EY658224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 4.089e-45 Identity = 84/101 (83.17%), Postives = 90/101 (89.11%), Query Frame = 2 Query: 149 GRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445 GRI+MRK+ +K +SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH +WAM G +LGCVFPELLARNGVKFGEA Sbjct: 25 GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG-ALGCVFPELLARNGVKFGEA 124 HSP 2 Score: 28.4906 bits (62), Expect = 4.089e-45 Identity = 33/86 (38.37%), Postives = 43/86 (50.00%), Query Frame = 1 Query: 481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738 + GLDYLG P H +L W V + ++AGG P + ++PL P G+ F PL GL P + F LKVKEIK Sbjct: 135 SEGGLDYLGNPSL-IHAQSIL---AIWAVQVVLMGAVEGYRIAGG-PLGEVVDPLYPGGS-FDPL-GLADDP-EAFA-ELKVKEIK 211
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 9.043e-45 Identity = 90/120 (75.00%), Postives = 99/120 (82.50%), Query Frame = 2 Query: 113 NLAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445 ++ P N+L G R++MRK TG KSV++ SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH +WAM G +LGCVFPELLARNGVKFGEA Sbjct: 23 SVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG-ALGCVFPELLARNGVKFGEA 141 HSP 2 Score: 24.6386 bits (52), Expect = 9.043e-45 Identity = 32/86 (37.21%), Postives = 40/86 (46.51%), Query Frame = 1 Query: 481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738 + GLDYLG PQ H +L W + ++AGG P + +P+ P G F PL GL P F LKVKEIK Sbjct: 152 SEGGLDYLGSPQL-IHAQSIL---AIWACQVILMGAIEGYRVAGG-PLGEVTDPIYP-GGNFDPL-GLADDP-DAFA-ELKVKEIK 228
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 2.002e-44 Identity = 90/120 (75.00%), Postives = 99/120 (82.50%), Query Frame = 2 Query: 113 NLAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445 ++ P N+L G R++MRK TG KSV++ SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH +WAM G +LGCVFPELLARNGVKFGEA Sbjct: 23 SVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG-ALGCVFPELLARNGVKFGEA 141 HSP 2 Score: 23.483 bits (49), Expect = 2.002e-44 Identity = 31/86 (36.05%), Postives = 40/86 (46.51%), Query Frame = 1 Query: 481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738 + GLDYLG PQ H +L W + ++AGG P + +P+ P G F PL GL P F +KVKEIK Sbjct: 152 SEGGLDYLGSPQL-IHAQSIL---AIWACQVILMGAIEGYRVAGG-PLGEVTDPIYP-GGNFDPL-GLADDP-DAFA-DVKVKEIK 228
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.166e-44 Identity = 112/216 (51.85%), Postives = 132/216 (61.11%), Query Frame = 2 Query: 101 GKAVNLAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEARGGSKAGDPNLQRGRAWITWGNPKPDPTTQSSLGHLG--LGQWVLKGNPFKG*KNWR--EGPLGKSD*THCPPRGHFFNPCGVWGENPERF 706 G+ +L P N+L G R++MRK +K ++ S SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHC+WAM G +LGCVFPELLARNGVKFGEA + G ++ GNP SL H L W + + +R GPLG+ P G F+P G+ E+PE F Sbjct: 14 GQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLG-ALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYL--GNP--------SLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYP--GGSFDPLGL-AEDPEAF 215
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 3.870e-42 Identity = 108/190 (56.84%), Postives = 124/190 (65.26%), Query Frame = 2 Query: 143 NGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEARGGSKAGDPNLQRGRAWITWGNPKPDPTTQSSLGHLGLGQWVLKGNPFKG*KNWR--EGPLGKSD*THCPPRGHFFNPCGVWGENPERF 706 NGGR+SMR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC+WAM G +LGCVFPELLA+NGVKFGEA KAG Q G GN P+ S+ + Q VL G + +R GPLG+ P G F+P G+ E+PE F Sbjct: 30 NGGRVSMRRTIKSAPES--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG-ALGCVFPELLAKNGVKFGEA-VWFKAGSQIFQEG-GLDYLGN--PNLVHAQSILAIWACQVVLMG----AVEGYRVGGGPLGEGLDQLYP--GGAFDPLGL-AEDPEAF 205
