EY675873

Overview
NameEY675873
Unique NameEY675873
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.570e-11
Identity = 31/63 (49.21%), Postives = 45/63 (71.43%), Query Frame = 3
Query:  276 EERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            +  + ++G+R R WGK+ AEIR+P  K SR+WLG++ +   AA+AYD+A F +RG  A LNFP
Sbjct:   16 KRERPFKGIRMRKWGKWVAEIREP-NKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFP 77          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF88_ARATH (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana GN=ERF088 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.662e-11
Identity = 40/74 (54.05%), Postives = 46/74 (62.16%), Query Frame = 3
Query:  252 SEPKLADTEERK----HYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 461
            S  K    EE+K     Y GVRRRPWG+YAAEIR+P  K  R WLGTFD+  +AA AYD AA  + G  A  NF
Sbjct:    4 SSNKRKSKEEKKLQEGKYLGVRRRPWGRYAAEIRNPFTK-ERHWLGTFDTAEEAAFAYDVAARSISGSLATTNF 76          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: DRE2C_ARATH (Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana GN=DREB2C PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.662e-11
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 3
Query:  291 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            YRGVR+R WGK+ AEIR+P   G+R+WLGTF S  +AA AYD AA  + G+ A LN P
Sbjct:   72 YRGVRQRRWGKWVAEIREPDG-GARLWLGTFSSSYEAALAYDEAAKAIYGQSARLNLP 128          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.089e-11
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 3
Query:  285 KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPL---EAGADSPPAKNS 503
            + +RGVR+R WG + +EIR P  K  RVWLGTF++   AA+AYD AA  M G+ A  NFP+   E G+D     NS
Sbjct:    5 RKFRGVRQRQWGSWVSEIRHPLLK-RRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPVVKSEEGSDHVKDVNS 79          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.089e-11
Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 3
Query:  246 KSSEPKLADTEERK------HYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            K  + +  D ++ K      ++RGVR R WGK+ +EIR+P +K SR+WLGTF +   AA+A+D AA  ++G  A LNFP
Sbjct:   24 KPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKK-SRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFP 101          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF018 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.952e-11
Identity = 34/80 (42.50%), Postives = 52/80 (65.00%), Query Frame = 3
Query:  255 EPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPA 494
            E K  +T  +  Y+GVR+R WGK+ +EIR P  +  R+WLG++D+   AA+A+D+A F +RG  A  NFP     ++PP+
Sbjct:    9 EEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSR-ERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNFP-----NNPPS 82          
The following BLAST results are available for this feature:
BLAST of EY675873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
ERF11_ARATH3.570e-1149.21Ethylene-responsive transcription factor ERF011 OS... [more]
ERF88_ARATH4.662e-1154.05Ethylene-responsive transcription factor ERF088 OS... [more]
DRE2C_ARATH4.662e-1158.62Dehydration-responsive element-binding protein 2C ... [more]
SHN2_ARATH6.089e-1148.68Ethylene-responsive transcription factor SHINE 2 O... [more]
ERF38_ARATH6.089e-1144.30Ethylene-responsive transcription factor ERF038 OS... [more]
ERF18_ARATH7.952e-1142.50Ethylene-responsive transcription factor ERF018 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675873 ID=EY675873; Name=EY675873; organism=Citrus sinensis; type=EST; length=943bp
CTCATTAACATGTCCCCATGACAACGTTGGAAGAAGAATCATCCATCCTG
GAATTCCTTCGCCAGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCC
AAATCTCTCTTTTCTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAAT
CCGAACCCGACTCCCCTACCTTTTGTGAAATAATAAAACCTGAACCATTG
GACATAACGTGTTTGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGAG
TTCGGAGCCGAAGCTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAG
TAAGAAGAAGGCCGTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCA
AGAAAGGGCAGCAGGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGC
TGCTAAAGCTTATGATTCTGCTGCCTTCCGGATGAGGGGGCGCAAAGCAA
TCTTGAATTTCCCTCTGGAGGCTGGGGCTGATAGCCCTCCAGCAAAGAAC
AGTAGGGAAAGAAAAAAAGAGAAGACACGGGATTTGCAAGAATCACCCAC
CTCAATTACCTAGAAAAATAAGAACCCTTCCCCAAATCCAGGGCCCCCAA
AGGGAAAGGGGCTGGTTATTACCCTTAGGAAAAATTGAATTTTGGCCCCC
CAAAAAAAAAAAAAAGGGGTCTGGGGTTTCCCTTTTAAAAAGTTGGACTG
GGGGGGGCCCCCCAAAAAACCCAAAACCGGGGAAAAATTTTGGGGGTTAA
CCGGGAAAGAAAAAAATTTTTTGGTAACTTTTGTCTATTAATTAAAAACT
TGCGCCGTTTCGGAAAAGGGGGGATTTTTTTTTAAAAAAAAAAAAACACA
AGAGGAAGTTGTCTTGGGGGTGTGGTGGGCTTTTTTTTTTGTTTTTTTTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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