EY675873

Overview
NameEY675873
Unique NameEY675873
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.383e-23
Identity = 61/132 (46.21%), Postives = 79/132 (59.85%), Query Frame = 3
Query:   96 DPNLSFLQPMESEFPVIKSEPDSPTFCEIIKPEPLDITCLGSSNWTESPQKSSEPKLADTEER-KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSP 488
            +P+ S      S FP +K E  +P     +   P+              +K+S    A T  + KHYRGVR+RPWGK+AAEIRDPA+ G+RVWLGTF++  DAA AYD AAFRMRG +A+LNFPL   +  P
Sbjct:   96 EPSSSSSDEDRSSFPSVKIE--TPESFAAVDSVPV------------KKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEP 213          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.057e-23
Identity = 52/107 (48.60%), Postives = 72/107 (67.29%), Query Frame = 3
Query:  237 SPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSP-PAKNSRERKKEKTRDLQESPTS 554
            +P   +    A   + +HYRGVR+RPWGK+AAEIRDPA+ G+RVWLGT+++  +AA AYD AA+RMRG KA+LNFP   G + P P + + +R+  +      SP S
Sbjct:   85 APPAETTTAQAVVPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLTVKRRSPEPASSSISPAS 191          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.635e-22
Identity = 60/135 (44.44%), Postives = 76/135 (56.30%), Query Frame = 3
Query:  219 SSNWTESPQKSSEPKLADTEE----------------------RKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSP-PAKNSRERKKEKTRDLQESPTS 554
            S  WT S   S E KL   EE                       +HYRGVR+RPWGK+AAEIRDPA+ G+RVWLGT++S  +AA AY  AAFRMRG KA+LNFP   G + P P + + +R+  ++     S  S
Sbjct:   61 SIGWTPSNLTSEEVKLEPREEIEPAMSTSVSPPTVAPAALQPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFPHRIGLNEPEPVRVTVKRRLSESASSSVSSAS 195          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.442e-22
Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 3
Query:  144 IKSEPDSPTFCEIIKPEPLDITCLGSSNWTESPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSP-PAKNSRERK 515
            IK+EP      E I+P  + +  +     T + Q       A   + +HYRGVR+RPWGK+AAEIRDPA+ G+RVWLGT+++  +AA AYD AA+RMRG KA+LNFP   G + P P + + +R+
Sbjct:   62 IKAEPR-----EEIEPATIPVPSVAPPAETTTAQ-------AVVPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLTAKRR 174          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.805e-21
Identity = 56/115 (48.70%), Postives = 81/115 (70.43%), Query Frame = 3
Query:  204 ITCLGSSNWTESPQKSSEPKLADTEERKH-YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRERKKEKTRDLQES 545
            I  +GS+   ++ + + + + +   +RK+ YRG+R+RPWGK+AAEIRDP RKGSR WLGTFD+  +AA+AYD+AA R+RG KA +NFP E      P+  S++R   KT +LQ+S
Sbjct:   98 IYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDP-RKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKN----PSVVSQKRPSAKTNNLQKS 207          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.805e-21
Identity = 48/62 (77.42%), Postives = 53/62 (85.48%), Query Frame = 3
Query:  285 KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 470
            K YRGVRRRPWGKYAAEIRD AR G+RVWLGTF++  +AA AYD AAFRMRG KA+LNFP E
Sbjct:   57 KKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSE 118          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.107e-20
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 3
Query:  270 DTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 470
            +T E K YRGVR+RPWGKYAAEIRD AR G+RVWLGTF++  DAA+AYD AAF MRG++AILNFP E
Sbjct:    8 NTNEMK-YRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPHE 73          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.888e-20
