EY675873

Overview
NameEY675873
Unique NameEY675873
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.893e-12
Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 3
Query:  279 ERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRERKKEKTRDLQESPTSIT 560
            + K +RGVR+R WG + AEIR P  K  R+WLGTF++  +AA+AYD AA  M GR A  NFPL        ++   +     T     S +S++
Sbjct:    3 QTKKFRGVRQRHWGSWVAEIRHPLLK-RRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLS 95          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF57_ARATH (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF057 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.893e-12
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 3
Query:  216 GSSNWTESPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            GS   T  P    +  +A T+  K YRGVR+R WGK+ AEIR P  + +R+WLGTF++  +AA AYD AA ++RG  A LNFP
Sbjct:   87 GSHLLTAKPTSMKKIDVA-TKPVKLYRGVRQRQWGKWVAEIRLPKNR-TRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFP 167          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.893e-12
Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 3
Query:  249 SSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            SS+ +  +  ++  YRGVR R WGK+ +EIR+P RK SR+WLGTF +   A +A+D AA  ++G  AILNFP
Sbjct:    5 SSDKEKKENNKQPVYRGVRMRSWGKWVSEIREP-RKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFP 75          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: DRE2D_ARATH (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.893e-12
Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 3
Query:  291 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            Y+GVR+R WGK+ AEIR+P R G+R+WLGTFD+  +AA AYDSAA ++ G +A LN P
Sbjct:   42 YKGVRQRTWGKWVAEIREPNR-GARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLP 98          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: CRF5_ARATH (Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana GN=CRF5 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.893e-12
Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = 3
Query:  126 ESEFPVIKSEPDSPTFC-EIIKPEPLDITCLGSSNWTESPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 461
            +S  P +K   D   FC E  +P+P            +SP  ++E      +    YRGVR+RPWGK+AAEIRDP+ + +R+WLGTF +  +AA  YD AA R++G  A  NF
Sbjct:   49 KSVAPRVKRYVDEIRFCDEDDEPKP------ARKAKKKSPAAAAENGGDLVKSVVKYRGVRQRPWGKFAAEIRDPSSR-TRLWLGTFATAEEAAIGYDRAAIRIKGHNAQTNF 154          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.472e-12
Identity = 39/75 (52.00%), Postives = 50/75 (66.67%), Query Frame = 3
Query:  291 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRERK 515
            YRGVR+R WGK+ AEIR P  + +R+WLGTF++   AA AYD AAF++RG  A LNFP     D  P  +S + K
Sbjct:   71 YRGVRQRHWGKWVAEIRLPKNR-TRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPNLIHEDMNPLPSSVDTK 144          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: RA210_ARATH (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.229e-12
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  264 LADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            +A  +  K Y+G+R R WGK+ AEIR+P  K SR+WLG++ +   AA+AYD+A F +RG  A LNFP
Sbjct:   21 VATRKRDKPYKGIRMRKWGKWVAEIREP-NKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFP 86          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF84_ARATH (Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana GN=ERF084 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.229e-12
Identity = 39/83 (46.99%), Postives = 57/83 (68.67%), Query Frame = 3
Query:  291 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF---PLEAGADSPPAKNSRERKKEKTR 530
            + GVR+RPWG+++AEIRD   +  R WLGTFD+  +AA+AYD+AA R+RG KA  NF   PL     +   +++R R+K+K +
Sbjct:  116 FMGVRKRPWGRWSAEIRDRIGR-CRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNFVIPPLFPKEIAQAQEDNRMRQKQKKK 197          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.229e-12
Identity = 43/109 (39.45%), Postives = 60/109 (55.05%), Query Frame = 3
Query:  231 TESPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF------PLEAGADSPPAKNSRERKKEKTRDLQ 539
            T S Q+  + K      +  YRGVR+R WGK+ AEIR+P RK +R WLGTF +  DAA+AYD AA  + G +A LN        + + + S  A +S       T+ L+
Sbjct:   35 TSSAQRKRKGKGGPDNSKFRYRGVRQRSWGKWVAEIREP-RKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPSSPSSVSSSSSSVSAASSPSTSSSSTQTLR 142          
BLAST of EY675873 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.507e-12
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 3
Query:  216 GSSNWTESPQKSSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 464
            G S+ T++ QK          ++ ++RGVR R WGK+ +EIR+P RK SR+WLGTF +   AA+A+D AA  ++G  A LNFP
Sbjct:   22 GKSSKTKNEQKG-------VSKQPNFRGVRMRQWGKWVSEIREP-RKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFP 96          
The following BLAST results are available for this feature:
BLAST of EY675873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
WIN1_ARATH1.893e-1240.43Ethylene-responsive transcription factor WIN1 OS=A... [more]
ERF57_ARATH1.893e-1249.40Ethylene-responsive transcription factor ERF057 OS... [more]
ERF43_ARATH1.893e-1250.00Ethylene-responsive transcription factor ERF043 OS... [more]
DRE2D_ARATH1.893e-1260.34Dehydration-responsive element-binding protein 2D ... [more]
CRF5_ARATH1.893e-1240.71Ethylene-responsive transcription factor CRF5 OS=A... [more]
ERF56_ARATH2.472e-1252.00Ethylene-responsive transcription factor ERF056 OS... [more]
RA210_ARATH3.229e-1250.75Ethylene-responsive transcription factor RAP2-10 O... [more]
ERF84_ARATH3.229e-1246.99Ethylene-responsive transcription factor ERF084 OS... [more]
ABI4_ARATH3.229e-1239.45Ethylene-responsive transcription factor ABI4 OS=A... [more]
ERF39_ARATH5.507e-1245.78Ethylene-responsive transcription factor ERF039 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675873 ID=EY675873; Name=EY675873; organism=Citrus sinensis; type=EST; length=943bp
CTCATTAACATGTCCCCATGACAACGTTGGAAGAAGAATCATCCATCCTG
GAATTCCTTCGCCAGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCC
AAATCTCTCTTTTCTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAAT
CCGAACCCGACTCCCCTACCTTTTGTGAAATAATAAAACCTGAACCATTG
GACATAACGTGTTTGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGAG
TTCGGAGCCGAAGCTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAG
TAAGAAGAAGGCCGTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCA
AGAAAGGGCAGCAGGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGC
TGCTAAAGCTTATGATTCTGCTGCCTTCCGGATGAGGGGGCGCAAAGCAA
TCTTGAATTTCCCTCTGGAGGCTGGGGCTGATAGCCCTCCAGCAAAGAAC
AGTAGGGAAAGAAAAAAAGAGAAGACACGGGATTTGCAAGAATCACCCAC
CTCAATTACCTAGAAAAATAAGAACCCTTCCCCAAATCCAGGGCCCCCAA
AGGGAAAGGGGCTGGTTATTACCCTTAGGAAAAATTGAATTTTGGCCCCC
CAAAAAAAAAAAAAAGGGGTCTGGGGTTTCCCTTTTAAAAAGTTGGACTG
GGGGGGGCCCCCCAAAAAACCCAAAACCGGGGAAAAATTTTGGGGGTTAA
CCGGGAAAGAAAAAAATTTTTTGGTAACTTTTGTCTATTAATTAAAAACT
TGCGCCGTTTCGGAAAAGGGGGGATTTTTTTTTAAAAAAAAAAAAACACA
AGAGGAAGTTGTCTTGGGGGTGTGGTGGGCTTTTTTTTTTGTTTTTTTTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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