EY675873

Overview
NameEY675873
Unique NameEY675873
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.829e-15
Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 3
Query:  258 PKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRERKKEKTRDLQE 542
            P +  T  RK +RGVR+RPWGK+AAEIRDP+R+  RVWLGTFD+  +AA  YD+AA ++RG  A LNFP       PP   + E    + + + +
Sbjct:   77 PVVVTTATRK-FRGVRQRPWGKWAAEIRDPSRR-VRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP------PPPVTENVEEASTEVKGVSD 163          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.120e-15
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 3
Query:  291 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNS 503
            YRGVR+RPWG+YAAEIRDP +K +RVWLGTFD+   AA+AYD+AA   RG KA  NF +  G  S P ++S
Sbjct:   31 YRGVRKRPWGRYAAEIRDPVKK-TRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNFGVIVG--SSPTQSS 98          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.951e-15
Identity = 42/97 (43.30%), Postives = 63/97 (64.95%), Query Frame = 3
Query:  273 TEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF---PLEAGADSPPAKNSRERKKEKTRDLQESPTS 554
            T   K +RGVR+RPWGK+AAEIRDP ++  R+WLGT+++  +AA  YD+AA ++RG  A+ NF   P  A     P  +  ++KK+K    ++S T+
Sbjct:  116 TTGEKKFRGVRQRPWGKWAAEIRDPLKR-VRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTA 211          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.186e-14
Identity = 44/76 (57.89%), Postives = 47/76 (61.84%), Query Frame = 3
Query:  291 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRERKK 518
            YRGVRRRPWG+YAAEIRDP  K  R WLGTFD+   AA AYDSAA   RG KA  NF        P  + S   KK
Sbjct:   57 YRGVRRRPWGRYAAEIRDPMSK-ERRWLGTFDTAEQAACAYDSAARAFRGAKARTNFTYPTAVIMPEPRFSFSNKK 131          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.186e-14
Identity = 55/137 (40.15%), Postives = 78/137 (56.93%), Query Frame = 3
Query:  123 MESEFPVIKSEPDSPTFCEIIKPEPLDI-TCLGSSNWTESPQKSSEPKLADTEER--KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP-LEAGADSPPAKNSRERKKE 521
            ME+  P IKS  +  +      P P+   + L S +   SP+  S  +   +  +  K YRGVR+R WGK+ AEIR P R  +R+WLGTFD+  +AA AYD AA+++RG  A LNFP L    +  P ++S + K E
Sbjct:   24 MEALLPFIKSPSNDSSAFAFSLPAPISYGSDLHSFSHHLSPKPVSMKQTGTSAAKPTKLYRGVRQRHWGKWVAEIRLP-RNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPDLRHNDEYQPLQSSVDAKLE 159          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.186e-14
Identity = 51/146 (34.93%), Postives = 75/146 (51.37%), Query Frame = 3
Query:  144 IKSEPDSPTFCEIIKPEPLDITCLGSSNWTESPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE------AGADSPPAKNSRERKKEKTRDLQ--ESPTSI 557
            I+ EP S +  ++      D   +   +  + P  S +        +K YRGVR+RPWGK+AAEIRDP ++  R+WLGTF +  +AA  YD+AA ++RG  A+ NF ++         +  P  N      E   D Q   SPTS+
Sbjct:   75 IRVEPSSSSTGDVSASPTKDRKRINVDSTVQKPSVSGQ-------NQKKYRGVRQRPWGKWAAEIRDPEQR-RRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMSVSISESMDDSQHLSSPTSV 212          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.022e-14
Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 3
Query:  234 ESPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNS 503
            E+ ++  +P + D+ +   YRGVR+R WGK+ +EIR+P RK SR+WLGTF S   AA+A+D AA  ++G  AILNFP  AG+   P+  S
Sbjct:   18 ENEEEKKKP-VKDSGKHPVYRGVRKRNWGKWVSEIREP-RKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLS 105          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: RAP21_ARATH (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.641e-14
