EY675869

Overview
NameEY675869
Unique NameEY675869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN8_RAT (Calpain-8 OS=Rattus norvegicus GN=Capn8 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 2
Query:   83 IVEGPPYIILQVREVDGH----KLVQIRNPWANELEWNGPWSDSSPEWT---DRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYS---------VHGQW-RGYSAGGCQDY-ASWNQNPQFRLRASGSD 451
            +V+G  Y +  V EV+ H    KL+++RNPW  E+EW+G WSD++PEW     R K +L    +++DG FWMS+ DF   +  + +C + P  +             +G+W RG +AGGC +Y  ++  NPQF++     D
Sbjct:  258 LVKGHAYSVTGVEEVNFHGRPEKLIRLRNPWG-EVEWSGAWSDNAPEWNYIDPRRKEELD--KKAEDGEFWMSFSDFLKQYSRLEICNLSPDSLSSEEIHKWNLVLFNGRWTRGSTAGGCLNYPGTYWTNPQFKIHLDEVD 395          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN2_HUMAN (Calpain-2 catalytic subunit OS=Homo sapiens GN=CAPN2 PE=1 SV=5)

HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16
Identity = 51/166 (30.72%), Postives = 84/166 (50.60%), Query Frame = 2
Query:    5 GRVRDSRVDPSSGESSRTP*KICFSGIVEGPPYIILQVREVDGH----KLVQIRNPWANELEWNGPWSDSSPEW-TDRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQW----------RGYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            G +    +D +S   S     I F  +V+G  Y +    EV+ +    KL++IRNPW  E+EW G W+D+ P W T   + + +   + +DG FWMS+ DF  H+  + +C + P  +    + +W          RG +AGGC++Y +  W  NPQ+ ++    D
Sbjct:  235 GSLLGCSIDITSAADSEA---ITFQKLVKGHAYSVTGAEEVESNGSLQKLIRIRNPWG-EVEWTGRWNDNCPSWNTIDPEERERLTRRHEDGEFWMSFSDFLRHYSRLEICNLTPDTLTSDTYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW-MNPQYLIKLEEED 395          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN1_RAT (Calpain-1 catalytic subunit OS=Rattus norvegicus GN=Capn1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16
Identity = 50/149 (33.56%), Postives = 81/149 (54.36%), Query Frame = 2
Query:   68 ICFSGIVEGPPYIILQVREV--DGHK--LVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHV-PQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQW----------RGYSAGGCQDY-ASWNQNPQFRLRASGSDASFAY 466
            I F  +V G  Y +   ++V   G +  L+++RNPW  E+EW GPWSD+S EW     ++ + +  + +DG FWMS++DF   F  + +C + P  ++      W          RG +AGGC++Y A++  NPQF++R    D +  Y
Sbjct:  263 ITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWG-EVEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTPDALKSRTLRNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDADDY 410          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN1_PONAB (Calpain-1 catalytic subunit OS=Pongo abelii GN=CAPN1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 2
Query:   68 ICFSGIVEGPPYIILQVREVDGH----KLVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHVP-QSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQW----------RGYSAGGCQDY-ASWNQNPQFRLRASGSD 451
            I F  +V+G  Y +   ++V+       L+++RNPW  E+EW G WSDSS EW +   ++   +  + +DG FWMS++DF   F  + +C + P  ++     +W          RG +AGGC++Y A++  NPQF++R   +D
Sbjct:  263 ITFKKLVKGHAYSVTGAKQVNYRGQMVSLIRMRNPWG-EVEWTGAWSDSSSEWNNVDPYERDQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPDALKSRTIRKWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLDETD 405          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN1_HUMAN (Calpain-1 catalytic subunit OS=Homo sapiens GN=CAPN1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 2
