EY675873

Overview
NameEY675873
Unique NameEY675873
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.143e-18
Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 3
Query:  240 PQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP--LEAGADSPPAKNSRERKKEKTRDLQESPTSI 557
            P  ++  +  +  +   YRGVR+RPWG+YAAEIRDP +K +RVWLGTFD+  +AA+AYD+AA   RG KA  NFP  LE      P   +R   +  T D    PT +
Sbjct:    8 PDPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKK-TRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCASPPTLV 114          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.143e-18
Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 3
Query:  261 KLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRERKKEKTRDLQESPT 551
            K A  + +  +RG+R+RPWGK+AAEIRDP RKG RVWLGTF+S  +AA+AYD+ A R+RG+KA +NFP EA   +   +      K     +++ PT
Sbjct:  110 KSAKRKRKNQFRGIRQRPWGKWAAEIRDP-RKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFP-EAPTTAQKRRAGSTTAKAPKSSVEQKPT 204          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.772e-18
Identity = 42/67 (62.69%), Postives = 55/67 (82.09%), Query Frame = 3
Query:  291 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPP 491
            +RGVR+RPWG++AAEIRDP +K +RVWLGTFDS  +AA+AYDSAA  +RG KA  NFP+++ +  PP
Sbjct:   28 FRGVRKRPWGRFAAEIRDPWKK-ARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPPP 93          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.772e-18
Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 3
Query:  150 SEPDSPTFCEIIKPEPLDITCLGSSNWTESPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            SE D   F   +  +P+  +    S+     +KS+         +++YRGVR+RPWGK+AAEIRDP  K +RVWLGTFD+  +AA AYD AAF  RG KA LNFP
Sbjct:   30 SESDVSDFVSELTGQPIPSSIDDQSSSLTLQEKSNS-------RQRNYRGVRQRPWGKWAAEIRDP-NKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFP 126          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.146e-17
Identity = 42/70 (60.00%), Postives = 57/70 (81.43%), Query Frame = 3
Query:  261 KLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 470
            K A+ + +  YRG+R+RPWGK+AAEIRDP R+G+R+WLGTF +  +AA+AYD+AA R+RG KA +NFP E
Sbjct:  115 KSANRKRKNQYRGIRQRPWGKWAAEIRDP-REGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEE 183          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.146e-17
Identity = 49/131 (37.40%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  183 IKPEPLDITCLGSSNWTESPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRERKK------EKTRDLQESPTSI 557
            +K    +I  + S+      ++ S    +D   RK +RGVR+RPWG++AAEIRDP R G RVWLGT+D+  +AA  YD AA +++G  A+ NFP+   A+        E +       +   D+  SPTS+
Sbjct:   62 VKRHVTEINLMPSTKSIGDRKRRSVSPDSDVTRRKKFRGVRQRPWGRWAAEIRDPTR-GKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAEVTVTVTETETESVADGGDKSENDVALSPTSV 191          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.146e-17
Identity = 42/65 (64.62%), Postives = 52/65 (80.00%), Query Frame = 3
Query:  270 DTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            D   R+HYRGVR+RPWGK+AAEIRDP +K +RVWLGTF++  +AA AYD AA + +G KA LNFP
Sbjct:   32 DQPRRRHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFP 95          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.954e-17
Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 3
Query:  276 EERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADS 485
            E  K YRGVR+RPWGK+AAEIRDP  K +RVWLGTF++   AA+AYD+AA R RG KA LNFP   G  +
Sbjct:   56 ERPKKYRGVRQRPWGKWAAEIRDP-HKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVGTQT 124          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.954e-17
Identity = 42/59 (71.19%), Postives = 49/59 (83.05%), Query Frame = 3
Query:  291 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPL 467
            YRGVRRRPWG+YAAEIRDP +K  RVWLG+F++  +AA+AYDSAA R RG KA  NFPL
Sbjct:   53 YRGVRRRPWGRYAAEIRDPVKK-KRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFPL 110          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.552e-17
Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 3
Query:  234 ESPQKSSEPKLADTEE--RKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP--LEAGADS 485
            + P +   P   D  +  R+HYRGVR+RPWGK+AAEIRDP +K +RVWLGTF++   AA AYD AA + +G KA LNFP  ++ G++S
Sbjct:   69 QDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQLGSNS 155          
The following BLAST results are available for this feature:
BLAST of EY675873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
ERF78_ARATH5.143e-1845.37Ethylene-responsive transcription factor 4 OS=Arab... [more]
ERF1_ORYSJ5.143e-1848.45Ethylene-responsive transcription factor 1 OS=Oryz... [more]
ERF82_ARATH8.772e-1862.69Ethylene-responsive transcription factor 3 OS=Arab... [more]
EF112_ARATH8.772e-1847.62Ethylene-responsive transcription factor ERF112 OS... [more]
RA212_ARATH1.146e-1760.00Ethylene-responsive transcription factor RAP2-12 O... [more]
PTI6_SOLLC1.146e-1737.40Pathogenesis-related genes transcriptional activat... [more]
EF113_ARATH1.146e-1764.62Ethylene-responsive transcription factor ERF113 OS... [more]
RAP26_ARATH1.954e-1762.86Ethylene-responsive transcription factor RAP2-6 OS... [more]
ERF77_ARATH1.954e-1771.19Ethylene-responsive transcription factor 10 OS=Ara... [more]
EF114_ARATH2.552e-1752.27Ethylene-responsive transcription factor ERF114 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675873 ID=EY675873; Name=EY675873; organism=Citrus sinensis; type=EST; length=943bp
CTCATTAACATGTCCCCATGACAACGTTGGAAGAAGAATCATCCATCCTG
GAATTCCTTCGCCAGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCC
AAATCTCTCTTTTCTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAAT
CCGAACCCGACTCCCCTACCTTTTGTGAAATAATAAAACCTGAACCATTG
GACATAACGTGTTTGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGAG
TTCGGAGCCGAAGCTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAG
TAAGAAGAAGGCCGTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCA
AGAAAGGGCAGCAGGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGC
TGCTAAAGCTTATGATTCTGCTGCCTTCCGGATGAGGGGGCGCAAAGCAA
TCTTGAATTTCCCTCTGGAGGCTGGGGCTGATAGCCCTCCAGCAAAGAAC
AGTAGGGAAAGAAAAAAAGAGAAGACACGGGATTTGCAAGAATCACCCAC
CTCAATTACCTAGAAAAATAAGAACCCTTCCCCAAATCCAGGGCCCCCAA
AGGGAAAGGGGCTGGTTATTACCCTTAGGAAAAATTGAATTTTGGCCCCC
CAAAAAAAAAAAAAAGGGGTCTGGGGTTTCCCTTTTAAAAAGTTGGACTG
GGGGGGGCCCCCCAAAAAACCCAAAACCGGGGAAAAATTTTGGGGGTTAA
CCGGGAAAGAAAAAAATTTTTTGGTAACTTTTGTCTATTAATTAAAAACT
TGCGCCGTTTCGGAAAAGGGGGGATTTTTTTTTAAAAAAAAAAAAACACA
AGAGGAAGTTGTCTTGGGGGTGTGGTGGGCTTTTTTTTTTGTTTTTTTTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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