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 3
Query:  282 RKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            RK YRG+RRR WGK+ AEIR+P  K SR+WLG++ +D+ AA+AYD A F +RG  A LNFP
Sbjct:   28 RKPYRGIRRRKWGKWVAEIREP-NKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFP 87          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.505e-14
Identity = 41/93 (44.09%), Postives = 60/93 (64.52%), Query Frame = 3
Query:  210 CLGSSNWTESPQKSS---------EPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 461
            C G S+ + + +K           E  ++ + + K YRGVR+RPWGK+AAEIRDP+ + +R+WLGTF +  +AA AYD AA  ++G KA+ NF
Sbjct:   69 CQGESSSSTAARKGKHKEEESVVVEDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPSSR-TRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNF 160          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.884e-14
Identity = 43/84 (51.19%), Postives = 52/84 (61.90%), Query Frame = 3
Query:  249 SSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKN 500
            S   K  D +    + GVRRRPWG+YAAEIRDP  K  R WLGTFD+  +AA AYD AA  MRG +A  NF     +D PP+ +
Sbjct:    6 SKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAEEAALAYDRAARSMRGTRARTNF---VYSDMPPSSS 85          
The following BLAST results are available for this feature:
BLAST of EY675873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
CRF1_ARATH1.829e-1547.37Ethylene-responsive transcription factor CRF1 OS=A... [more]
ERF79_ARATH3.120e-1560.56Ethylene-responsive transcription factor 8 OS=Arab... [more]
CRF2_ARATH6.951e-1543.30Ethylene-responsive transcription factor CRF2 OS=A... [more]
ESR1_ARATH1.186e-1457.89Ethylene-responsive transcription factor ESR1 OS=A... [more]
ERF58_ARATH1.186e-1440.15Ethylene-responsive transcription factor ERF058 OS... [more]
CRF4_ARATH1.186e-1434.93Ethylene-responsive transcription factor CRF4 OS=A... [more]
TINY_ARATH2.022e-1447.78Ethylene-responsive transcription factor TINY OS=A... [more]
RAP21_ARATH2.641e-1460.66Ethylene-responsive transcription factor RAP2-1 OS... [more]
CRF6_ARATH4.505e-1444.09Ethylene-responsive transcription factor CRF6 OS=A... [more]
LEP_ARATH5.884e-1451.19Ethylene-responsive transcription factor LEP OS=Ar... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675873 ID=EY675873; Name=EY675873; organism=Citrus sinensis; type=EST; length=943bp
CTCATTAACATGTCCCCATGACAACGTTGGAAGAAGAATCATCCATCCTG
GAATTCCTTCGCCAGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCC
AAATCTCTCTTTTCTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAAT
CCGAACCCGACTCCCCTACCTTTTGTGAAATAATAAAACCTGAACCATTG
GACATAACGTGTTTGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGAG
TTCGGAGCCGAAGCTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAG
TAAGAAGAAGGCCGTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCA
AGAAAGGGCAGCAGGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGC
TGCTAAAGCTTATGATTCTGCTGCCTTCCGGATGAGGGGGCGCAAAGCAA
TCTTGAATTTCCCTCTGGAGGCTGGGGCTGATAGCCCTCCAGCAAAGAAC
AGTAGGGAAAGAAAAAAAGAGAAGACACGGGATTTGCAAGAATCACCCAC
CTCAATTACCTAGAAAAATAAGAACCCTTCCCCAAATCCAGGGCCCCCAA
AGGGAAAGGGGCTGGTTATTACCCTTAGGAAAAATTGAATTTTGGCCCCC
CAAAAAAAAAAAAAAGGGGTCTGGGGTTTCCCTTTTAAAAAGTTGGACTG
GGGGGGGCCCCCCAAAAAACCCAAAACCGGGGAAAAATTTTGGGGGTTAA
CCGGGAAAGAAAAAAATTTTTTGGTAACTTTTGTCTATTAATTAAAAACT
TGCGCCGTTTCGGAAAAGGGGGGATTTTTTTTTAAAAAAAAAAAAACACA
AGAGGAAGTTGTCTTGGGGGTGTGGTGGGCTTTTTTTTTTGTTTTTTTTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top