Query:   68 ICFSGIVEGPPYIILQVREVDGH----KLVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHVP-QSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQW----------RGYSAGGCQDY-ASWNQNPQFRLRASGSD 451
            I F  +V+G  Y +   ++V+       L+++RNPW  E+EW G WSDSS EW +   ++   +  + +DG FWMS++DF   F  + +C + P  ++     +W          RG +AGGC++Y A++  NPQF++R   +D
Sbjct:  263 ITFKKLVKGHAYSVTGAKQVNYRGQVVSLIRMRNPWG-EVEWTGAWSDSSSEWNNVDPYERDQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPDALKSRTIRKWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLDETD 405          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN3_RAT (Calpain-3 OS=Rattus norvegicus GN=Capn3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.083e-16
Identity = 60/173 (34.68%), Postives = 93/173 (53.76%), Query Frame = 2
Query:   11 VRDSRVDPSSGES--SRTP*KICFS-----GIVEGPPYIILQVREV----DGHKLVQIRNPWANELEWNGPWSDSSPEWT---DRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMR--------YSVH-GQW-RGYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            +RDS +DP + +   SRT   + +      G+V+G  Y +  + E     +  KLV++RNPW  ++EWNG WSD   +W+      K +L+H   ++DG FWMS+ DF  HF  + +C +    +          SV+ G+W RG SAGGC+++    W  NPQ+RL+    D
Sbjct:  299 LRDSDLDPRASDDRPSRTIVPVQYETRMACGLVKGHAYSVTGLEEALFKGEKVKLVRLRNPWG-QVEWNGSWSDGWKDWSFVDKDEKARLQH-QVTEDGEFWMSYDDFVYHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWT-NPQYRLKLLEED 468          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN3_MOUSE (Calpain-3 OS=Mus musculus GN=Capn3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.083e-16
Identity = 61/173 (35.26%), Postives = 92/173 (53.18%), Query Frame = 2
Query:   11 VRDSRVDP--SSGESSRTP*KICFS-----GIVEGPPYIILQVREV----DGHKLVQIRNPWANELEWNGPWSDSSPEWT---DRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMR--------YSVH-GQW-RGYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            +RDS +DP  S    SRT   + +      G+V+G  Y +  + E     +  KLV++RNPW  ++EWNG WSD   +W+      K +L+H   ++DG FWMS+ DF  HF  + +C +    +          SV+ G+W RG SAGGC+++    W  NPQ+RL+    D
Sbjct:  299 LRDSDLDPRGSDDRPSRTIVPVQYETRMACGLVKGHAYSVTGLEEALFKGEKVKLVRLRNPWG-QVEWNGSWSDGWKDWSFVDKDEKARLQH-QVTEDGEFWMSYDDFVYHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWT-NPQYRLKLLEED 468          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN3_PIG (Calpain-3 OS=Sus scrofa GN=CAPN3 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 62/175 (35.43%), Postives = 93/175 (53.14%), Query Frame = 2
Query:    8 RVRDSRVDP---SSGESSRTP*KICFS-----GIVEGPPYIILQVREV----DGHKLVQIRNPWANELEWNGPWSDSSPEWT---DRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMR--------YSVH-GQW-RGYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            R+RDS + P   S    +RT   + F      G+V+G  Y +  + E     +  KLV++RNPW  ++EWNG WSDS  +W+      K +L+H   ++DG FWMS+ DF  HF  + +C +    +          SV+ G+W RG SAGGC+++    W  NPQ+RL+    D
Sbjct:  297 RLRDSDLIPEGCSDDRPTRTIVPVQFETRMACGLVKGHAYSVTGLEEALFKGEKVKLVRLRNPWG-QVEWNGSWSDSWKDWSFVDKDEKARLQH-QVTEDGEFWMSYDDFIYHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWT-NPQYRLKLLEED 468          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN2_MACFA (Calpain-2 catalytic subunit OS=Macaca fascicularis GN=CAPN2 PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    5 GRVRDSRVDPSSGESSRTP*KICFSGIVEGPPYIILQVREVDG----HKLVQIRNPWANELEWNGPWSDSSPEW-TDRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQW----------RGYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            G +    +D +S   S     I +  +V+G  Y +    EV+      KL++IRNPW  E+EW G W+D+ P W T   + + +   + +DG FWMS+ DF  H+  + +C + P  +    + +W          RG +AGGC++Y +  W  NPQ+ ++    D
