EY658224

Overview
NameEY658224
Unique NameEY658224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.269e-49
Identity = 95/113 (84.07%), Postives = 99/113 (87.61%), Query Frame = 2
Query:  149 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEARGGSKAGDPNLQRG 487
            GR+SMRKT SK+VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH +WAM G +LGCVFPELLARNGVKFGEA    KAG      G
Sbjct:   11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG-ALGCVFPELLARNGVKFGEA-SWFKAGSQIFSEG 121          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.576e-49
Identity = 93/119 (78.15%), Postives = 105/119 (88.24%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            F GKAVN+ PS +E++  G+++MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHC+W M G +LGCVFPEL ARNGVKFGEA
Sbjct:   13 FAGKAVNV-PSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLG-ALGCVFPELFARNGVKFGEA 129          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 7.282e-49
Identity = 116/205 (56.59%), Postives = 137/205 (66.83%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEARGGSKAGDPNLQRGRAWITWGNPKPDPTTQSSLGHLGLGQWVLKGNPFKG*KNWREGPLGKSD*THCPPRGHFFNPCGVWGENPERF 706
            F GKAV L+P+ +E+   GR++MRKT +K    SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH +WAM G +LGCVFPELLARNGVKFGEA    KAG      G      GN  P      S+  +   Q +L G   +G +    GPLG+++    P  G  F+P G+   +PE F
Sbjct:   13 FAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG-ALGCVFPELLARNGVKFGEA-VWFKAGSQIFSDG-GLDYLGN--PSLVHAQSILAIWATQVILMG-AVEGYRVAGNGPLGEAEDLLYP--GGSFDPLGL-ATDPEAF 208          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.060e-47
Identity = 97/126 (76.98%), Postives = 104/126 (82.54%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEARGGSKAG 466
            F GKAV   PS + L    R++MRKT +K+  VSS SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC+WAM G +LGCVFPELLARNGVKFGEA G  KAG
Sbjct:   13 FAGKAVKNLPS-SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG-ALGCVFPELLARNGVKFGEA-GWFKAG 135          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 3.475e-47
Identity = 93/120 (77.50%), Postives = 100/120 (83.33%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKS---VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            F GKAVN+  S   L    R++MRKT +K+    SSGSPWYGPDRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH +WAM G +LGCVFPELLARNGVKFGEA
Sbjct:   13 FAGKAVNVPSS---LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG-ALGCVFPELLARNGVKFGEA 128          

HSP 2 Score: 24.2534 bits (51), Expect = 3.475e-47
Identity = 30/86 (34.88%), Postives = 41/86 (47.67%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W   +         ++AGG P  + ++PL P G  F PL GL   P + F   +KVKE+K
Sbjct:  139 SEGGLDYLGNPSL-IHAQSIL---AIWACQVVLMGAIEGYRVAGG-PLGEVVDPLYP-GGTFDPL-GLADDP-EAFA-DVKVKELK 215          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.902e-47
Identity = 96/140 (68.57%), Postives = 105/140 (75.00%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEARGGSKAGDPNLQRGRAWITWGNP 514
            F GKAV    S +E+    R+SMRKT +     GSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH +WAM G +LGCVFPELLARNGVKFGEA    K      + G  ++  GNP
Sbjct:   13 FAGKAVKNLSSSSEVQGDARVSMRKTAATK-KVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLG-ALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYL--GNP 148          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.002e-46
Identity = 91/117 (77.78%), Postives = 97/117 (82.91%), Query Frame = 2
Query:  101 GKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            GK + L PS  EL    R +MRK  T  K  SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH +WAM G +LGCVFPELL+RNGVKFGEA
Sbjct:   18 GKQLKLNPSSQELG-AARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLG-ALGCVFPELLSRNGVKFGEA 132          

HSP 2 Score: 25.7942 bits (55), Expect = 1.002e-46
Identity = 31/86 (36.05%), Postives = 42/86 (48.84%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W   +         ++AGG P  + ++PL P G+ F PL GL   P + F   LKVKE+K
Sbjct:  143 SEGGLDYLGNPSL-VHAQSIL---AIWATQVILMGAVEGYRIAGG-PLGEVVDPLYPGGS-FDPL-GLADDP-EAFA-ELKVKELK 219          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.220e-46
Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 2
Query:  149 GRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            GRI+MRKT  K    +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH +WAM G +LGCVFPELL+RNGVKFGEA
Sbjct:   26 GRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG-ALGCVFPELLSRNGVKFGEA 125          

