EY675873

Overview
NameEY675873
Unique NameEY675873
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF54_ARATH (Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana GN=ERF054 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.884e-14
Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 3
Query:  243 QKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            Q++ +P +A     K YRGVR+R WGK+ AEIR P R  +R+WLGTFD+  +AA AYD  AF++RG  A LNFP
Sbjct:  131 QEAVQPYIAT----KLYRGVRQRQWGKWVAEIRKP-RSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNFP 199          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.884e-14
Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = 3
Query:  177 EIIKPEPLDITCLGSSNWTESPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            +I+K  P     + +    ES    + P +      K YRGVR+R WGK+ AEIR P R  +R+WLGTFD+  +AA AYD  AF++RG  A LNFP
Sbjct:  149 DILKLSPSGRMMMMNMLRQESDLPLTRPPVQPFSATKLYRGVRQRHWGKWVAEIRKP-RNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFP 243          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.884e-14
Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = 3
Query:  291 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRE 509
            YRGVR+R WGK+ +EIR+P  K +R+WLG+F++   AA AYD AAF  RGR+A LNFP  A +   PA +S +
Sbjct:   24 YRGVRKRKWGKWVSEIREPGTK-NRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPELASSLPRPADSSSD 95          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ESR2_ARATH (Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana GN=ESR2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.685e-14
Identity = 40/57 (70.18%), Postives = 43/57 (75.44%), Query Frame = 3
Query:  291 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 461
            YRGVRRRPWG+YAAEIRDP  K  R WLGTFD+  +AA AYD AA  MRG KA  NF
Sbjct:   58 YRGVRRRPWGRYAAEIRDPLSK-ERRWLGTFDTAEEAACAYDCAARAMRGLKARTNF 113          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 3
Query:  249 SSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            SS+ K   T+E+  YRG R R WGK+ +EIR+P RK SR+WLGTF +   AA+A+D AA  ++G  AILNFP
Sbjct:   12 SSKKKKEKTKEKGVYRGARMRSWGKWVSEIREP-RKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFP 82          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: RAP29_ARATH (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.712e-13
Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 3
Query:  231 TESPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGAD 482
            TE P+++    L  + E K Y+G+R R WGK+ AEIR+P  K SR+WLG++ + V AA+AYD+A F +RG  A LNFP E   D
Sbjct:   21 TEKPKRN----LISSNE-KRYKGIRMRKWGKWVAEIREP-NKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEEVFKD 98          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.712e-13
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  267 ADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 470
            + T     Y GVR+R WGK+ +EIR+P RK SR+WLG+F     AAKAYD AAF ++GRKA LNFP E
Sbjct:   37 SSTTRHPVYHGVRKRRWGKWVSEIREP-RKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEE 103          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.712e-13
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 3
Query:  234 ESPQKSSEPKLADTEER-KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSP 488
            +SP  SS  K A  + + K YRGVR+R WGK+ +EIR P + G R+WLG++D+   AA+AYD+A F +RG K + NFP +     P
Sbjct:    7 KSPFISSSLKGAHEDRKFKCYRGVRKRSWGKWVSEIRVP-KTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDKKPQLP 91          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF62_ARATH (Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana GN=ERF062 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.920e-13
Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  240 PQKSSEPKLADTEE-RKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            P KS   K+  T    K YRGVR+R WGK+ AEIR P R  +RVWLGTF++   AA AYD+AA+ +RG  A LNFP
Sbjct:  214 PMKSKTRKVVQTTTPTKLYRGVRQRHWGKWVAEIRLP-RNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFP 288          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.920e-13
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 3
Query:  285 KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            K YRGVR+R WGK+ AEIR P R  +R+WLGTFD+  +AA AYD AAF++RG  A LNFP
Sbjct:  141 KLYRGVRQRHWGKWVAEIRLP-RNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFP 199          
The following BLAST results are available for this feature:
BLAST of EY675873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
ERF54_ARATH5.884e-1454.05Ethylene-responsive transcription factor ERF054 OS... [more]
ERF53_ARATH5.884e-1444.79Ethylene-responsive transcription factor ERF053 OS... [more]
ERF21_ARATH5.884e-1453.42Ethylene-responsive transcription factor ERF021 OS... [more]
ESR2_ARATH7.685e-1470.18Ethylene-responsive transcription factor ESR2 OS=A... [more]
ERF42_ARATH1.004e-1354.17Ethylene-responsive transcription factor ERF042 OS... [more]
RAP29_ARATH1.712e-1348.81Ethylene-responsive transcription factor RAP2-9 OS... [more]
ERF23_ARATH1.712e-1357.35Ethylene-responsive transcription factor ERF023 OS... [more]
ERF15_ARATH1.712e-1346.51Ethylene-responsive transcription factor ERF015 OS... [more]
ERF62_ARATH2.920e-1355.26Ethylene-responsive transcription factor ERF062 OS... [more]
ERF55_ARATH2.920e-1363.33Ethylene-responsive transcription factor ERF055 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675873 ID=EY675873; Name=EY675873; organism=Citrus sinensis; type=EST; length=943bp
CTCATTAACATGTCCCCATGACAACGTTGGAAGAAGAATCATCCATCCTG
GAATTCCTTCGCCAGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCC
AAATCTCTCTTTTCTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAAT
CCGAACCCGACTCCCCTACCTTTTGTGAAATAATAAAACCTGAACCATTG
GACATAACGTGTTTGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGAG
TTCGGAGCCGAAGCTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAG
TAAGAAGAAGGCCGTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCA
AGAAAGGGCAGCAGGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGC
TGCTAAAGCTTATGATTCTGCTGCCTTCCGGATGAGGGGGCGCAAAGCAA
TCTTGAATTTCCCTCTGGAGGCTGGGGCTGATAGCCCTCCAGCAAAGAAC
AGTAGGGAAAGAAAAAAAGAGAAGACACGGGATTTGCAAGAATCACCCAC
CTCAATTACCTAGAAAAATAAGAACCCTTCCCCAAATCCAGGGCCCCCAA
AGGGAAAGGGGCTGGTTATTACCCTTAGGAAAAATTGAATTTTGGCCCCC
CAAAAAAAAAAAAAAGGGGTCTGGGGTTTCCCTTTTAAAAAGTTGGACTG
GGGGGGGCCCCCCAAAAAACCCAAAACCGGGGAAAAATTTTGGGGGTTAA
CCGGGAAAGAAAAAAATTTTTTGGTAACTTTTGTCTATTAATTAAAAACT
TGCGCCGTTTCGGAAAAGGGGGGATTTTTTTTTAAAAAAAAAAAAACACA
AGAGGAAGTTGTCTTGGGGGTGTGGTGGGCTTTTTTTTTTGTTTTTTTTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top