Sbjct:  235 GSLLGCSIDITSAADSEA---ITYQKLVKGHAYSVTGAEEVESSGSLQKLIRIRNPWG-EVEWTGRWNDNCPSWNTIDPEERERLTRRHEDGEFWMSFSDFLRHYSRLEICNLTPDTLTSDTYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW-MNPQYLIKLEEED 395          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN2_BOVIN (Calpain-2 catalytic subunit OS=Bos taurus GN=CAPN2 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 52/168 (30.95%), Postives = 82/168 (48.81%), Query Frame = 2
Query:    5 GRVRDSRVDPSSGESSRTP*KICFSGIVEGPPYIILQVREVDGH----KLVQIRNPWANELEWNGPWSDSSPEWTD---RMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQW----------RGYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            G +    +D +S   S     I F  +V+G  Y +    EV+      KL++IRNPW  E+EW G W+D+ P W      ++  L    Q +DG FWMS+ DF  H+  + +C + P  +    + +W          RG +AGGC++Y +  W  NPQ+ ++    D
Sbjct:  235 GSLLGCSIDITSAADSEA---ITFQKLVKGHAYSVTGAEEVESRGSLQKLIRIRNPWG-EVEWTGQWNDNCPNWNTVDPEVRETLTR--QHEDGEFWMSFNDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW-MNPQYLIKLEEED 395          
The following BLAST results are available for this feature:
BLAST of EY675869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CAN8_RAT1.221e-1635.46Calpain-8 OS=Rattus norvegicus GN=Capn8 PE=2 SV=1[more]
CAN2_HUMAN1.221e-1630.72Calpain-2 catalytic subunit OS=Homo sapiens GN=CAP... [more]
CAN1_RAT1.221e-1633.56Calpain-1 catalytic subunit OS=Rattus norvegicus G... [more]
CAN1_PONAB1.221e-1633.33Calpain-1 catalytic subunit OS=Pongo abelii GN=CAP... [more]
CAN1_HUMAN1.221e-1633.33Calpain-1 catalytic subunit OS=Homo sapiens GN=CAP... [more]
CAN3_RAT2.083e-1634.68Calpain-3 OS=Rattus norvegicus GN=Capn3 PE=2 SV=1[more]
CAN3_MOUSE2.083e-1635.26Calpain-3 OS=Mus musculus GN=Capn3 PE=2 SV=1[more]
CAN3_PIG3.554e-1635.43Calpain-3 OS=Sus scrofa GN=CAPN3 PE=2 SV=2[more]
CAN2_MACFA3.554e-1630.12Calpain-2 catalytic subunit OS=Macaca fascicularis... [more]
CAN2_BOVIN3.554e-1630.95Calpain-2 catalytic subunit OS=Bos taurus GN=CAPN2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-A09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675869 ID=EY675869; Name=EY675869; organism=Citrus sinensis; type=EST; length=919bp
TCCGGGTCGGGTCCGGGATTCCCGGGTCGACCCCTCGTCCGGGGAGTCCT
CACGCACCCCTTAAAAGATTTGTTTTAGTGGTATAGTGGAAGGCCCCCCC
TATATAATTCTACAGGTGAGGGAGGTGGATGGCCACAAGCTTGTTCAAAT
TCGAAATCCATGGGCTAATGAACTTGAATGGAATGGCCCCTGGTCTGATT
CGTCACCTGAATGGACTGACAGGATGAAACACAAGCTAAAACATGTTCCG
CAGTCAAAAGATGGTATATTCTGGATGTCCTGGCAAGATTTTCAGATTCA
CTTTCGATCAATATATGTCTGCCGTGTTTATCCGTCCGAGATGCGCTATT
CTGTGCACGGCCAATGGCGTGGTTACAGTGCAGGTGGTTGCCAAGATTAT
GCTTCATGGAATCAAAATCCTCAGTTCCGATTGAGGGCCTCTGGATCGGA
TGCATCATTTGCCTATTCATGTTTTCATTACCTTGACCCAAGGTGTGAGT
TTCCCAAGAAAGGTTGGTGGGTTTTAAAAATTATCAATCCAGTCACGAAT
CTATGAAGTTCCTATATTGGGAAGAAGAAACCGAAAAATCGGGGGCGCCC
GGCTCCTCACAATTTTACCCACTTAATCCAGTTGTGGGAACAAATATTTA
AATTCCCCGGGAAATTTCTTGGGGAAAAGGGTACGGGATCCGAACCAAAG
GGCTACCCAAAATTGCCTAACACCCTAACACCCCTGGGGAAAAAACCACC
TTTTGTTTCTTTTTGGGTTTACCAAAAAAAAAAAATTATCCAGGAAAGCT
TTTATTAAAAAAGGGGTGGGGCTTCTTTATTTTAAATTTTTATAACCTTT
TGGGAATATTATAATGGGGGTTACAGAATAATTTTTGGGGGGGGTGCCTG
GGGAAAACCCCAATAAAAA
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