EY676030

Overview
NameEY676030
Unique NameEY676030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.539e-13
Identity = 37/75 (49.33%), Postives = 44/75 (58.67%), Query Frame = 2
Query:  299 TDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPPKS 523
            T +E G F L +HF E YP+KPP  KF    FHPNVY +G +CL IL   N W P   V  IL  IQ+LL  P +
Sbjct:   46 TPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDIL--QNRWSPTYDVAAILTSIQSLLNDPNT 118          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.539e-13
Identity = 38/73 (52.05%), Postives = 42/73 (57.53%), Query Frame = 2
Query:  299 TDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            T +E G F L L F E YP+KPP  KF    FHPNVY SG +CL IL   N W P   V  IL  IQ+LL  P
Sbjct:   46 TPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDIL--QNRWSPTYDVSSILTSIQSLLNDP 116          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.539e-13
Identity = 37/73 (50.68%), Postives = 42/73 (57.53%), Query Frame = 2
Query:  299 TDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            T +E G F L L F EDYP+KPP  KF    FHPNVY +G +CL IL   N W P   V  IL  IQ+L   P
Sbjct:   46 TPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDIL--QNRWTPTYDVASILTSIQSLFNDP 116          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.539e-13
Identity = 37/75 (49.33%), Postives = 44/75 (58.67%), Query Frame = 2
Query:  299 TDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPPKS 523
            T +E G F L +HF E YP+KPP  KF    FHPNVY +G +CL IL   N W P   V  IL  IQ+LL  P +
Sbjct:   46 TPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDIL--QNRWSPTYDVAAILTSIQSLLNDPNT 118          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13
Identity = 37/73 (50.68%), Postives = 43/73 (58.90%), Query Frame = 2
Query:  299 TDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            T +E G F L L F E YP+KPP+ KF    FHPNVY SG +CL IL   N W P   V  IL  +Q+LL  P
Sbjct:   46 TPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDIL--QNRWSPTYDVSSILTSVQSLLNDP 116          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13
Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 2
Query:  305 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            + GG F +T+HF  DYP KPPK  F    FHPNV  +G++CL IL E   W PA+T+ ++L+ I +LL  P
Sbjct:   45 YSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.115e-12
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 2
Query:  305 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            + GG F +T+HF  DYP KPPK  F    FHPN+  +G++CL IL E   W PA+T+ ++L+ I +LL  P
Sbjct:   45 YSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.115e-12
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 2
Query:  305 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            + GG F +T+HF  DYP KPPK  F    FHPN+  +G++CL IL E   W PA+T+ ++L+ I +LL  P
Sbjct:   45 YSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.457e-12
Identity = 36/75 (48.00%), Postives = 43/75 (57.33%), Query Frame = 2
Query:  299 TDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPPKS 523
            T +E G F + L F E YP+KPP  KF    FHPNVY SG +CL IL   N W P   V  IL  +Q+LL  P +
Sbjct:   46 TPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDIL--QNRWSPTYDVAAILTSVQSLLNDPNT 118          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.457e-12
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 2
Query:  305 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            + GG F +T+HF  DYP KPPK  F    FHPN+  +G++CL IL E   W PA+T+ ++L+ I +LL  P
Sbjct:   45 YAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113          
The following BLAST results are available for this feature:
BLAST of EY676030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
UBC2_EMENI6.539e-1349.33Ubiquitin-conjugating enzyme E2 2 OS=Emericella ni... [more]
UBC2_DEBHA6.539e-1352.05Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces ... [more]
UBC2_CANGA6.539e-1350.68Ubiquitin-conjugating enzyme E2 2 OS=Candida glabr... [more]
UBC2_ASPFU6.539e-1349.33Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]
UBC2_CANAL8.540e-1350.68Ubiquitin-conjugating enzyme E2 2 OS=Candida albic... [more]
UBC28_ARATH8.540e-1347.89Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC9_ARATH1.115e-1246.48SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC8_ARATH1.115e-1246.48Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC2_YARLI1.457e-1248.00Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipo... [more]
UBC10_ARATH1.457e-1246.48Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-017-H04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676030 ID=EY676030; Name=EY676030; organism=Citrus sinensis; type=EST; length=944bp
CCACGCGTCCGCCATTTTCCTCACCTTACAATATGTTTCTGCTTCATCTT
TGTTATGTCTATGTTTATGATGATACGGCTTTGTTTATGCTACCTTTTTT
TTTTTTTTTTCGTTATAGATATGTTGTCAATAACTTAGCATTGTCATTGA
TTTGATGATGAATAGATAGATGGAACAAACACACACACACACACACACAA
AATCTATATGTATATATAAATTAATAATGAATATACTAGTTCTTTCTGGG
GAAGATTACAAATTTGTTAAGTAATTTCTGATAATGTTATGCTTCTAGAC
TGATTGGGAGGGTGGTTTCTTCCCACTCACTCTCCACTTCAGCGAAGATT
ACCCTAGCAAGCCACCAAAGTGCAAGTTTCCGCAAGGATTTTTCCACCCT
AATGTCTATCCATCTGGAACTGTTTGTCTATCAATCCTCAATGAGGACAA
TGGGTGGAGACCAGCCATCACAGTGAAGCAAATTCTTGTCCGTATCCAAA
ACTTGTTGGAACCACCCAAATCCTGCAAATCCTGCACAAACAAAAAGGTT
ATCCTCCCCTTCTTTCAGGAAGGCGGCAAAATAACAAAAAAAAAATTCGG
GCACCAAGCCAAAGCAATACCCTGGCACTCCTCAAAATTTTTGGTTGGGG
TTTTTTTATGGGACTTTTATTAAAACCCCTGGGGAAATGGGAGAAATGGG
CTTTTTGGAAAAAAGGCCCTTGGCAAAACTTGGGTTTTTGGAAAAAAAAA
AAAACCCCTTTTGAAAAAAAAAAAAAAAAAAAAAAAGGGGGGCGGCCGCC
CCCAAGAAGAAATCCAAACTTTAAATATCCCCGGGGGGGCCGCGAACCCC
CTAAACCCCTCTTTTAAAAGGGGGGCCCCCCAAAAATTTTCAATTTCCCG
GGGGGCGCGCCCGCTTTTTTAAACAAACGCGGGGGGGGGGGGGG
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