EY658298

Overview
NameEY658298
Unique NameEY658298
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1049
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY658298 vs. ExPASy Swiss-Prot
Match: LLDD_ECO57 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O157:H7 GN=lldD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.208e-11
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 1
Query:   67 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFPSSNTIKEVAGPAPK 414
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS  S   I+EVA PA K
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVA-PAIK 121          
BLAST of EY658298 vs. ExPASy Swiss-Prot
Match: LLDD_ECO55 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain 55989 / EAEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.208e-11
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 1
Query:   67 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFPSSNTIKEVAGPAPK 414
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS  S   I+EVA PA K
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVA-PAIK 121          
BLAST of EY658298 vs. ExPASy Swiss-Prot
Match: LLDD_ECO24 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.208e-11
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 1
Query:   67 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFPSSNTIKEVAGPAPK 414
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS  S   I+EVA PA K
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVA-PAIK 121          
BLAST of EY658298 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAE (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa GN=lldD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.471e-11
Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 1
Query:   70 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFPSSNTIKEVA 399
            +++  A+  LP   + +  GGA  E+TL+ NVE    I  R R+L ++S + L T + D  ++ P+ +AP  L  +    GEV  ARAAA+      LS  S   I+EVA
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYAEYTLRRNVEDLSAIALRQRVLKNMSELSLETRLFDETLAMPVALAPVGLTGMYARRGEVQAARAAAAKGVPFTLSTVSVCPIEEVA 117          
BLAST of EY658298 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAB (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=lldD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.471e-11
Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 1
Query:   70 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFPSSNTIKEVA 399
            +++  A+  LP   + +  GGA  E+TL+ NVE    I  R R+L ++S + L T + D  ++ P+ +AP  L  +    GEV  ARAAA+      LS  S   I+EVA
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYAEYTLRRNVEDLSAIALRQRVLKNMSELSLETRLFDETLAMPVALAPVGLTGMYARRGEVQAARAAAAKGVPFTLSTVSVCPIEEVA 117          
BLAST of EY658298 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA8 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain LESB58) GN=lldD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.471e-11
Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 1
Query:   70 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFPSSNTIKEVA 399
            +++  A+  LP   + +  GGA  E+TL+ NVE    I  R R+L ++S + L T + D  ++ P+ +AP  L  +    GEV  ARAAA+      LS  S   I+EVA
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYAEYTLRRNVEDLSAIALRQRVLKNMSELSLETRLFDETLAMPVALAPVGLTGMYARRGEVQAARAAAAKGVPFTLSTVSVCPIEEVA 117          
BLAST of EY658298 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA7 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain PA7) GN=lldD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.471e-11
Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 1
Query:   70 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFPSSNTIKEVA 399
            +++  A+  LP   + +  GGA  E+TL+ NVE    I  R R+L ++S + L T + D  ++ P+ +AP  L  +    GEV  ARAAA+      LS  S   I+EVA
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYAEYTLRRNVEDLSAIALRQRVLKNMSELSLETRLFDETLAMPVALAPVGLTGMYARRGEVQAARAAAAKGVPFTLSTVSVCPIEEVA 117          
BLAST of EY658298 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPW (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain W619) GN=lldD PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.333e-11
Identity = 39/110 (35.45%), Postives = 58/110 (52.73%), Query Frame = 1
Query:   70 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFPSSNTIKEVA 399
            +++  A+  LP   + +  GGA  EHTL+ NV     I  R R+L ++S + L T + D  +S P+ +AP  L  +    GEV  ARAAA+      +S  S   I+EVA
Sbjct:    8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLAGIALRQRVLKNMSELSLETRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVA 117          
BLAST of EY658298 vs. ExPASy Swiss-Prot
Match: LLDD_ENTS8 (L-lactate dehydrogenase [cytochrome] OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=lldD PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.333e-11
Identity = 38/111 (34.23%), Postives = 61/111 (54.95%), Query Frame = 1
Query:   67 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFPSSNTIKEVA 399
            ++++  A+  LP   + +  GGA  E+TLK NVE   ++  R R+L ++S + L TT+ +  +S P+ + P  L  +    GEV  ARAA++      LS  S   I+EVA
Sbjct:    7 SDYRAAAQRILPPFLFHYIDGGAYAEYTLKRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALGPVGLCGMYARRGEVQAARAASAKGIPFTLSTVSVCPIEEVA 117          
BLAST of EY658298 vs. ExPASy Swiss-Prot
Match: LLDD_ECOUT (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain UTI89 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.333e-11
Identity = 41/116 (35.34%), Postives = 63/116 (54.31%), Query Frame = 1
Query:   67 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFPSSNTIKEVAGPAPK 414
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ + P  L  +    GEV  A+AA +      LS  S   I+EVA PA K
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVA-PAIK 121          
The following BLAST results are available for this feature:
BLAST of EY658298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
LLDD_ECO573.208e-1136.21L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO553.208e-1136.21L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO243.208e-1136.21L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_PSEAE5.471e-1135.45L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEAB5.471e-1135.45L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEA85.471e-1135.45L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEA75.471e-1135.45L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEPW9.333e-1135.45L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_ENTS89.333e-1134.23L-lactate dehydrogenase [cytochrome] OS=Enterobact... [more]
LLDD_ECOUT9.333e-1135.34L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-135-G04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY658298 ID=EY658298; Name=EY658298; organism=Citrus sinensis; type=EST; length=1049bp
CCACGCGTCCGCGGACGCGTGGGTTTAGGAATTAGGTTTCAAATGGCAGC
TGAACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCCCTTC
CAAAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACATACC
CTAAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGCCAAGAAT
TCTTGTCGATGTCAGCAGAATAGATTTATCGACTACTATACTTGATTACA
AAATCTCGGCTCCCATTATCATTGCTCCAACGGCTTTGCATAAGCTTGCA
AACCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTAACAC
CATAATGGTTTTATCCTTCCCATCTAGCAACACCATAAAGGAGGTTGCGG
GCCCAGCTCCAAAGCTGTTCGCTTCTATCAGTTTATTTGGTATTCAAGAA
ACGAGAAATAACAGCTAACCTCCAGTGGCAAAAGCTGAAAAGGAAAGGGT
TTTAAGGGCCTTGGCCCCAAACTGTTGAAAACCCCAGAAACTTGGTTGAA
AGGGGGAGGCAGAATATAAGAACAAAAATGATTACCCCGCCATTGAAAAA
ATTTGGAAAAGGCCCCTTATCAACCCAAAGTCCAGCTCCGAAAACAGGGT
TCAAAATTTTGGAAGCCAGAAGGCCAAAGGAAACCACGGGGAGGGCTTCT
TTTAAAGTTGGGAAGGGATTTTTAAAGAGGCGAAAAAATCTATTAACAAA
ACTTCACCAATTTTTTGATTTAAGGGGGGAAAAATTATCACGGGGAAAAA
AATCACTAAAAAACACCTGGGGAAAAATGGGGGTTTTGCGGGGGAATTTT
TTTTGTGCCCCTCTCTTACTGGAGGTTCCCACAAGTATGTATAAATATAA
TGAACTCGGCCGCCCTATTTTTTTTTTTGTGCGCCTCGTAGGAAGAGAGA
GGGGGTGGGGTGCATATGCGGCGTCTTTTGTATGAAGTAGAAAAGGAAAT
TGATACCCCTCACACTATTATTTTGTTTGTGTTTGGTGATAGAGGAGTG
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