EY658224

Overview
NameEY658224
Unique NameEY658224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11
Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 2 
Query:  173 GSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGV 430
            GS+SV+  +    PDR  +   F G  PP +L G  PGD+G+D  GL +DPE+   N + E++H +WAM G++ G   PE L + GV
Sbjct:   50 GSRSVAVSAVAADPDRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAA-GIFIPEFLTKIGV 132
The following BLAST results are available for this feature:
BLAST of EY658224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CB12_PETHY6.027e-1141.38Chlorophyll a-b binding protein, chloroplastic OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-134-H09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY658224 ID=EY658224; Name=EY658224; organism=Citrus sinensis; type=EST; length=934bp
CTTCTCTTGCTTACCAGCTTCTGTTGCTTACACAGCTTCTGCTTCTCAAT
TAAATTCCTCAATGGCAACCTCGACCATGGCTCTCTCCTCATCATTCGTC
GGCAAGGCTGTGAACCTTGCCCCTTCAGGCAATGAGCTGAGCAATGGTGG
CCGCATCTCCATGCGTAAAACCGGGAGCAAGTCTGTTTCTTCAGGTAGCC
CGTGGTACGGCCCGGACAGAGTCAAGTACTTGGGTCCATTCTCTGGCGAG
CCCCCAAGCTACTTGACTGGTGAGTTCCCTGGTGACTACGGTTGGGACAC
TGCTGGGCTTTCAGCTGACCCAGAAACCTTTGCCAAGAACCGTGAACTCG
AAGTCATCCACTGCAAATGGGCCATGTTTGGGAGCTCCTTGGGATGCGTC
TTCCCGGAGCTCTTGGCCCGCAACGGAGTCAAGTTCGGTGAGGCCCGTGG
TGGTTCAAAGGCGGGGGACCCAAATCTTCAACGAGGGCGGGCTTGGATTA
CTTGGGGGAACCCCAAGCCTGATCCCACGACCCAAAGCTCCTTGGGCCAC
CTGGGGCTTGGCCAGTGGGTCTTGAAAGGGAACCCATTTAAGGGTTAAAA
AAATTGGCGGGAGGGGCCCCTCGGGAAAAGTGACTGAACCCATTGTCCCC
CAAGGGGGCACTTTTTTAACCCCTGTGGGGTTTGGGGAGAAAACCCTGAA
AGGTTTTTGGGTGAACCTTAAAGGTAAAAGAAATCAAAAAAAAAGGAAAT
GGTGGGCTTTTTTTACCCCTAGTTTTGGTTATCTCTCATAAATGACTTCA
TTTCCACAAAGCAAAAAGAGAAACACAATAAAAAAAAAAATTGATGAGAA
ACCCGCGGTAACGTACGGAAACCCCTCGTATAGAAATAAAACAGTATCGG
GGGGGGGGGAGTCACTCTCCACACCCCACATATC
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