EY676196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP_SINAL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba GN=PSBP PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 2.220e-37 Identity = 96/193 (49.74%), Postives = 126/193 (65.28%), Query Frame = 2 Query: 50 MASTQCFLHHHALSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGGGSN 601 MA + CFLH AL+++ AR+S SSQR+VS K +VC+AQ+ E+D S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPK NTDF Y+GDGF++ +P+KWNP PG + LR+ + +KSI DYGSP+E +SQ+ ++ GK+ G+T+ GG N Sbjct: 1 MAYSACFLHQSALASSTARSSPSSSSQRYVSISK---LVCKAQQ--THEEDNSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPG------QVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLL--GKQAYF-GETASEGGFDN 179
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP_NARPS (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus GN=PSBP PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.394e-31 Identity = 89/197 (45.18%), Postives = 113/197 (57.36%), Query Frame = 2 Query: 50 MASTQCFLHHHA-------LSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGG 592 MAST CFLHHHA LS T + T+ Q H + ++ + C + A+ +SRRLALT+LIG AA+GS+VS ADAAYGESANVFGKPKTNTDF GDGFK+ IPSKWNP PG + LR+ + +KSI DYGSP++ +SQ+ ++ GK+ GKT GG Sbjct: 1 MASTACFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDAL-------LSRRLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNPSKEVEFPG------QVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLL--GKQAYF-GKTISEGG 181
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP_BRAJU (Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) OS=Brassica juncea GN=PSBP PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.990e-30 Identity = 76/145 (52.41%), Postives = 95/145 (65.52%), Query Frame = 2 Query: 185 EDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGGGSN 601 EDD S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDF NGDGF++ +P+KWNP PG + LR+ + +KSI DYGSP+E +SQ+ ++ GK+ G+T+ GG N Sbjct: 1 EDDTSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQVQVPAKWNPSREVEYPG------QVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLL--GKQAYF-GETACEGGFDN 136
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP_WHEAT (Oxygen-evolving enhancer protein 2, chloroplastic OS=Triticum aestivum GN=PSBP PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.226e-29 Identity = 83/185 (44.86%), Postives = 109/185 (58.92%), Query Frame = 2 Query: 50 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQEDDGSAV-SRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGII---SWGKKTKIPG 571 MAST CFLH + AR ++S R + TQ+ VC+AQK D + V SRR AL++L GAAA+ KVSPA AAYGE+ANVFGK K NTDF+ Y+G+GFKL IP+KWNP PG + LR+ + +K+I DYGSP+E +SQ+ ++ S+G KT G Sbjct: 1 MASTSCFLHQ-----STARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAALSLLAGAAAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPG------QVLRYEDNFDATSNLSVIINPTTKKTITDYGSPEEFLSQVGFLLGQQSYGGKTDSEG 174
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP_CHLRE (Oxygen-evolving enhancer protein 2, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBP PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.322e-15 Identity = 52/120 (43.33%), Postives = 66/120 (55.00%), Query Frame = 2 Query: 50 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPG 409 MA+ C + A + P +S+R + +V RA GS VSRR AL GAAA+ S SPA+AAYG+SANVFGK + F+PY GDGF L +P+KWNP PG Sbjct: 1 MATALC---NKAFAAAPVARPASRR-------SAVVVRAS--------GSDVSRRAALAGFAGAAALVSS-SPANAAYGDSANVFGKVTNKSGFVPYAGDGFALLLPAKWNPSKENDFPG 101 The following BLAST results are available for this feature:
BLAST of EY676196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY676196 ID=EY676196; Name=EY676196; organism=Citrus sinensis; type=EST; length=941bpback to top |