EY676432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METMP (30S ribosomal protein S4P OS=Methanococcus maripaludis GN=rps4p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.673e-13 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 3 Query: 84 RNYGKTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 R GK + P P+ ER+ E + +YGL K+ELW+++ L R AR L++ + + E L + RY L E + LD+VL+L +E+ LERRLQT Sbjct: 5 RRLGKKYDTPNHPWIGERIQKEKEISQKYGLVNKKELWKMETQLRNYRRQARKLIS--DTTTQGGKEAVQLFNVLKRYAILIEEEPTLDHVLSLNIESILERRLQT 108 HSP 2 Score: 27.7202 bits (60), Expect = 2.673e-13 Identity = 14/39 (35.90%), Postives = 21/39 (53.85%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCIEV 519 +VF+ G+A + AR I HI V + V P++ I V Sbjct: 109 IVFRKGLAKTPKQARQFIVHGHIAVNGKRVTAPAYLISV 147
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_HALWD (30S ribosomal protein S4P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps4p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.866e-13 Identity = 43/104 (41.35%), Postives = 58/104 (55.77%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFE--GEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 K ++ P PY+ ER+ E L+G YGL+ K ELWR Q L R AR L+ + + + E GE L R+ RYG L + + + VL L V + LERRLQT Sbjct: 8 KRYETPNHPYQGERIAQEGDLLGRYGLKNKEELWRTQSELREYRREARRLIG-EAQGDVSVAEALGEEFLDRLRRYGIL-SADDDISKVLGLDVSDILERRLQT 109 HSP 2 Score: 25.7942 bits (55), Expect = 5.866e-13 Identity = 13/38 (34.21%), Postives = 19/38 (50.00%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCIE 516 +V++ G+A + AR I HI V V PS +E Sbjct: 110 IVYRQGLASTPKQARQFIVHEHITVNGARVTRPSKMVE 147
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METMJ (30S ribosomal protein S4P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps4p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.539e-13 Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDE---KNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTPCVQEWHGWVGSP 440 K + P+R +EK RL+ E RL+ +YGLR KRELW+ Q L + R AR+L+ L + + + L+ ++RYG + E+ + D VLAL VE L+RRLQT ++ G+ SP Sbjct: 9 KQYATPKRRFEKTRLEDEKRLIIDYGLRNKRELWKAQSVLRKYRAGARELVALRSGGLSTEDYLKKRDQLVNHLYRYGLVGENADVGD-VLALKVEQQLDRRLQTLVLR--RGFARSP 123
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_CENSY (30S ribosomal protein S4P OS=Cenarchaeum symbiosum GN=rps4p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.115e-12 Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 + ++KP+RP+ + ELR +G +GLR KRELW+ LSR+RN AR LL L ++ R + LLR + R G + + + LD VL L V + L RRLQT Sbjct: 9 RMWRKPKRPFNYDLKMEELRTLGTFGLRTKRELWKAHTELSRVRNQARSLLALGQEVRER--KEPVLLRSLARIGLVGKDAS-LDDVLNLQVNDLLGRRLQT 107
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_NANEQ (30S ribosomal protein S4P OS=Nanoarchaeum equitans GN=rps4p PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.038e-11 Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTPCVQE 416 + ++ P P++K+RL E RL+ EYGL+ KRELW + + R AR L E E L ++ + G L E+ +LD VL LTV++ LERRLQT V++ Sbjct: 6 RKWEGPSHPWQKQRLIIEKRLMKEYGLKNKRELWIAETIARKWRAYARYLNAKQAAGQDISEEKERFLTKLKKLGVLSENA-ELDDVLDLTVKDVLERRLQTMLVRK 111 HSP 2 Score: 26.5646 bits (57), Expect = 1.038e-11 Identity = 11/38 (28.95%), Postives = 23/38 (60.53%), Query Frame = 1 Query: 403 LVFKSGMAGSVHHARVLIRQRHIRVGRQLVNFPSFCIE 516 ++ + G+A ++ AR I HI V ++V+ PS+ ++ Sbjct: 107 MLVRKGLAKTMKQARQFIVHGHIMVNGEVVDAPSYLVK 144
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_SULSO (30S ribosomal protein S4P OS=Sulfolobus solfataricus GN=rps4p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 K ++ P P+ KER+ E L+G+YGLR KRE+W Q + + R+ AR LL L R + L+ ++ + G L++ +D +L+LT ++ LERRLQT Sbjct: 9 KKWETPGHPWIKERIGYEQELLGKYGLRNKREIWIAQSIIRKFRHQARSLLALPP--AERAVREKQLVGKLLKMGLLKKETATVDDILSLTEQDLLERRLQT 108
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_PYRAR (30S ribosomal protein S4P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps4p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 42/100 (42.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 108 KPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLL--TLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 KP++ + K+ L EL+L+GEYGLR KRELW + L I AR LL T +E+ P + ++++ GF+E+ LD +L+L V LERRLQT Sbjct: 15 KPKKIWNKQLLLEELQLMGEYGLRNKRELWLARARLKWITRRARSLLSMTAEERAPLEM----PFKEKLYKAGFIEDPNVPLDRILSLDVRAILERRLQT 110
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_PYRAE (30S ribosomal protein S4P OS=Pyrobaculum aerophilum GN=rps4p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 3 Query: 108 KPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLL--TLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 KP++ + K+ L EL+L+GEYGLR K+ELW + L I AR LL T +E+ P + ++++ GF+E+ +LD +L+L V LERRLQT Sbjct: 15 KPKKIWNKQLLLEELQLMGEYGLRNKKELWLARARLKWITRRARSLLSMTAEERAPLEM----PFKEKLYKMGFIEDPNVQLDRILSLDVRAILERRLQT 110
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METM5 (30S ribosomal protein S4P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps4p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 40/106 (37.74%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 84 RNYGKTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 R GK + P P+ ER+ E + +YGL K+ELW+++ L R AR L++ + + E L + RY L ES+ LD+VL+L +E+ LERRLQT Sbjct: 5 RRLGKKYDTPNHPWIGERIQSEKEISQKYGLVNKKELWKMETQLRNYRRQARKLIS--DTTTQGGKEAVQLFNVLKRYAILVESEPTLDHVLSLNIESILERRLQT 108
BLAST of EY676432 vs. ExPASy Swiss-Prot
Match: RS4_METAC (30S ribosomal protein S4P OS=Methanosarcina acetivorans GN=rps4p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 40/108 (37.04%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 96 KTFKKPRRPYEKERLDPELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEG------EALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQT 401 K+++ P+ P+++ R+ E++LV YGLR K+E+W+ L R+ AR LL EG E +L ++ RYG ++ N +D +L+L EN LERRLQT Sbjct: 9 KSYETPKHPWQEARMATEVQLVKAYGLRNKKEVWKAASMLRMYRSEARKLLAHVASGQEGGLEGHYRTQSEEILSKLIRYGIIKSDAN-IDDILSLKTENILERRLQT 115 The following BLAST results are available for this feature:
BLAST of EY676432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >EY676432 ID=EY676432; Name=EY676432; organism=Citrus sinensis; type=EST; length=946bpback to top |