EY675933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675933 vs. ExPASy Swiss-Prot
Match: RS4E_SULIL (30S ribosomal protein S4e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rps4e PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.055e-20 Identity = 61/184 (33.15%), Postives = 94/184 (51.09%), Query Frame = 3 Query: 84 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANE---TIKLDLKKTRTLTSSILMLGNIVRVTGG*N 626 H+ R P ++ K + +P++GPH + +PL +V+R+ LK A T RE I+ VLVDGKVR D YP G MD+VSIP + FR++ D RL + +EA +K ++ + + G +N DGR I K+ + T+K++L + S I+ G+ GG N Sbjct: 3 HITRFETPWFLVISKKQYKWTVRPNAGPHPIEKSIPLAVVIRDYLKLAETVREAKHIIFDGKVLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVIPDNVRFMRLSKISADEAHYKYVRIMNKTTVKGGSIQLNLEDGRNILVDKETAKSFKTLMTLKIELPSQNIVDSFIISEGSYAIFVGGKN 186
BLAST of EY675933 vs. ExPASy Swiss-Prot
Match: RS4E_SULIK (30S ribosomal protein S4e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rps4e PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.055e-20 Identity = 61/184 (33.15%), Postives = 94/184 (51.09%), Query Frame = 3 Query: 84 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANE---TIKLDLKKTRTLTSSILMLGNIVRVTGG*N 626 H+ R P ++ K + +P++GPH + +PL +V+R+ LK A T RE I+ VLVDGKVR D YP G MD+VSIP + FR++ D RL + +EA +K ++ + + G +N DGR I K+ + T+K++L + S I+ G+ GG N Sbjct: 3 HITRFETPWFLVISKKQYKWTVRPNAGPHPIEKSIPLAVVIRDYLKLAETVREAKHIIFDGKVLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVIPDNVRFMRLSKISADEAHYKYVRIMNKTTVKGGSIQLNLEDGRNILVDKETAKSFKTLMTLKIELPSQNIVDSFIISEGSYAIFVGGKN 186
BLAST of EY675933 vs. ExPASy Swiss-Prot
Match: RS4E_SULIA (30S ribosomal protein S4e OS=Sulfolobus islandicus (strain M.16.27) GN=rps4e PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.055e-20 Identity = 61/184 (33.15%), Postives = 94/184 (51.09%), Query Frame = 3 Query: 84 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANE---TIKLDLKKTRTLTSSILMLGNIVRVTGG*N 626 H+ R P ++ K + +P++GPH + +PL +V+R+ LK A T RE I+ VLVDGKVR D YP G MD+VSIP + FR++ D RL + +EA +K ++ + + G +N DGR I K+ + T+K++L + S I+ G+ GG N Sbjct: 3 HITRFETPWFLVISKKQYKWTVRPNAGPHPIEKSIPLAVVIRDYLKLAETVREAKHIIFDGKVLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVIPDNVRFMRLSKISADEAHYKYVRIMNKTTVKGGSIQLNLEDGRNILVDKETAKSFKTLMTLKIELPSQNIVDSFIISEGSYAIFVGGKN 186
BLAST of EY675933 vs. ExPASy Swiss-Prot
Match: RS4E_IGNH4 (30S ribosomal protein S4e OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps4e PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.800e-20 Identity = 60/157 (38.22%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 63 MAR--GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLL-YDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP 518 MAR G K+HLKRL AP W + + +A KP GPH E +PL++++R+ L YA T RE ++ + + VDG+VR D +P G MDV+ I +E +R++ Y K + + EEAK K+C++ + + G +N +DGR IR DP Sbjct: 1 MARVGGGKRHLKRLAAPAFWPIHRKEAVWAVKPRPGPHPIEESIPLLILVRDVLGYAETSREARKLIAEGRIKVDGRVRKDYKFPVGAMDVIEIVGADEYYRMIPYPVKYLVPMR-IDAEEAKKKICRIENKVTVKGGHVQLNLHDGRNVLIRVEDP 156
BLAST of EY675933 vs. ExPASy Swiss-Prot
Match: RS4E_SULSO (30S ribosomal protein S4e OS=Sulfolobus solfataricus GN=rps4e PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.070e-20 Identity = 62/184 (33.70%), Postives = 94/184 (51.09%), Query Frame = 3 Query: 84 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI---RYPDPLIKANETIKLDLKKTRTLTSSILMLGNIVRVTGG*N 626 H+ R AP M+ K + +P++GPH + +PL +V+R+ LK A T RE I+ VLVDGKVR D YP G MD+VSIP + FR+L D R + +EA++K ++ + ++G +N DGR I + K T+K++L + L S + + GG N Sbjct: 3 HITRFEAPWFLMISKKQYKWTVRPNAGPHSIEKSIPLAVVIRDYLKLAGTIREAKHIIFDGKVLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVLPDNVRFMRFSKISADEARYKYVRIINKTTIKEGRIQLNLEDGRNILVDKETAKNFKTLMTLKIELPSQQILDSFTISERSYAIFVGGRN 186
