EY676432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METB6 (30S ribosomal protein S4P OS=Methanoregula boonei (strain 6A8) GN=rps4p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 9.124e-15 Identity = 49/105 (46.67%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTL-DEKNPRRIFEGE--ALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 K+++ P+RP+EK R++ E RLV EYGLR KRE+W+ Q L + R AAR+LL L + +FE + L+ M R G L + +D VLAL V LERRLQT Sbjct: 9 KSYQTPKRPFEKTRIEEETRLVIEYGLRNKREVWKAQSHLRKYRKAARELLALMSSATNQTVFEAKKSELISHMQRAGLLGPDAD-IDNVLALKVPAQLERRLQT 112
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_META3 (30S ribosomal protein S4P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps4p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.533e-14 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 84 RNYGKTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 R KT+ P P+ ER+ E L +YGL K+E+W+++ L R AR L++ + + + E L ++RYG L + LD VL+L +E+ LERRLQT Sbjct: 5 RRLSKTYDTPNHPWIGERIKQERELSNKYGLSNKKEIWKMETRLRTFRRQARKLIS--DTSAQGEKEAVQLFGILNRYGILLKEDATLDDVLSLNLESILERRLQT 108 HSP 2 Score: 31.9574 bits (71), Expect = 2.533e-14 Identity = 16/59 (27.12%), Postives = 29/59 (49.15%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCIEVCFPKPL*ILPSQFLSGRGAP 579 LVF+ G+A + AR I HI V + +N PS+ + + + +P+ ++ P Sbjct: 109 LVFRKGLANTPKQARQFIVHGHIAVNGKKINAPSYLVPLVEEDAISYMPNSPMASESHP 167
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METM7 (30S ribosomal protein S4P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps4p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-14 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 3 Query: 84 RNYGKTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 R GK + P P+ ER+ E + +YGL K+ELW+++ L R AR L++ + + E L + RY L E + LD+VL+L +E+ LERRLQT Sbjct: 5 RRLGKKYDTPNHPWIGERIQSEREISQKYGLVNKKELWKMETQLRNYRRQARKLIS--DTTTQGGKEAVQLFNVLKRYAILVEQEPTLDHVLSLNIESILERRLQT 108 HSP 2 Score: 30.4166 bits (67), Expect = 3.292e-14 Identity = 16/59 (27.12%), Postives = 28/59 (47.46%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCIEVCFPKPL*ILPSQFLSGRGAP 579 +V+K G+A + AR I HI V + V PS+ + V + +P+ ++ P Sbjct: 109 MVYKKGLAKTAKQARQFIVHGHIAVNGKRVTSPSYLVSVAENDAIEYVPNSPMASENHP 167
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METVS (30S ribosomal protein S4P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps4p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.277e-14 Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 3 Query: 84 RNYGKTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 R GK + P P+ ER+ E + +YGL K+ELW+++ L R AR L++ + + E L + RY L E + LD++L+L +E+ LERRLQT Sbjct: 5 RRLGKKYDTPNHPWIGERIQKEREISHKYGLVNKKELWKMETQLRNYRRQARKLIS--DTTTQGGKEAVQLFNVLKRYAILVEQEPTLDHILSLNIESILERRLQT 108 HSP 2 Score: 30.4166 bits (67), Expect = 4.277e-14 Identity = 15/39 (38.46%), Postives = 22/39 (56.41%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCIEV 519 LV++ G+A + AR LI HI V + V PS+ + V Sbjct: 109 LVYRKGLAKTAKQARQLIVHGHIAVNGRRVTSPSYLVSV 147
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_HALMA (30S ribosomal protein S4P OS=Haloarcula marismortui GN=rps4p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.724e-14 Identity = 48/115 (41.74%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTPCVQEWHGWVGSP 440 K ++ P P++ ER+ E L+G YGL+ K ELWR Q L R AR LL ++ E E L R+ RYG L E Q++LD VL+L V + LERRLQT ++ G+ +P Sbjct: 8 KFYETPNHPFQGERIADEANLIGRYGLKNKEELWRAQSELRGYRREARKLLGSAGEHET---ESEEFLARLKRYGILNE-QDQLDDVLSLDVTDVLERRLQTVVYRK--GYANTP 116
