EY676011

Overview
NameEY676011
Unique NameEY676011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676011 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.030e-35
Identity = 64/117 (54.70%), Postives = 79/117 (67.52%), Query Frame = 3
Query:   21 VYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQXXXXXXXXXXXXESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFIT 371
            V+FD+   G+P+GRI+M LF   VP+T ENFRALCTGEKG G       +K S FHR++P F+ Q            +SI+G+ F DENF LKHTGPG+LSMAN G +TN SQFFIT
Sbjct: 2895 VFFDVCADGEPLGRIIMELFSNIVPQTAENFRALCTGEKGFG-------FKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSMANYGQNTNSSQFFIT 3004          

HSP 2 Score: 38.5058 bits (88), Expect = 2.030e-35
Identity = 19/36 (52.78%), Postives = 22/36 (61.11%), Query Frame = 1
Query:  391 LDGRHVVFGKVLSGMDVVRKIEAEGKQSGGPQK*SC 498
            LD +HVVFG V  GMD VRKIE+ G   G   +  C
Sbjct: 3011 LDFKHVVFGFVKDGMDTVRKIESFGSPKGSVSRRIC 3046          
BLAST of EY676011 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 2.295e-35
Identity = 73/119 (61.34%), Postives = 87/119 (73.11%), Query Frame = 3
Query:   18 QVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKS-GKPLYYKGSSFHRIIPSFMIQXXXXXXXXXXXXESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFIT 371
            +V+FD+++GG+ +GRIV+ LF   VPKT ENFRALCTGEKG G + GKPL++KG  FHRII  FMIQ            ESI+GE F DENF  KH   G+LSMANAGP+TNGSQFFIT
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFIT 135          
BLAST of EY676011 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35
Identity = 73/121 (60.33%), Postives = 89/121 (73.55%), Query Frame = 3
Query:    9 VTHQVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQXXXXXXXXXXXXESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFIT 371
            + ++V+F I+ G  P+GR+V  L+   VPKT ENFRALCTGEKGIGKSGKPL+YKGSSFHR+I +FM+Q            ESI+G +F DENF +KH   G LSMANAG +TNGSQFFIT
Sbjct:    5 IRNKVFFQIKQGNTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFIT 124          
BLAST of EY676011 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 3.548e-35
Identity = 63/117 (53.85%), Postives = 75/117 (64.10%), Query Frame = 3
Query:   18 QVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQXXXXXXXXXXXXESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFI 368
            +V+FDI +G    GRIVM L    VP+T ENFRALCTGE+G G       Y    FHR+IP FM Q            +SI+G  F DENF+L+H G GVLSMAN+GP+TNGSQFFI
Sbjct:  113 RVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFI 222          

HSP 2 Score: 46.2098 bits (108), Expect = 3.548e-35
Identity = 18/30 (60.00%), Postives = 26/30 (86.67%), Query Frame = 1
Query:  388 WLDGRHVVFGKVLSGMDVVRKIEAEGKQSG 477
            WLDG+HVVFG+V+ G +VV+K+E+ G +SG
Sbjct:  229 WLDGKHVVFGRVVDGQNVVKKMESVGSKSG 258          
BLAST of EY676011 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.914e-35
Identity = 70/117 (59.83%), Postives = 85/117 (72.65%), Query Frame = 3
Query:   21 VYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQXXXXXXXXXXXXESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFIT 371
            V+FDI +GG+  GR+   L+   VPKT ENFRALCTGEKG+G+SGKPL+YKGS+FHR+I  FM Q            ESI+GE F DE F + H+ P +LSMANAGP+TNGSQFFIT
Sbjct:    7 VFFDIAIGGQLAGRVAFRLYSDLVPKTAENFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDEGFPVHHSRPFLLSMANAGPNTNGSQFFIT 123          
BLAST of EY676011 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.914e-35
Identity = 75/121 (61.98%), Postives = 87/121 (71.90%), Query Frame = 3
Query:    6 KVTHQVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQXXXXXXXXXXXXESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFI 368
            KVT +++FDIE+GG+  GRIV+GLFG AVPKTVENF+ L TG KG G       Y+GS FHRIIP+FMIQ             SI+G  F DE+F LKH GPGVLSMANAGP+TNGSQFFI
Sbjct:   79 KVTSKIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYG-------YQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFI 192          
BLAST of EY676011 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 73/119 (61.34%), Postives = 87/119 (73.11%), Query Frame = 3
Query:   18 QVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKS-GKPLYYKGSSFHRIIPSFMIQXXXXXXXXXXXXESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFIT 371
            +V+FD+++GG+ +GRIV+ LF   VPKT ENFRALCTGEKGIG + GKPL++KG  FHRII  FMIQ            ESI+GE F DENF  KH   G+LSMANAG +TNGSQFFIT
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFIT 135          
BLAST of EY676011 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/122 (60.66%), Postives = 85/122 (69.67%), Query Frame = 3
Query:    6 KVTHQVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQXXXXXXXXXXXXESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFIT 371
            KVT +VYFD ++G +P+GR+  GLFGK VPKTV+NF AL TGEKG G       YK S FHR+I  FMIQ            +SI+GE F DENFKLKH GPG +SMANAG DTNGSQFFIT
Sbjct:   41 KVTVKVYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFIT 155          
BLAST of EY676011 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 73/117 (62.39%), Postives = 85/117 (72.65%), Query Frame = 3
Query:   21 VYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQXXXXXXXXXXXXESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFIT 371
            VYFDIE G KP+GR+V+GL+GK VPKT ENFRAL TGEKG G       Y+GS+FHR+I  FMIQ            +SI+GE F DENFK++HT  G+LSMANAG DTNGSQFFIT
Sbjct:   22 VYFDIEHGNKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFIT 131          
BLAST of EY676011 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.083e-35
Identity = 64/123 (52.03%), Postives = 76/123 (61.79%), Query Frame = 3
Query:    3 EKVTHQVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQXXXXXXXXXXXXESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFIT 371
            ++ +  VYFD+    + +GRIVM L    VPKT +NFR LC   KG G       YKGS+FHRIIP FM+Q             SI+GE F DENF+LKHT  G+LSMAN G  TNGSQFFIT
Sbjct:    3 KEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEG-------YKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFIT 118          