BLAST of EY675933 vs. ExPASy Swiss-Prot
Match: RS4E_METAC (30S ribosomal protein S4e OS=Methanosarcina acetivorans GN=rps4e PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.070e-20 Identity = 62/184 (33.70%), Postives = 90/184 (48.91%), Query Frame = 3 Query: 84 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANE-----TIKLDLKKTRTLTSSILMLGNIVRVTGG 620 H KRL+ PK W + K G + GPH LPL +++R+ LK RE IL + VLVDG R D +P G DV+++P NE +R+L D KGR LH L + KLC++ + + G +N DG I I +NE ++ L + + + +GN+ V GG Sbjct: 3 HQKRLSVPKSWKVGKKGNKWISTTRPGPHSQARSLPLGIIIRDILKLVDNSREGKRILSEGKVLVDGIPRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLTLHKLNETNVN-KLCRINNKTTVKGGKFQLNLNDGTNI------IGSNEYGTKDSLILSIPDKQVVKHLKFEVGNLAMVVGG 179
BLAST of EY675933 vs. ExPASy Swiss-Prot
Match: RS4E_PYRAE (30S ribosomal protein S4e OS=Pyrobaculum aerophilum GN=rps4e PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.524e-19 Identity = 65/183 (35.52%), Postives = 92/183 (50.27%), Query Frame = 3 Query: 84 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR---TIRYPDPLIKANETIKLDLKKTRTLTSSILMLG-NIVRVTG 617 HL+R AP W + K GG + +PS GPH LPL L++R+ LKYA T E I+ + +V VDG VR D +P G MDV+ I T E +R++ D + L + EEA KL +V + G ++ +DGR T IK +++ DL+ L LG N V + G Sbjct: 3 HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIISRGYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVEGKTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVVIHG 185
BLAST of EY675933 vs. ExPASy Swiss-Prot
Match: RS4E_METBF (30S ribosomal protein S4e OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps4e PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.394e-19 Identity = 58/179 (32.40%), Postives = 85/179 (47.49%), Query Frame = 3 Query: 84 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANETIKLDLKKTRTLTSSILMLGNIVRVTGG 620 H KRL+ P+ W K G + GPH LPL +++R+ LK RE IL + VLVDG R D +P G DV+++P NE +R+ D KGR LH L KLC++ + + G +N DG I + +++ L L + + +GN+ V GG Sbjct: 3 HQKRLSIPRSWKAGKKGYKWVSTTRPGPHSQARSLPLGIIIRDILKLVDNSREGKRILSEGKVLVDGIPRKDLRFPVGLFDVITLPLVNETYRMFQDEKGRLALHKLNATNVN-KLCRINNKTTLKGGKVQLNLNDGTNILGSNE-YSTKDSLILSLPDKQIVKHLQFKVGNLAMVVGG 179
BLAST of EY675933 vs. ExPASy Swiss-Prot
Match: RS4E_METMA (30S ribosomal protein S4e OS=Methanosarcina mazei GN=rps4e PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.433e-19 Identity = 58/179 (32.40%), Postives = 87/179 (48.60%), Query Frame = 3 Query: 84 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANETIKLDLKKTRTLTSSILMLGNIVRVTGG 620 H KRL+ PK W + + G + GPH LPL L++R+ LK RE IL + VLVDG R D +P G DV+++P NE +R+L D KGR L+ L + KLC++ + + G +N DG I + +++ L + + +GN+ V GG Sbjct: 3 HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSEGKVLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLNETNVN-KLCRINNKTTVKGGKIQLNLNDGTNILGSND-YGTKDSLILSIPDKHVVKHLKFEVGNLAMVIGG 179
BLAST of EY675933 vs. ExPASy Swiss-Prot
Match: RS4E_SULTO (30S ribosomal protein S4e OS=Sulfolobus tokodaii GN=rps4e PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 3.753e-18 Identity = 56/186 (30.11%), Postives = 93/186 (50.00%), Query Frame = 3 Query: 84 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI-----RYPDPLIKANETIKLDLKKTRTLTSSILMLGNIVRVTGG*N 626 H+ R AP L K + + + GPHK E +PL L+L++ L A T RE ++++ ++VDG+VR D +P G MDV+SIP ++ FR++ D + E+AK+K ++ + + G +N DGR I + P+ T+K+++ + S L G + GG N Sbjct: 3 HITRFEAPWFLNLSKKEYKWTIRANPGPHKLSESIPLALLLKHYLNVAETTREAKRLVVEGKIMVDGRVRKDYKFPVGLMDVISIPSSDLYFRIVPDNIKYLMPVKISKEDAKYKFVRIVNKTTNKNGNIQLNLEDGRNILIPKEKVPEMNYPTLTTLKIEIPSQNIIKSYELSEGKYAIIIGGRN 188 The following BLAST results are available for this feature:
BLAST of EY675933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675933 ID=EY675933; Name=EY675933; organism=Citrus sinensis; type=EST; length=908bpback to top |