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METPE (30S ribosomal protein S4P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps4p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.009e-13 Identity = 52/128 (40.62%), Postives = 72/128 (56.25%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTL---DEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTPCVQEWHGWVGSPCSSAHQAKAH 470 K ++ P+RP+EK+R++ E R+V EYGLR KRE+WR Q L R R AAR+LL + + E LL ++R G L + D VL+L ++ LERRLQT ++ G SP A Q H Sbjct: 9 KGYEAPKRPFEKQRIEDETRIVIEYGLRNKREVWRAQSVLRRYRKAARELLAFMSQSSDEQQIATKKEHLLGHLNRIGLLGPDADIGD-VLSLKIQQPLERRLQTMVYRQ--GLARSP-KQARQMVTH 132
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_HALSA (30S ribosomal protein S4P OS=Halobacterium salinarium GN=rps4p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.223e-13 Identity = 44/107 (41.12%), Postives = 57/107 (53.27%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTPCVQE 416 K ++ P PY+ ER+ E L+ YGL+ K ELWR Q L R AR LL GE + R+ R G L E + +LD VL+L V + LERRLQT +E Sbjct: 9 KFYETPNHPYQGERIAEESDLLSRYGLKNKEELWRAQSELRDYRREARRLL-----GQTGTVSGEEFVARLQRIGILSE-EERLDDVLSLEVTDVLERRLQTVVYRE 109 HSP 2 Score: 26.9498 bits (58), Expect = 1.223e-13 Identity = 11/39 (28.21%), Postives = 21/39 (53.85%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCIEV 519 +V++ G+A ++ AR + H+ V V PS+ + V Sbjct: 105 VVYREGLANTMGQARQFVSHGHVTVDGSRVTEPSYTVPV 143
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_HALS3 (30S ribosomal protein S4P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps4p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.223e-13 Identity = 44/107 (41.12%), Postives = 57/107 (53.27%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTPCVQE 416 K ++ P PY+ ER+ E L+ YGL+ K ELWR Q L R AR LL GE + R+ R G L E + +LD VL+L V + LERRLQT +E Sbjct: 9 KFYETPNHPYQGERIAEESDLLSRYGLKNKEELWRAQSELRDYRREARRLL-----GQTGTVSGEEFVARLQRIGILSE-EERLDDVLSLEVTDVLERRLQTVVYRE 109 HSP 2 Score: 26.9498 bits (58), Expect = 1.223e-13 Identity = 11/39 (28.21%), Postives = 21/39 (53.85%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCIEV 519 +V++ G+A ++ AR + H+ V V PS+ + V Sbjct: 105 VVYREGLANTMGQARQFVSHGHVTVDGSRVTEPSYTVPV 143
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METHJ (30S ribosomal protein S4P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps4p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.721e-13 Identity = 48/118 (40.68%), Postives = 71/118 (60.17%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLD---EKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTPCVQEWHGWVGSP 440 K ++ P+RP+E R++ E RLV EYGLR KRE+W + AL + R AAR+++ L + R + + L+ + R G L E+ + +D VLAL VE L+RRLQT + G+ SP Sbjct: 9 KQYQTPKRPFELSRIEEETRLVIEYGLRNKREVWIAKGALRKYRKAAREIIALQSTGSEQARVERKKDELIGSLQRSGMLSENAD-IDDVLALKVEQQLDRRLQTQVYR--RGFARSP 123
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METBF (30S ribosomal protein S4P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps4p PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.247e-13 Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEG------EALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 K+F+ PR P+++ R+ E++LV YGLR KRE+W+ L R+ AR LL + R EG E +L ++ RYG + +S +D +L+L EN LERRLQT Sbjct: 9 KSFETPRHPWQEARMASEVQLVKAYGLRNKREVWKAASTLRMYRSEARRLLASAANSQERGLEGHQKTQSEEILAKLIRYGII-KSDADIDDILSLKTENILERRLQT 115 The following BLAST results are available for this feature:
BLAST of EY676432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >EY676432 ID=EY676432; Name=EY676432; organism=Citrus sinensis; type=EST; length=946bpback to top |