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 5.216e-42 Identity = 78/92 (84.78%), Postives = 82/92 (89.13%), Query Frame = 2 Query: 170 TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445 T K SS SPW+GPD VKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH +WAM G +LGCVFPELL+RNGVKFGEA Sbjct: 1 TTKKVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG-ALGCVFPELLSRNGVKFGEA 91 HSP 2 Score: 26.9498 bits (58), Expect = 5.216e-42 Identity = 36/107 (33.64%), Postives = 50/107 (46.73%), Query Frame = 1 Query: 481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIKKKGNG--------GLFLPLVL 777 + GLDYLG P H +L W + ++AGG P + ++PL P G+ F PL GL P + F LKVKE+K NG G F+P ++ Sbjct: 102 SEGGLDYLGNPSL-VHAQSIL---AIWATQVILMGAVEGYRIAGG-PLGEVVDPLYPGGS-FDPL-GLAEVP-EAFA-ELKVKELK---NGRLAMFSMFGFFVPAIV 196
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.956e-41 Identity = 88/115 (76.52%), Postives = 94/115 (81.74%), Query Frame = 2 Query: 101 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445 G+A+ LAPS EL G R+SMRKT K+VSSGSPWYGPDRVKYLGPFSGE PSYLTGEF GLSADPETFAKNRELEVIH +WAM G +LGCVFPELLARNGVKFGEA Sbjct: 15 GQAMKLAPSTPELGVG-RVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF--------HGLSADPETFAKNRELEVIHSRWAMLG-ALGCVFPELLARNGVKFGEA 119 HSP 2 Score: 23.483 bits (49), Expect = 1.956e-41 Identity = 29/86 (33.72%), Postives = 40/86 (46.51%), Query Frame = 1 Query: 481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738 + GLDYLG P H +L W + ++AGG P + +P+ P G+ F PL GL P + LKVKE+K Sbjct: 130 SEGGLDYLGNPSL-IHAQSIL---AIWATQVILMGAVEGYRIAGG-PLGEVTDPIYPGGS-FDPL-GLADDPEALA--ELKVKELK 206
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.509e-41 Identity = 81/100 (81.00%), Postives = 85/100 (85.00%), Query Frame = 2 Query: 149 GRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGE 442 GRI+MRKT +K SGSPWYG DRV YLGP SG PPSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIHC+WA+ LGCVFPELLARNGVKFGE Sbjct: 28 GRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAI-AVGLGCVFPELLARNGVKFGE 126
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 1.245e-40 Identity = 84/123 (68.29%), Postives = 97/123 (78.86%), Query Frame = 2 Query: 146 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA---RGGSK---------AGDPNL 478 GGR+SMR+T + +S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC+WAM G +LGCVFPE+L++NGVKFGEA + GS+ G+PNL Sbjct: 32 GGRVSMRRTVKSAPTS--IWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG-ALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNL 151
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 7.946e-40 Identity = 80/114 (70.18%), Postives = 92/114 (80.70%), Query Frame = 2 Query: 119 APSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445 AP +EL +GGRI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH +WAM G +LGCVFPE+L++NGVKFGEA Sbjct: 16 APRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG-ALGCVFPEILSKNGVKFGEA 126 HSP 2 Score: 24.2534 bits (51), Expect = 7.946e-40 Identity = 32/87 (36.78%), Postives = 41/87 (47.13%), Query Frame = 1 Query: 481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREP-I*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738 + GLDYLG P H +L W V + + G + GG P + L+ + P GA F PL GL P F LKVKE+K Sbjct: 137 SEGGLDYLGNPNL-VHAQSIL---AIWAVQVVLMGFVEGYR--VGGGPLGEGLDKVYPGGA-FDPL-GLADDP-DTFA-ELKVKELK 213 The following BLAST results are available for this feature:
BLAST of EY658224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >EY658224 ID=EY658224; Name=EY658224; organism=Citrus sinensis; type=EST; length=934bpback to top |