EY676030

Overview
NameEY676030
Unique NameEY676030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.442e-12
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 2
Query:  299 TDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            T +EGG F L++ F  DYP KPPK  F    +HPN+   G++C++IL +   W PA+ V+++L+ I  LLE P
Sbjct:   49 TPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDK--WTPALMVEKVLLSILLLLEKP 119          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.442e-12
Identity = 30/71 (42.25%), Postives = 45/71 (63.38%), Query Frame = 2
Query:  305 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            + GG F L +HF  DYP KPPK  F    +HPN+  +G++CL IL +   W PA+T+ ++L+ I ++L  P
Sbjct:   45 YSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQ--WSPALTISKVLLSICSMLTDP 113          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.043e-11
Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 2
Query:  299 TDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            T +E G F LTL F++ YP+KPP  +F    FHPN+Y +G +CL IL   N W P   V  IL  +Q+LL  P
Sbjct:   46 TPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDIL--QNRWSPTYDVAAILTSVQSLLNDP 116          

HSP 2 Score: 20.4014 bits (41), Expect = 1.043e-11
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 3
Query:  510 NHPNPANPA 536
            N PNPA+PA
Sbjct:  114 NDPNPASPA 122          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11
Identity = 30/71 (42.25%), Postives = 45/71 (63.38%), Query Frame = 2
Query:  305 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            + GG F L +HF  DYP KPPK  F    +HPN+  +G++CL IL +   W PA+T+ ++L+ I ++L  P
Sbjct:   45 YAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQ--WSPALTISKVLLSICSMLTDP 113          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 2
Query:  299 TDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILN---------EDNG--WRPAITVKQILVRIQNLLEPP 517
            T +EGGFF  TL F +DYP  PPK KF    +HPNV+P+G VC+SIL+         ED G  W P  + + IL+ + ++L  P
Sbjct:   48 TLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSP 131          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.611e-11
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 2
Query:  305 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            + GG F + +HF  DYP KPPK  F    FHPN+  +G +CL IL +   W PA+T+ ++L+ I +LL  P
Sbjct:   45 YSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQ--WSPALTISKVLLSICSLLTDP 113          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 2
Query:  305 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLL 508
            + GG F L++HF  DYP KPPK  F    +HPN+  SG +CL IL +   W PA+T+ ++L+ I +LL
Sbjct:   46 YAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDILKDQ--WSPALTLSKVLLSICSLL 111          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11
Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 2
Query:  305 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            ++GG F LT+HF  DYP KPPK  F    +HPN+  + ++CL IL     W PA+T+ ++L+ I +LL  P
Sbjct:   45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDILRSQ--WSPALTISKVLLSICSLLCDP 113          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11
Identity = 31/71 (43.66%), Postives = 46/71 (64.79%), Query Frame = 2
Query:  305 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            ++GG F LT+ F  +YP KPPK +F    +HPNV  +G++CL IL     W PA+T+ ++L+ I +LL  P
Sbjct:   45 YQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQ--WSPALTISKVLLSISSLLCDP 113          
BLAST of EY676030 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11
Identity = 31/71 (43.66%), Postives = 46/71 (64.79%), Query Frame = 2
Query:  305 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVRIQNLLEPP 517
            ++GG F LT+ F  +YP KPPK +F    +HPNV  +G++CL IL     W PA+T+ ++L+ I +LL  P
Sbjct:   45 YQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQ--WSPALTISKVLLSISSLLCDP 113          
The following BLAST results are available for this feature:
BLAST of EY676030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
UBC31_ARATH9.442e-1243.84Probable ubiquitin carrier protein E2 31 OS=Arabid... [more]
UBC1_COLGL9.442e-1242.25Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletot... [more]
UBC2_CRYNE1.043e-1146.58Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus ... [more]
UBC1_MAGGR1.233e-1142.25Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnapor... [more]
UBC15_SCHPO1.233e-1144.05Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccha... [more]
UBC29_ARATH1.611e-1143.66Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC5_YEAST2.103e-1145.59Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharo... [more]
UB2D3_BOVIN2.747e-1143.66Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus G... [more]
U2D2B_RAT3.588e-1143.66Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norv... [more]
U2D2B_MOUSE3.588e-1143.66Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-017-H04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676030 ID=EY676030; Name=EY676030; organism=Citrus sinensis; type=EST; length=944bp
CCACGCGTCCGCCATTTTCCTCACCTTACAATATGTTTCTGCTTCATCTT
TGTTATGTCTATGTTTATGATGATACGGCTTTGTTTATGCTACCTTTTTT
TTTTTTTTTTCGTTATAGATATGTTGTCAATAACTTAGCATTGTCATTGA
TTTGATGATGAATAGATAGATGGAACAAACACACACACACACACACACAA
AATCTATATGTATATATAAATTAATAATGAATATACTAGTTCTTTCTGGG
GAAGATTACAAATTTGTTAAGTAATTTCTGATAATGTTATGCTTCTAGAC
TGATTGGGAGGGTGGTTTCTTCCCACTCACTCTCCACTTCAGCGAAGATT
ACCCTAGCAAGCCACCAAAGTGCAAGTTTCCGCAAGGATTTTTCCACCCT
AATGTCTATCCATCTGGAACTGTTTGTCTATCAATCCTCAATGAGGACAA
TGGGTGGAGACCAGCCATCACAGTGAAGCAAATTCTTGTCCGTATCCAAA
ACTTGTTGGAACCACCCAAATCCTGCAAATCCTGCACAAACAAAAAGGTT
ATCCTCCCCTTCTTTCAGGAAGGCGGCAAAATAACAAAAAAAAAATTCGG
GCACCAAGCCAAAGCAATACCCTGGCACTCCTCAAAATTTTTGGTTGGGG
TTTTTTTATGGGACTTTTATTAAAACCCCTGGGGAAATGGGAGAAATGGG
CTTTTTGGAAAAAAGGCCCTTGGCAAAACTTGGGTTTTTGGAAAAAAAAA
AAAACCCCTTTTGAAAAAAAAAAAAAAAAAAAAAAAGGGGGGCGGCCGCC
CCCAAGAAGAAATCCAAACTTTAAATATCCCCGGGGGGGCCGCGAACCCC
CTAAACCCCTCTTTTAAAAGGGGGGCCCCCCAAAAATTTTCAATTTCCCG
GGGGGCGCGCCCGCTTTTTTAAACAAACGCGGGGGGGGGGGGGG
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