HSP 2 Score: 46.9802 bits (110), Expect = 6.083e-35
Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = 1
Query:  382 TSWLDGRHVVFGKVLSGMDVVRKIEAEGKQSGGPQK 489
            T WLD +HVVFG+V+ GMDVV KI   G +SG  +K
Sbjct:  122 TQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKK 157          
The following BLAST results are available for this feature:
BLAST of EY676011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
RBP2_MOUSE2.030e-3554.70E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
PPID_RAT2.295e-3561.3440 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
PPID_DICDI2.997e-3560.33Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
PPIE_SCHMA3.548e-3553.85Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]
PPID_AMAMU3.914e-3559.83Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]
CYPB_VICFA3.914e-3561.98Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPID_BOVIN5.112e-3561.3440 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPIB_RAT5.112e-3560.66Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]
PPIB_ASPOR5.112e-3562.39Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
CYPH_ENCCU6.083e-3552.03Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-017-F09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676011 ID=EY676011; Name=EY676011; organism=Citrus sinensis; type=EST; length=846bp
TGGAAAAAGTGACCCACCAAGTTTACTTTGATATCGAGGTTGGTGGGAAA
CCCATTGGTCGCATAGTTATGGGCCTATTTGGGAAGGCTGTCCCTAAAAC
TGTAGAAAACTTCCGAGCACTTTGCACAGGGGAGAAAGGAATTGGGAAGA
GTGGGAAACCACTTTATTATAAAGGGAGCTCATTTCACAGGATTATTCCA
AGCTTTATGATCCAGGGCGGTGATTTTACTCTTGGTGATGGGCGTGGTGG
AGAGTCAATATTTGGGGAAAGTTTTGCTGATGAGAACTTTAAACTGAAGC
ACACTGGACCAGGAGTTCTGTCGATGGCAAATGCTGGGCCAGACACCAAT
GGGTCACAGTTCTTCATTACGGGCTGTCATAACTAGCTGGTTGGATGGCC
GCCATGTTGTGTTTGGCAAAGTGCTCTCTGGGATGGATGTTGTCCGCAAA
ATTGAAGCGGAAGGGAAGCAGAGTGGGGGACCCCAAAAGTAAAGTTGTTA
TATCTAACAGTGGTGAAATGGCTTTTGTGAACGAACATCCCTAATTAATT
TTTTTTATGGGAAATTGAAAACTTGGGGCTAATTTTGTGGCCATCGGTTT
TGGTTCCCCCTTCCCTTTCCGGGTTGGGAATAGGGGCTCGGAAAAAAAAA
ACACCCCTTATTTCCTTTTTTTGGAATTTGGCAAGGGGGCCTTTTAAAAA
AATTCCCAACCCTGGGAAAAAAACCCCCGGTTTTTTCCCTAGAAAAAAAT
TTTGGGGGTTTCTTTTAGAAAAAAGAAAAAAAAAAAAGAACAAAAAAAAA
AAAGAGAAAGAAAATGGCAGTATAAAAATAGAAAGCAGAATAACGA
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