HSP 2 Score: 25.7942 bits (55), Expect = 2.220e-46
Identity = 31/86 (36.05%), Postives = 42/86 (48.84%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W   +         ++AGG P  + ++PL P G+ F PL GL   P + F   LKVKE+K
Sbjct:  136 SEGGLDYLGNPSL-IHAQSIL---AIWACQVVLMGAVEGYRIAGG-PLGEVVDPLYPGGS-FDPL-GLADDP-EAFA-ELKVKELK 212          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.912e-46
Identity = 92/119 (77.31%), Postives = 98/119 (82.35%), Query Frame = 2
Query:  101 GKAVNLA--PSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            GK V  +  PS  EL  G R +MRK  T  K  SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH +WAM G +LGCVFPELL+RNGVKFGEA
Sbjct:   15 GKPVETSANPSSQELG-GARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLG-ALGCVFPELLSRNGVKFGEA 131          

HSP 2 Score: 25.7942 bits (55), Expect = 4.912e-46
Identity = 31/86 (36.05%), Postives = 42/86 (48.84%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W   +         ++AGG P  + ++PL P G+ F PL GL   P + F   LKVKE+K
Sbjct:  142 SEGGLDYLGNPSL-VHAQSIL---AIWATQVILMGAVEGYRIAGG-PLGEVVDPLYPGGS-FDPL-GLADDP-EAFA-ELKVKELK 218          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 4.913e-46
Identity = 89/113 (78.76%), Postives = 95/113 (84.07%), Query Frame = 2
Query:  119 APS-GNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            APS  + L    RI+MRKT +K   + SSGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH +WAM G +LGCVFPELLARNGVKFGEA
Sbjct:   17 APSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG-ALGCVFPELLARNGVKFGEA 128          

HSP 2 Score: 29.6462 bits (65), Expect = 4.913e-46
Identity = 34/86 (39.53%), Postives = 43/86 (50.00%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W V +         ++AGG P  + ++PL P GA F PL GL   P + F   LKVKEIK
Sbjct:  139 SEGGLDYLGNPSL-IHAQSIL---AIWAVQVVLMGAVEGYRIAGG-PLGEVVDPLYPGGA-FDPL-GLADDP-EAFA-ELKVKEIK 215          
The following BLAST results are available for this feature:
BLAST of EY658224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CB21_SOYBN3.269e-4984.07Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB21_PETSP5.576e-4978.15Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB22_ARATH7.282e-4956.59Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB21_WHEAT3.060e-4776.98Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB29_MAIZE3.475e-4777.50Chlorophyll a-b binding protein M9, chloroplastic ... [more]
CB22_HORVU8.902e-4768.57Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB22_PEA1.002e-4677.78Chlorophyll a-b binding protein AB80, chloroplasti... [more]
CB21_MAIZE2.220e-4686.14Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB28_PEA4.912e-4677.31Chlorophyll a-b binding protein 8, chloroplastic O... [more]
CB21_ORYSJ4.913e-4678.76Chlorophyll a-b binding protein 1, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-134-H09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY658224 ID=EY658224; Name=EY658224; organism=Citrus sinensis; type=EST; length=934bp
CTTCTCTTGCTTACCAGCTTCTGTTGCTTACACAGCTTCTGCTTCTCAAT
TAAATTCCTCAATGGCAACCTCGACCATGGCTCTCTCCTCATCATTCGTC
GGCAAGGCTGTGAACCTTGCCCCTTCAGGCAATGAGCTGAGCAATGGTGG
CCGCATCTCCATGCGTAAAACCGGGAGCAAGTCTGTTTCTTCAGGTAGCC
CGTGGTACGGCCCGGACAGAGTCAAGTACTTGGGTCCATTCTCTGGCGAG
CCCCCAAGCTACTTGACTGGTGAGTTCCCTGGTGACTACGGTTGGGACAC
TGCTGGGCTTTCAGCTGACCCAGAAACCTTTGCCAAGAACCGTGAACTCG
AAGTCATCCACTGCAAATGGGCCATGTTTGGGAGCTCCTTGGGATGCGTC
TTCCCGGAGCTCTTGGCCCGCAACGGAGTCAAGTTCGGTGAGGCCCGTGG
TGGTTCAAAGGCGGGGGACCCAAATCTTCAACGAGGGCGGGCTTGGATTA
CTTGGGGGAACCCCAAGCCTGATCCCACGACCCAAAGCTCCTTGGGCCAC
CTGGGGCTTGGCCAGTGGGTCTTGAAAGGGAACCCATTTAAGGGTTAAAA
AAATTGGCGGGAGGGGCCCCTCGGGAAAAGTGACTGAACCCATTGTCCCC
CAAGGGGGCACTTTTTTAACCCCTGTGGGGTTTGGGGAGAAAACCCTGAA
AGGTTTTTGGGTGAACCTTAAAGGTAAAAGAAATCAAAAAAAAAGGAAAT
GGTGGGCTTTTTTTACCCCTAGTTTTGGTTATCTCTCATAAATGACTTCA
TTTCCACAAAGCAAAAAGAGAAACACAATAAAAAAAAAAATTGATGAGAA
ACCCGCGGTAACGTACGGAAACCCCTCGTATAGAAATAAAACAGTATCGG
GGGGGGGGGAGTCACTCTCCACACCCCACATATC
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