Identity = 55/125 (44.00%), Postives = 73/125 (58.40%), Query Frame = 3
Query:  219 SSNWTES------PQKSSEPKL-------ADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRERKKEKTRDLQESPTS 554
            SS WT S      P + ++P         A  ++   YRGVRRRPWGK+AAEIRDP + G+RVWLGT+++  DAA AYD AAF++RG KA LNFP   G+        R R++     + +  TS
Sbjct:   55 SSGWTPSVPPVTSPAEENKPPATKASGSHAPRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSCKYEPVRIRPRRRSPEPSVSDQLTS 179          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.888e-20
Identity = 50/79 (63.29%), Postives = 58/79 (73.42%), Query Frame = 3
Query:  279 ERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE----AGADSPPAKNS 503
            E+  YRGVRRRPWGKYAAEIRD  + G RVWLGTFD+  DAA+AYD AA+ MRG+ AILNFP E     G+ S  A +S
Sbjct:   16 EQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHEYNMGTGSSSTAANSS 94          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.466e-20
Identity = 47/79 (59.49%), Postives = 62/79 (78.48%), Query Frame = 3
Query:  234 ESPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 470
            ES  +SS  +  D ++ + +RGVRRRPWGK+AAEIRDP+R G+R+WLGTF++  +AA+AYD AAF +RG  AILNFP E
Sbjct:    2 ESSNRSSNNQSQDDKQAR-FRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPNE 79          
The following BLAST results are available for this feature:
BLAST of EY675873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
EF100_ARATH2.383e-2346.21Ethylene-responsive transcription factor 1A OS=Ara... [more]
ERF2_NICSY9.057e-2348.60Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF1_SOLLC2.635e-2244.44Ethylene-responsive transcription factor 1 OS=Sola... [more]
ERF2_TOBAC3.442e-2245.60Ethylene-responsive transcription factor 2 OS=Nico... [more]
RAP22_ARATH3.805e-2148.70Ethylene-responsive transcription factor RAP2-2 OS... [more]
PTI5_SOLLC3.805e-2177.42Pathogenesis-related genes transcriptional activat... [more]
ERF95_ARATH1.107e-2073.13Ethylene-responsive transcription factor ERF095 OS... [more]
ERF99_ARATH1.888e-2044.00Ethylene-responsive transcription factor 13 OS=Ara... [more]
ERF97_ARATH1.888e-2063.29Ethylene-responsive transcription factor 14 OS=Ara... [more]
ERF98_ARATH2.466e-2059.49Ethylene-responsive transcription factor ERF098 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675873 ID=EY675873; Name=EY675873; organism=Citrus sinensis; type=EST; length=943bp
CTCATTAACATGTCCCCATGACAACGTTGGAAGAAGAATCATCCATCCTG
GAATTCCTTCGCCAGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCC
AAATCTCTCTTTTCTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAAT
CCGAACCCGACTCCCCTACCTTTTGTGAAATAATAAAACCTGAACCATTG
GACATAACGTGTTTGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGAG
TTCGGAGCCGAAGCTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAG
TAAGAAGAAGGCCGTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCA
AGAAAGGGCAGCAGGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGC
TGCTAAAGCTTATGATTCTGCTGCCTTCCGGATGAGGGGGCGCAAAGCAA
TCTTGAATTTCCCTCTGGAGGCTGGGGCTGATAGCCCTCCAGCAAAGAAC
AGTAGGGAAAGAAAAAAAGAGAAGACACGGGATTTGCAAGAATCACCCAC
CTCAATTACCTAGAAAAATAAGAACCCTTCCCCAAATCCAGGGCCCCCAA
AGGGAAAGGGGCTGGTTATTACCCTTAGGAAAAATTGAATTTTGGCCCCC
CAAAAAAAAAAAAAAGGGGTCTGGGGTTTCCCTTTTAAAAAGTTGGACTG
GGGGGGGCCCCCCAAAAAACCCAAAACCGGGGAAAAATTTTGGGGGTTAA
CCGGGAAAGAAAAAAATTTTTTGGTAACTTTTGTCTATTAATTAAAAACT
TGCGCCGTTTCGGAAAAGGGGGGATTTTTTTTTAAAAAAAAAAAAACACA
AGAGGAAGTTGTCTTGGGGGTGTGGTGGGCTTTTTTTTTTGTTTTTTTTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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