSRFGILKDGAD-LDAILSLKITDILERRLQT 110 HSP 2 Score: 31.9574 bits (71), Expect = 1.259e-17 Identity = 13/37 (35.14%), Postives = 22/37 (59.46%), Query Frame = 1 Query: 406 VFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCIE 516 V++ G+A ++ AR I HI+V Q V PS+ ++ Sbjct: 112 VYRQGLANTIRQARQFITHGHIQVAGQRVTVPSYLVK 148
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_PICTO (30S ribosomal protein S4P OS=Picrophilus torridus GN=rps4p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.597e-17 Identity = 44/103 (42.72%), Postives = 64/103 (62.14%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDL-LTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 K + PR P+EK+R+D E +L+ +YGL+ KRELWR Q L+ R AR L L +P I + + L+ ++ R L E+ LD VL+L +E+ LERRL+T Sbjct: 9 KKYSTPRHPWEKDRIDAERQLLIKYGLKNKRELWRAQTILTNFRTQARTLQAKLRYNDPLAIKQFQLLIGKLSRLNLLGENAT-LDDVLSLNIEDILERRLET 110 HSP 2 Score: 32.7278 bits (73), Expect = 3.597e-17 Identity = 15/38 (39.47%), Postives = 23/38 (60.53%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCIE 516 LV+K +A ++ AR I HI+V ++V PSF +E Sbjct: 111 LVYKKNLALTMKQARQFITHGHIKVNDRVVTIPSFMVE 148
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_ARCFU (30S ribosomal protein S4P OS=Archaeoglobus fulgidus GN=rps4p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 6.101e-17 Identity = 44/110 (40.00%), Postives = 69/110 (62.73%), Query Frame = 3 Query: 84 RNYGKTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLT----LDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 + + K + P P++K RL+ E++LV +YGLR KRELWR Q L + R ARDLL ++ + + +++++++ G L E+ LD +L L+VE+FLERRLQT Sbjct: 5 KRHRKKYTTPTHPWDKARLEKEMQLVIKYGLRNKRELWRFQNILRKYRRVARDLLAEIGLPGKEGEIAKAKAQTVIKKLNKMGILPENAT-LDDILNLSVEDFLERRLQT 113 HSP 2 Score: 30.0314 bits (66), Expect = 6.101e-17 Identity = 15/45 (33.33%), Postives = 24/45 (53.33%), Query Frame = 1 Query: 379 FLSVVSRPLVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCI 513 FL + +V++ G+A ++ AR I HI V + V PSF + Sbjct: 106 FLERRLQTMVYRQGLARTIKQARQFITHGHIAVDGRRVTSPSFIV 150
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_THEAC (30S ribosomal protein S4P OS=Thermoplasma acidophilum GN=rps4p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.464e-17 Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDL---LTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 K + PR P+EKER+D E ++V +YGL+ K+E+WR + LS IR+ ARDL L ++ N ++ + E +++R++RY L E+ LD VL+LTVEN L+RRLQT Sbjct: 9 KKYSTPRHPWEKERIDEENKIVVKYGLKNKKEIWRSEALLSSIRSQARDLRARLRTNDVNAQK--QLERMIKRLNRYKLLSENAT-LDDVLSLTVENILDRRLQT 110 The following BLAST results are available for this feature:
BLAST of EY676432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >EY676432 ID=EY676432; Name=EY676432; organism=Citrus sinensis; type=EST; length=946bpback to top |